mRNA_P-wetherbeei_contig6323.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6323.1.1 vs. uniprot
Match: A0A836CKV9_9STRA (Ion transport protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKV9_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 7.430e-20 Identity = 65/187 (34.76%), Postives = 103/187 (55.08%), Query Frame = 1
Query: 7 RYFSNVWNVIDFTLYALLLSGFIMEIAGASQAVINSIDSSAAVLLWFNVLFFLRAFESTGPMVRMILLITWQLRYFLLLLMVVITGFATAFHGLVLGNGGGFNDADS-----------DLIVYKTFPS------SMRTTYGMMLGGPAL------AAPRFSLTIFWAIFMLIVAIVLLNLLIAIVSE 498
YF++ WN++D + YALL G +++ + + +S A+LLWF +L+F+R F STGP++ I I +R FL++L+VV+ GFA AF+ +LG + D + + PS ++R++ MLGG L +AP L++ W ML+V I+LLN+LIAI+SE
Sbjct: 98 EYFTDPWNLLDLSAYALLFIGVAAQVSTRKSLLADCTNSIVALLLWFKLLYFMRPFRSTGPLINTIFEIMADMRTFLVILLVVVVGFANAFYA-ILGRALTEQECDEKSTSTARASCYEKLAAGPSPSFSSPWKAVRSSLSYMLGGYDLDELDAGSAPVL-LSLLWLACMLLVTIILLNVLIAIISE 282
BLAST of mRNA_P-wetherbeei_contig6323.1.1 vs. uniprot
Match: A0A078B321_STYLE (Wd-40 repeat protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078B321_STYLE) HSP 1 Score: 75.9 bits (185), Expect = 6.840e-13 Identity = 63/182 (34.62%), Postives = 93/182 (51.10%), Query Frame = 1
Query: 1 GWRYFSNVWNVID----FTLYALLLSGFIMEIAGASQAVIN-----SIDSSAAVLLWFNVLFFLRAFESTGPMVRMILLITWQLRYFLLLLMVVITGFATAFHGLVLGNGGGFNDADSDLIVYKTFPSSMRTTYGMMLGG------PALAAPRFSLTIFWAIFMLIVAIVLLNLLIAIVSEG 501
G YF +VWN ID F +Y +L I E G S+ N S +L+W L+F R F+ST ++R+I+ + +RYFLL+L++ I GF AF+ V+ NG D D ++ S+ +Y M+LG AL P + + IF + IV+LNLLIAI+S+
Sbjct: 1356 GLEYFKSVWNYIDTLPVFGIYVMLAFALIEEF-GFSEGEFNRPVQRGFISIVTLLMWMKFLYFFRLFDSTSYLIRIIVEVVISMRYFLLVLLMTIIGFGNAFY--VISNGN-VEDPLVDNFFITSYLDSIVFSYRMILGDFNTTEFGALVTPL--CIVLFLIFTVFNMIVMLNLLIAIISDA 1531
BLAST of mRNA_P-wetherbeei_contig6323.1.1 vs. uniprot
Match: J9ICT4_9SPIT (Ion_trans domain-containing protein n=3 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9ICT4_9SPIT) HSP 1 Score: 73.6 bits (179), Expect = 4.330e-12 Identity = 60/178 (33.71%), Postives = 96/178 (53.93%), Query Frame = 1
Query: 1 GWRYFSNVWNVIDFT-----LYALLLSGFIMEIAGASQAVINSIDSSAAVLLWFNVLFFLRAFESTGPMVRMILLITWQLRYFLLLLMVVITGFATAFHGLVLGNGGGFNDADSDLIVYKTFPSSMRTTYGMMLG-------GPALAAPRFSLTIFWAIFMLIVAIVLLNLLIAIVSE 498
GW YF +VWN ID L L+++GF ++++ + + ++ +I +WF L+F R F+S G + R+I+L+ + +++FL++L I F+ +F L L NG ND D D V F S + T Y ++LG G + L I +F I++LNLLIAI+SE
Sbjct: 1411 GWHYFKSVWNYIDIITPVIILSLLVINGFDIKLSYSLERILQAIG---VFFMWFKFLYFFRIFKSFGYLTRLIILVIYDMKHFLVVLFFTIVAFSDSF--LTLSNG---ND-DEDKFVDGFFDSIIYT-YRIILGDFDVTKFGGVGTFMVYGLFILCTVFN---TIIMLNLLIAIISE 1575
BLAST of mRNA_P-wetherbeei_contig6323.1.1 vs. uniprot
Match: A0A8J8TAA2_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8TAA2_HALGN) HSP 1 Score: 72.0 bits (175), Expect = 1.370e-11 Identity = 58/174 (33.33%), Postives = 97/174 (55.75%), Query Frame = 1
Query: 10 YFSNVWNVIDFTLYALLLSGFIMEIAGAS--QAVINSIDSSAAVLLWFNVLFFLRAFESTGPMVRMILLITWQLRYFLLLLMVVITGFATAFHGLVLGNGGGFNDADSDLIVY---KTFPSSMRTTYGMMLGGPALAAP------RFSLTIFWAIFMLIVAIVLLNLLIAIVSE 498
