mRNA_P-wetherbeei_contig6326.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6326.1.1 vs. uniprot
Match: A0A7R9UI75_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UI75_DIALT) HSP 1 Score: 95.1 bits (235), Expect = 3.800e-19 Identity = 49/87 (56.32%), Postives = 61/87 (70.11%), Query Frame = 2
Query: 116 HVVRLYP*NGLPSCHP-LLSLFHFGLAQAGYTAFSVGLVNNKMVLIPIMELVATSPRFMDPHGRTWERVLSTTLQPNTVPPKASKKP 373
+++R P N S + LL+ A AGYTAFSVG+ NN++V IPI +V SPR MDPHG+TWERV+S T QPNTVPPKA K+P
Sbjct: 214 YMIRSVPANAADSIYTELLAQNVVHGAMAGYTAFSVGMRNNRLVYIPIGAMVKNSPRQMDPHGQTWERVISVTRQPNTVPPKAKKEP 300
BLAST of mRNA_P-wetherbeei_contig6326.1.1 vs. uniprot
Match: A0A8J6CDG3_DIALT (PFK domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDG3_DIALT) HSP 1 Score: 95.1 bits (235), Expect = 2.490e-18 Identity = 49/87 (56.32%), Postives = 61/87 (70.11%), Query Frame = 2
Query: 116 HVVRLYP*NGLPSCHP-LLSLFHFGLAQAGYTAFSVGLVNNKMVLIPIMELVATSPRFMDPHGRTWERVLSTTLQPNTVPPKASKKP 373
+++R P N S + LL+ A AGYTAFSVG+ NN++V IPI +V SPR MDPHG+TWERV+S T QPNTVPPKA K+P
Sbjct: 466 YMIRSVPANAADSIYTELLAQNVVHGAMAGYTAFSVGMRNNRLVYIPIGAMVKNSPRQMDPHGQTWERVISVTRQPNTVPPKAKKEP 552
BLAST of mRNA_P-wetherbeei_contig6326.1.1 vs. uniprot
Match: A0A7S1D0X5_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0X5_CYCTE) HSP 1 Score: 92.8 bits (229), Expect = 4.630e-18 Identity = 50/83 (60.24%), Postives = 58/83 (69.88%), Query Frame = 2
Query: 116 HVVRLYP*NGLPS--CHPLLSLFHFGLAQAGYTAFSVGLVNNKMVLIPIMELVATSPRFMDPHGRTWERVLSTTLQPNTVPPK 358
++VR P N S C L G + AGYT FSVGL NN+MVL+PI ELV+TSPR M+P GRTWERVL+ T QPNTVPPK
Sbjct: 249 YMVRSIPANAADSLYCMQLAQNAVHG-SMAGYTGFSVGLCNNRMVLLPIPELVSTSPRSMNPRGRTWERVLAVTRQPNTVPPK 330
BLAST of mRNA_P-wetherbeei_contig6326.1.1 vs. uniprot
Match: A0A7S0AV74_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AV74_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.360e-17 Identity = 48/82 (58.54%), Postives = 55/82 (67.07%), Query Frame = 2
Query: 116 HVVRLYP*NGLPS--CHPLLSLFHFGLAQAGYTAFSVGLVNNKMVLIPIMELVATSPRFMDPHGRTWERVLSTTLQPNTVPP 355
+++R P N S C L G A AG+T FSVGL NNKMV +PI ELV TSPR M+P GRTWERVL+ T QPNTVPP
Sbjct: 125 YMIRSVPANASDSLYCMQLAQNAVHG-AMAGFTGFSVGLCNNKMVFLPIPELVETSPRSMNPRGRTWERVLARTRQPNTVPP 205
BLAST of mRNA_P-wetherbeei_contig6326.1.1 vs. uniprot
Match: A0A7S1Z5G9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z5G9_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.590e-17 Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 2
Query: 191 AQAGYTAFSVGLVNNKMVLIPIMELVATSPRFMDPHGRTWERVLSTTLQPNTVPP 355
A AG+T FSVGL NNKMV +PI ELV+TSPR M P GRTWER+L+ T QPNTVPP
Sbjct: 191 AMAGFTGFSVGLCNNKMVFLPIPELVSTSPRMMSPRGRTWERILAVTRQPNTVPP 245
BLAST of mRNA_P-wetherbeei_contig6326.1.1 vs. uniprot
Match: A0A7S1BFV1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BFV1_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 6.570e-17 Identity = 49/90 (54.44%), Postives = 58/90 (64.44%), Query Frame = 2
Query: 116 HVVRLYP*NGLPS--CHPLLSLFHFGLAQAGYTAFSVGLVNNKMVLIPIMELVATSPRFMDPHGRTWERVLSTTLQPNTVPPKASKKPKI 379
++VR P N S C L G A AGYT FSVGL NN+MV +PI +LV +SPR M+ +GRTWERVL T QPNTVPPK +P I
