mRNA_P-wetherbeei_contig6319.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6319.2.1
Unique NamemRNA_P-wetherbeei_contig6319.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6319.2.1 vs. uniprot
Match: A0A7S1ZQU7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZQU7_TRICV)

HSP 1 Score: 98.2 bits (243), Expect = 3.120e-24
Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = 1
Query:    1 WNKDRQLVALRAHCTAAFYATFKEGIDAYIAGEWPRARESLERADDIMVQRKGPEGDGPSKTILAYMRNREFQAPASWKGFRELTSK 261
            W  D  LV LR   T  F + F+EG+D Y+ G W +AR +LE+AD++M       GDGPS+TIL YM+ R +Q P  WKG+R LTSK
Sbjct:   67 WKVDEDLVQLRRLATPEFRSVFREGVDCYLGGNWNKARTTLEKADEMMKSNGNRNGDGPSRTILRYMKARGWQVPEDWKGYRPLTSK 153          
BLAST of mRNA_P-wetherbeei_contig6319.2.1 vs. uniprot
Match: A0A7S4T6F7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T6F7_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 3.210e-22
Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = 1
Query:    1 WNKDRQLVALRAHCTAAFYATFKEGIDAYIAGEWPRARESLERADDIMVQRKGPEGDGPSKTILAYMRNREFQAPASWKGFRELTSK 261
            W  D+ L+ LR   T AF   F EGI +Y+ G W RARE LE+A+ IM +     GDGPS+TIL YMRNR +  P+ WKG+R LTSK
Sbjct:  164 WEHDQDLIQLRRLSTPAFNKAFNEGISSYLGGNWNRARECLEQANMIMSESDSI-GDGPSQTILNYMRNRSWTCPSEWKGYRPLTSK 249          
BLAST of mRNA_P-wetherbeei_contig6319.2.1 vs. uniprot
Match: A0A7S2XZQ2_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZQ2_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.520e-20
Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 1
Query:    1 WNKDRQLVALRAHCTA-AFYATFKEGIDAYIAGEWPRARESLERADDIMVQRKGPEGDGPSKTILAYMRNREFQAPASWKGFRELTSK 261
            W  D +L  LR H ++ AF   F EG++AYI+G+W +AR +LE  +D++ +  G   DGPS T+L+YM NR F  P  W G+RELTSK
Sbjct:  143 WESDAELKQLRIHHSSEAFEKAFAEGVNAYISGDWKKARANLENCNDMLSELGG---DGPSNTLLSYMGNRNFVCPEGWSGYRELTSK 227          
BLAST of mRNA_P-wetherbeei_contig6319.2.1 vs. uniprot
Match: A0A6V1SCN3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SCN3_HETAK)

HSP 1 Score: 81.6 bits (200), Expect = 1.330e-16
Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 1
Query:    1 WNKDRQLVALRAHCTAAFYATFKEGIDAYIAGEWPRARESLERADDIMVQRKGPEGDGPSKTILAYMRNREFQAPASWKGFRELTSK 261
            W  D  L+ LR H +  F   F+EG+ AYI G+W ++R + ERA  +  +  G   DGP KT+L++M   EF  P  WKG+R LT+K
Sbjct:  218 WETDADLLNLRRHTSEDFDKAFREGMQAYIQGDWQKSRSAFERATAMKAEIGG---DGPCKTLLSFMSGHEFICPEDWKGYRPLTNK 301          
BLAST of mRNA_P-wetherbeei_contig6319.2.1 vs. uniprot
Match: A0A6V1S9U5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S9U5_HETAK)

HSP 1 Score: 81.6 bits (200), Expect = 1.870e-16
Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 1
Query:    1 WNKDRQLVALRAHCTAAFYATFKEGIDAYIAGEWPRARESLERADDIMVQRKGPEGDGPSKTILAYMRNREFQAPASWKGFRELTSK 261
            W  D  L+ LR H +  F   F+EG+ AYI G+W ++R + ERA  +  +  G   DGP KT+L++M   EF  P  WKG+R LT+K
Sbjct:  253 WETDADLLNLRRHTSEDFDKAFREGMQAYIQGDWQKSRSAFERATAMKAEIGG---DGPCKTLLSFMSGHEFICPEDWKGYRPLTNK 336          
BLAST of mRNA_P-wetherbeei_contig6319.2.1 vs. uniprot
Match: K0TBI2_THAOC (Guanylate cyclase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBI2_THAOC)