YF + WN IDF ++++ I+ AG +A S+ S + +W +L+FLR ++STG ++RMI+ + ++++ FLLLL++ IT A AF + + + +N V+ K F +++ TY ++LGG LTIF +F++IV +LNLLI+IV E
Sbjct: 521 YFKDPWNYIDFPPPLIVITIAIVSFAGIDSWEAPFKSVGS---LFMWLKLLYFLRLYDSTGYLIRMIVKVIFRMKTFLLLLLITITAVADAFISIQVDDAQEYNGFFG--FVWHRIKIFFAAVTQTYFLILGGDQFTVGDGFEIFATFLTIFSTLFVMIV---MLNLLISIVGE 686
BLAST of mRNA_P-wetherbeei_contig6323.1.1 vs. uniprot
Match: A0A078A120_STYLE (Ion_trans domain-containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A120_STYLE) HSP 1 Score: 72.0 bits (175), Expect = 1.480e-11 Identity = 58/178 (32.58%), Postives = 92/178 (51.69%), Query Frame = 1
Query: 1 GWRYFSNVWNVIDFT-----LYALLLSGFIMEIAGASQAVINSIDSSAAVLLWFNVLFFLRAFESTGPMVRMILLITWQLRYFLLLLMVVITGFATAFHGLVLGNGGGFNDADSDLIVYKTFPSSMRTTYGMMLG-------GPALAAPRFSLTIFWAIFMLIVAIVLLNLLIAIVSE 498
G+ Y S+VWN +D L L ++GF ++I+ SQ + +I +WF L+F R F+S G + R+I+L+ + +R+F+++L + + F+ +F L L NG ND F S+ TY ++LG G + L I +F IV+LNLLIAI+SE
Sbjct: 1419 GFMYLSSVWNYLDIITPVIILTLLTINGFNIDISRNSQRIFQAIG---VFFMWFKFLYFFRIFKSFGYLTRLIILVVYDMRHFMVVLFITLVAFSDSF--LTLSNGNEENDQ-----FVHGFYDSIIYTYRIILGDFNVEKFGSVGTQLVYGLFILCTMFN---TIVMLNLLIAIISE 1583
BLAST of mRNA_P-wetherbeei_contig6323.1.1 vs. uniprot
Match: F2USX8_SALR5 (Nudt9 protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2USX8_SALR5) HSP 1 Score: 70.1 bits (170), Expect = 6.870e-11 Identity = 55/177 (31.07%), Postives = 92/177 (51.98%), Query Frame = 1
Query: 7 RYFSNVWNVIDFTLYALLLSGFIMEIAGASQAVINSIDSSAAVLLWFNVLFFLRAFESTGPMVRMILLITWQLRYFLLLLMVVITGFATAFHGLVLGNGGG------FNDADSDLIVYKTFPSSMRTTYGMMLGGPAL------AAPRFSLTIFWAIFMLIVAIVLLNLLIAIVSEG 501
RYFSN+WN +D AL LS I+ + G +QA ++ + A ++ W +L+FL F+STGP++ MIL I FL++L+ V+ G + + L+ + G F AD + ++ T+ M+L G ++ S + + M + ++LLNLLIAI+S+
Sbjct: 986 RYFSNIWNWLDMARAALTLSFCILHLQGDTQA--RTLLAYAVIVQWLRLLYFLLPFDSTGPLIIMILEILKDTYVFLIVLVTVVLGASNSLFVLLHHSSSGVASTSSFASADG----FSDVALALFTSANMLLFGDYDQTLFDDSSDGISARVIFVAVMFVTLVILLNLLIAILSDS 1156
BLAST of mRNA_P-wetherbeei_contig6323.1.1 vs. uniprot
Match: A0A078AU73_STYLE (Wd-40 repeat protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AU73_STYLE) HSP 1 Score: 68.2 bits (165), Expect = 3.180e-10 Identity = 56/172 (32.56%), Postives = 90/172 (52.33%), Query Frame = 1
Query: 7 RYFSNVWNVIDFTLYALLLSGFIMEIAGASQAVINSIDSSAAVLLWFNVLFFLRAFESTGPMVRMILLITWQLRYFLLLLMVVITGFATAFHGLVLGNGGGFNDADSDLIVYKTFPSSMRTTYGMMLGGPALAAPRFSLTI----FWAIFML---IVAIVLLNLLIAIVSEG 501
YFS++WN D ++ I + ++I S A++ +WF L+FLR ++ TG ++RMI+ + +R F ++L+VV+ FA AF L L N N + F S++ +Y LG A ++ ++ W IF+L +V IV+LNLLIAI+SE
Sbjct: 1351 EYFSSIWNYFDIIPPIVIPLIVIQDFLRVKYDFQHTIHSFASMFMWFKFLYFLRIYKETGYLIRMIVEVVKDMRIFFVVLIVVLCAFADAF--LSLSNA---NSDEKVQFAGTDFFSALLYSYRTSLGD--FQAESYNDSVQGLSVWIIFLLSTILVLIVMLNLLIAIISES 1515
BLAST of mRNA_P-wetherbeei_contig6323.1.1 vs. uniprot
Match: A0A7S3KC68_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KC68_EUPCR) HSP 1 Score: 67.0 bits (162), Expect = 4.690e-10 Identity = 55/169 (32.54%), Postives = 85/169 (50.30%), Query Frame = 1