Sbjct: 142 YMVRSVPANAADSQYCMQLAQNAVHG-AMAGYTGFSVGLCNNRMVYLPIPKLVESSPRKMNAYGRTWERVLQVTRQPNTVPPKDGDEPDI 230
BLAST of mRNA_P-wetherbeei_contig6326.1.1 vs. uniprot
Match: A0A7S3XU18_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU18_HETAK) HSP 1 Score: 90.9 bits (224), Expect = 7.260e-17 Identity = 50/83 (60.24%), Postives = 56/83 (67.47%), Query Frame = 2
Query: 116 HVVRLYP*NGLPSCH-PLLSLFHFGLAQAGYTAFSVGLVNNKMVLIPIMELVATSPRFMDPHGRTWERVLSTTLQPNTVPPKA 361
+++R P N S + LLS A AGYTAFSVGLVNN+MV IP+ L SPR M PHGRTWERVLS T QPNTVPP A
Sbjct: 487 YMIRSVPANSTDSLYCTLLSQNAVHGAMAGYTAFSVGLVNNRMVWIPMPILTDNSPRVMAPHGRTWERVLSATHQPNTVPPDA 569
BLAST of mRNA_P-wetherbeei_contig6326.1.1 vs. uniprot
Match: A0A7S4IZU6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IZU6_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 8.730e-17 Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 2
Query: 191 AQAGYTAFSVGLVNNKMVLIPIMELVATSPRFMDPHGRTWERVLSTTLQPNTVPPKASKK 370
A AG T FSVGLVNN++V +PI +LVATSPR M PHG TWER+++ T QPNT PPK +
Sbjct: 51 AMAGLTGFSVGLVNNRIVYLPIPQLVATSPRTMSPHGTTWERIVAMTGQPNTAPPKVEAR 110
BLAST of mRNA_P-wetherbeei_contig6326.1.1 vs. uniprot
Match: A0A7R9ZCU7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZCU7_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.020e-16 Identity = 50/96 (52.08%), Postives = 58/96 (60.42%), Query Frame = 2
Query: 116 HVVRLYP*NGLPS--CHPLLSLFHFGLAQAGYTAFSVGLVNNKMVLIPIMELVATSPRFMDPHGRTWERVLSTTLQPNTVPPKASKKPKI*SVRRE 397
+ VR P NG S C L G A AG T FSVGLVNN +V +PI +LVATSPR MDPHG TWER+++ T QPNT PK K S +E
Sbjct: 104 YTVRSVPANGADSLYCMQLAQNAVHG-AMAGMTGFSVGLVNNCIVYLPIPQLVATSPRTMDPHGMTWERIVAMTGQPNTASPKEDDDDKEGSAEKE 198
BLAST of mRNA_P-wetherbeei_contig6326.1.1 vs. uniprot
Match: A0A7S4MVW9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVW9_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.030e-16 Identity = 47/87 (54.02%), Postives = 56/87 (64.37%), Query Frame = 2
Query: 116 HVVRLYP*NGLPS--CHPLLSLFHFGLAQAGYTAFSVGLVNNKMVLIPIMELVATSPRFMDPHGRTWERVLSTTLQPNTVPPKASKK 370
+ VR P NG S C L G A AG T FSVGLVNN++V +PI +LVATSPR M PHG TWER+++ T QPNT PPK +
Sbjct: 169 YTVRSVPANGADSLYCMQLAQNAVHG-AMAGLTGFSVGLVNNRIVYLPIPQLVATSPRTMSPHGTTWERIVAMTGQPNTAPPKVEAR 254 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6326.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6326.1.1 >prot_P-wetherbeei_contig6326.1.1 ID=prot_P-wetherbeei_contig6326.1.1|Name=mRNA_P-wetherbeei_contig6326.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=201bp LVYVGSFVITFLLPHFKAARNCLTKELPLPLPLSALRLPCGPAVPVKWSTback to top mRNA from alignment at P-wetherbeei_contig6326:819..1679+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6326.1.1 ID=mRNA_P-wetherbeei_contig6326.1.1|Name=mRNA_P-wetherbeei_contig6326.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=861bp|location=Sequence derived from alignment at P-wetherbeei_contig6326:819..1679+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6326:819..1679+ >mRNA_P-wetherbeei_contig6326.1.1 ID=mRNA_P-wetherbeei_contig6326.1.1|Name=mRNA_P-wetherbeei_contig6326.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig6326:819..1679+ (Phaeothamnion wetherbeei SAG_119_79)back to top |