HSP 1 Score: 81.3 bits (199), Expect = 5.200e-16
Identity = 39/87 (44.83%), Postives = 49/87 (56.32%), Query Frame = 1
Query:    1 WNKDRQLVALRAHCTAAFYATFKEGIDAYIAGEWPRARESLERADDIMVQRKGPEGDGPSKTILAYMRNREFQAPASWKGFRELTSK 261
            W  D  L  LR   T  F  TF +G++ YI G W  AR  +E AD +M       GDGPS+T+LAYM + +F+ P  W G R LTSK
Sbjct: 1332 WTSDPDLTQLRCLATRQFTTTFAQGLENYIGGRWEEARLCMEEADRMMAS-NDIGGDGPSRTLLAYMGSLDFRCPPDWDGHRPLTSK 1417          
BLAST of mRNA_P-wetherbeei_contig6319.2.1 vs. uniprot
Match: A0A835ZG93_9STRA (Guanylate cyclase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG93_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 3.550e-13
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 1
Query:   76 IDAYIAGEWPRARESLERADDIMVQRKGPEGDGPSKTILAYMRNREFQAPASWKGFRELTSK 261
            I  Y+AG+W RAR SLE AD + V+     GDGP++T+LAYM   +F++P  W+G+REL SK
Sbjct:  737 IGLYLAGDWKRARVSLEEADRLKVEVGCSGGDGPARTLLAYMLTHKFKSPVEWRGYRELDSK 798          
BLAST of mRNA_P-wetherbeei_contig6319.2.1 vs. uniprot
Match: A0A2P6U1W3_CHLSO (Adenylate and guanylate cyclase catalytic domain-containing n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U1W3_CHLSO)

HSP 1 Score: 69.7 bits (169), Expect = 5.960e-12
Identity = 34/73 (46.58%), Postives = 42/73 (57.53%), Query Frame = 1
Query:   46 AAFYATFKEGIDAYIAGEWPRARESLERADDIMVQRKG-PEGDGPSKTILAYMRNREFQAPASWKGFRELTSK 261
            A F A F +G +AY  G+WP AR   E    +   R+G P  DGPS T+L  M    +QAPA W G+RELT K
Sbjct: 1160 ADFLAKFTQGFEAYRDGDWPAARAVFEETVAMRRNRRGDPVSDGPSATLLRVMAEHNYQAPAGWAGYRELTEK 1232          
BLAST of mRNA_P-wetherbeei_contig6319.2.1 vs. uniprot
Match: G0R5N9_ICHMG (Guanylate cyclase domain-containing protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0R5N9_ICHMG)

HSP 1 Score: 65.1 bits (157), Expect = 2.490e-10
Identity = 32/86 (37.21%), Postives = 46/86 (53.49%), Query Frame = 1
Query:    4 NKDRQLVALRAHCTAAFYATFKEGIDAYIAGEWPRARESLERADDIMVQRKGPEGDGPSKTILAYMRNREFQAPASWKGFRELTSK 261
            N+ + L  + +     F   FKEG   Y+ G+W  ++E +  A  +         DGPSKT+L +M   +F APA+W GFRELT K
Sbjct:  814 NEIKDLRMIFSKRNPEFQKIFKEGFQNYLKGKWKESKECIINAQKLN------HNDGPSKTLLDFMGQYQFNAPANWSGFRELTEK 893          
BLAST of mRNA_P-wetherbeei_contig6319.2.1 vs. uniprot
Match: A0A5D6YAI8_9STRA (Guanylate cyclase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAI8_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.180e-9
Identity = 27/85 (31.76%), Postives = 45/85 (52.94%), Query Frame = 1
Query:    1 WNKDRQLVALRAHCTAAFYATFKEGIDAYIAGEWPRARESLERADDIMVQRKGPEGDGPSKTILAYMRNREFQAPASWKGFRELT 255
            +  D + + +R     AF  +    ++AY+AG+WP+AR  L  A  I  Q      DGP K ++  +++  F+ P  WKG+R +T
Sbjct:  775 FENDPEYMEIREGLEPAFLESAASAVEAYLAGDWPKARHYLAHAQQIRPQ------DGPCKYLMGVLKDNNFETPQDWKGYRHVT 853          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6319.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1ZQU7_TRICV3.120e-2449.43Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4T6F7_9STRA3.210e-2252.87Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2XZQ2_9STRA3.520e-2047.73Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A6V1SCN3_HETAK1.330e-1642.53Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6V1S9U5_HETAK1.870e-1642.53Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K0TBI2_THAOC5.200e-1644.83Guanylate cyclase domain-containing protein n=1 Ta... [more]
A0A835ZG93_9STRA3.550e-1351.61Guanylate cyclase domain-containing protein n=1 Ta... [more]
A0A2P6U1W3_CHLSO5.960e-1246.58Adenylate and guanylate cyclase catalytic domain-c... [more]
G0R5N9_ICHMG2.490e-1037.21Guanylate cyclase domain-containing protein n=1 Ta... [more]
A0A5D6YAI8_9STRA1.180e-931.76Guanylate cyclase domain-containing protein n=1 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6319contigP-wetherbeei_contig6319:1007..1461 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog159749.K0TBI2
PFAMsGuanylate_cyc
Model size264
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons2
Evalue8.53e-17
EggNOG OGs28IMH@1|root,2QQYF@2759|Eukaryota,2XES5@2836|Bacillariophyta
DescriptionAdenylate and Guanylate cyclase catalytic domain
Cds size264
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186904.6450255-CDS-P-wetherbeei_contig6319:1006..10781683186904.6450255-CDS-P-wetherbeei_contig6319:1006..1078Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6319 1007..1078 +
1683186904.65787-CDS-P-wetherbeei_contig6319:1269..14611683186904.65787-CDS-P-wetherbeei_contig6319:1269..1461Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6319 1270..1461 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6319.2.1prot_P-wetherbeei_contig6319.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6319 1007..1461 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6319.2.1

>prot_P-wetherbeei_contig6319.2.1 ID=prot_P-wetherbeei_contig6319.2.1|Name=mRNA_P-wetherbeei_contig6319.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=88bp
WNKDRQLVALRAHCTAAFYATFKEGIDAYIAGEWPRARESLERADDIMVQ
RKGPEGDGPSKTILAYMRNREFQAPASWKGFRELTSK*
back to top

mRNA from alignment at P-wetherbeei_contig6319:1007..1461+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6319.2.1 ID=mRNA_P-wetherbeei_contig6319.2.1|Name=mRNA_P-wetherbeei_contig6319.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=455bp|location=Sequence derived from alignment at P-wetherbeei_contig6319:1007..1461+ (Phaeothamnion wetherbeei SAG_119_79)
TGGAACAAGGACCGGCAGCTCGTGGCGCTGCGAGCGCATTGCACCGCTGC GTTCTACGCCACCTTCAAGGAGGTTTGTCTTTCGAGCAGAGATGGCGGGA GAAGGAGGGTCAAGATGCAAGGCAAGCTGAGGGAGGGAGGAGGGCGGAAC ATAACAGCGGAATGCGAAAAGAGAACAGCTGTGTCTGCAGCAGAAGGAGC CAATTAATTCTTCTATTGACAAGAAAGGCCTCTCTTCCCCCAACCTATCC AAAAACGGCACAGGGCATCGATGCTTACATCGCTGGGGAGTGGCCGCGCG CGAGAGAGAGCTTGGAGCGCGCAGACGACATCATGGTGCAGCGCAAGGGG CCCGAAGGTGATGGTCCGAGCAAGACCATCCTGGCCTACATGCGCAATCG CGAATTCCAGGCGCCTGCGTCGTGGAAAGGTTTCCGAGAGCTCACGAGTA AATAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6319:1007..1461+

>mRNA_P-wetherbeei_contig6319.2.1 ID=mRNA_P-wetherbeei_contig6319.2.1|Name=mRNA_P-wetherbeei_contig6319.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=264bp|location=Sequence derived from alignment at P-wetherbeei_contig6319:1007..1461+ (Phaeothamnion wetherbeei SAG_119_79)
TGGAACAAGGACCGGCAGCTCGTGGCGCTGCGAGCGCATTGCACCGCTGC
GTTCTACGCCACCTTCAAGGAGGGCATCGATGCTTACATCGCTGGGGAGT
GGCCGCGCGCGAGAGAGAGCTTGGAGCGCGCAGACGACATCATGGTGCAG
CGCAAGGGGCCCGAAGGTGATGGTCCGAGCAAGACCATCCTGGCCTACAT
GCGCAATCGCGAATTCCAGGCGCCTGCGTCGTGGAAAGGTTTCCGAGAGC
TCACGAGTAAATAA
back to top