Query: 10 YFSNVWNVIDFTLYALLLSGFIMEIAGASQAVINSIDSSAAVLLWFNVLFFLRAFESTGPMVRMILLITWQLRYFLLLLMVVITGFATAFHGLVLGNGGGFNDADSDLIVYKTFPSSMRTTYGMMLGGPALAAPRFS------LTIFWAIFMLIVAIVLLNLLIAIVSE 498
Y + WN++D + IM+ GA N I + A ++L+F + +FLR F ST +VRMI+ I +++F+ +LM+ F AF+ L G N D + + F ++ +Y M LG F L IF+ + LIV IVLLNL+IAI+ +
Sbjct: 47 YVKSFWNLLDLLTVVTNTAVVIMDYTGAHFHDKNRISAMAVLILYFKLFYFLRIFSSTAYLVRMIIEILKDMKFFVTVLMLATIAFGNAFYIL------GRNSPDGENLAGDNFIDALIFSYKMGLGD--FLTDDFGTRDEEILWIFFLVNTLIVLIVLLNLIIAIMGD 207
BLAST of mRNA_P-wetherbeei_contig6323.1.1 vs. uniprot
Match: A0A7S1XMJ4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMJ4_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 5.100e-10 Identity = 58/194 (29.90%), Postives = 98/194 (50.52%), Query Frame = 1
Query: 16 SNVWNVIDFTLYALLLSGFIMEIA---------GASQAVINSIDSS---AAVLL---WFNVLFFLRAFESTGPMVRMILLITWQLRYFLLLLMVVITGFATAFHGLVLGNGG-------GFNDADSDLIVYKTFPSSMRTTYGMMLG-----------GPALAAPRFSLTIFWAIFMLIVAIVLLNLLIAIVSE 498
++W+ +D +L+ + ++A GA +V +S AA+ L WF LFF+ +E +G ++RM+L I++ +R+FL++L+ ++GFA +F+ L G G + + Y + S+M T +G+MLG P+L A F L FM++V IV LNLLIAI+ +
Sbjct: 221 GDLWDALDVVTLGGMLAVVVTQLAELAIGIYGRGAPLSVAEDFPASSILAALALPVAWFTSLFFMLGYEQSGKLIRMVLEISYGIRWFLIVLLATLSGFAFSFYALYQAGTGTVELPEVGPYEVSDGVFGYDSPYSAMLTGFGLMLGDFDMQEFGGSVNPSLTAALFVL------FMVLVNIVYLNLLIAIMGD 408
BLAST of mRNA_P-wetherbeei_contig6323.1.1 vs. uniprot
Match: F2U270_SALR5 (WD-40 repeat protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U270_SALR5) HSP 1 Score: 66.6 bits (161), Expect = 1.070e-9 Identity = 55/170 (32.35%), Postives = 84/170 (49.41%), Query Frame = 1
Query: 1 GWRYFSNVWNVIDFTLYALLLSGFIMEIAGASQAVINSIDSSAAVLLWFNVLFFLRAFESTGPMVRMILLITWQLRYFLLLLMVVITGFATAFHGLVLGNGG--GFND-ADSDLIVYKTFPSSMRTTYGMMLGGPALAAPRFSLTIFWAIFMLIVAIVLLNLLIAIVSEG 501
G Y +VWN +D + G I A + + + + WF +LFFL+AF STGP+VRM++ I +R+FLL+L + + A F LV G+ D AD L +++ S G + L + W + M++V IVLLNLLIA++S+
Sbjct: 1014 GLYYLKSVWNWLDMLRIIMSYVGVIALFVDAHKTS-RFFFAIGSYVFWFGILFFLQAFSSTGPLVRMVIEIMVGMRWFLLVLGIALLATANVFVLLVEETPAPNGYEDVADVLLTMFRLLMLSDLELLNFSAGSYTIP-----LKLVWVLTMILVPIVLLNLLIALMSDS 1177 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6323.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6323.1.1 >prot_P-wetherbeei_contig6323.1.1 ID=prot_P-wetherbeei_contig6323.1.1|Name=mRNA_P-wetherbeei_contig6323.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp GWRYFSNVWNVIDFTLYALLLSGFIMEIAGASQAVINSIDSSAAVLLWFNback to top mRNA from alignment at P-wetherbeei_contig6323:1230..2588+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6323.1.1 ID=mRNA_P-wetherbeei_contig6323.1.1|Name=mRNA_P-wetherbeei_contig6323.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1359bp|location=Sequence derived from alignment at P-wetherbeei_contig6323:1230..2588+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6323:1230..2588+ >mRNA_P-wetherbeei_contig6323.1.1 ID=mRNA_P-wetherbeei_contig6323.1.1|Name=mRNA_P-wetherbeei_contig6323.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig6323:1230..2588+ (Phaeothamnion wetherbeei SAG_119_79)back to top |