prot_P-wetherbeei_contig6319.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6319.4.1
Unique Nameprot_P-wetherbeei_contig6319.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length46
Homology
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BLAST of mRNA_P-wetherbeei_contig6319.4.1 vs. uniprot
Match: A0A836CA01_9STRA (Tudor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA01_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.380e-12
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0 
Query:    1 PLYKTLKVGDSVEAQYTADDVWYPAEILQAIHSGYPVAKYKVCYT 45
            PLY  LK+GD+VEAQYT DD WY A++LQ IHSGY + K KV YT
Sbjct:  568 PLYARLKLGDAVEAQYTEDDTWYAAKVLQVIHSGYSICKVKVEYT 612
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6319.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CA01_9STRA1.380e-1266.67Tudor domain-containing protein n=1 Tax=Tribonema ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 3..46
e-value: 3.2E-7
score: 32.0
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 5..36
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 5..46
score: 9.374221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6319contigP-wetherbeei_contig6319:3170..3307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6319.4.1mRNA_P-wetherbeei_contig6319.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6319 3170..3307 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6319.4.1 ID=prot_P-wetherbeei_contig6319.4.1|Name=mRNA_P-wetherbeei_contig6319.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=46bp
PLYKTLKVGDSVEAQYTADDVWYPAEILQAIHSGYPVAKYKVCYTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor