mRNA_P-wetherbeei_contig6301.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6301.2.1
Unique NamemRNA_P-wetherbeei_contig6301.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig6301.2.1 vs. uniprot
Match: A0A8J2S7U1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S7U1_9STRA)

HSP 1 Score: 252 bits (644), Expect = 2.000e-73
Identity = 147/233 (63.09%), Postives = 172/233 (73.82%), Query Frame = 1 
Query:  142 EEFQEMRFDMLMKGAMELQLPSNPLDVVIHELGGVNKVAELTGRKGRIVMTA-AGKSSYRLRTEDNGESAKRQNLHEKKLFQDGKKLVAIISEAASAGISLQADRRAKNQRRRVHITLELPWSADKAIQQLGRSHRANQVSAPEYKLLISQVGGERRFASAVAKRLQSLGALTQGDRRASHAGSDGLGFTAFDVDNKYGKQALNHLYRCMVHDTEVPLATPPTLSAEEADKVR 837
            +E +E+R   L+  A +L LP NPLD +I ELGG + VAE+TGRKGR+V  A +GK  Y  R   NG S + QN+HEK+ F  G+K VAIISEAASAGISLQADRR  NQRRRVHITLELPWSADKAIQQLGR+HR+NQ SAPEYK LIS VGGE+RFASAVA+RL+SLGALTQGDRRA+  G+ GLG TAF+ D K+GK AL  L   +   T  P   PP    E AD+ R
Sbjct:  696 DEVRELRRRFLV-AASKLGLPGNPLDTLIAELGGSDCVAEMTGRKGRMVRDATSGKVVYEARN-SNGVSLEMQNMHEKQAFNGGEKHVAIISEAASAGISLQADRRVANQRRRVHITLELPWSADKAIQQLGRTHRSNQSSAPEYKFLISSVGGEKRFASAVARRLESLGALTQGDRRAT-VGAKGLGLTAFNFDTKWGKNALATLGNIIQRVTSAPFTLPPL---EPADRER 922
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BLAST of mRNA_P-wetherbeei_contig6301.2.1 vs. uniprot
Match: A0A7S4A0M8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0M8_9STRA)

HSP 1 Score: 252 bits (644), Expect = 7.940e-73
Identity = 147/233 (63.09%), Postives = 172/233 (73.82%), Query Frame = 1 
Query:  142 EEFQEMRFDMLMKGAMELQLPSNPLDVVIHELGGVNKVAELTGRKGRIVMTA-AGKSSYRLRTEDNGESAKRQNLHEKKLFQDGKKLVAIISEAASAGISLQADRRAKNQRRRVHITLELPWSADKAIQQLGRSHRANQVSAPEYKLLISQVGGERRFASAVAKRLQSLGALTQGDRRASHAGSDGLGFTAFDVDNKYGKQALNHLYRCMVHDTEVPLATPPTLSAEEADKVR 837
            +E +E+R   L+  A +L LP NPLD +I ELGG + VAE+TGRKGR+V  A +GK  Y  R   NG S + QN+HEK+ F  G+K VAIISEAASAGISLQADRR  NQRRRVHITLELPWSADKAIQQLGR+HR+NQ SAPEYK LIS VGGE+RFASAVA+RL+SLGALTQGDRRA+  G+ GLG TAF+ D K+GK AL  L   +   T  P   PP    E AD+ R
Sbjct:  696 DEVRELRRRFLV-AASKLGLPGNPLDTLIAELGGSDCVAEMTGRKGRMVRDATSGKVVYEARN-SNGVSLEMQNMHEKQAFNGGEKHVAIISEAASAGISLQADRRVANQRRRVHITLELPWSADKAIQQLGRTHRSNQSSAPEYKFLISSVGGEKRFASAVARRLESLGALTQGDRRAT-VGAKGLGLTAFNFDTKWGKNALATLGNIIQRVTSAPFTLPPL---EPADRER 922
[Close]
BLAST of mRNA_P-wetherbeei_contig6301.2.1 vs. uniprot
Match: A0A1S3YUK0_TOBAC (protein strawberry notch-like isoform X4 n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S3YUK0_TOBAC)

HSP 1 Score: 243 bits (619), Expect = 3.490e-72
Identity = 134/217 (61.75%), Postives = 167/217 (76.96%), Query Frame = 1 
Query:  193 LQLPSNPLDVVIHELGGVNKVAELTGRKGRIVMTAAGKS-SYRLR-TEDNGESAKRQNLHEKKLFQDGKKLVAIISEAASAGISLQADRRAKNQRRRVHITLELPWSADKAIQQLGRSHRANQVSAPEYKLLISQVGGERRFASAVAKRLQSLGALTQGDRRASHAGSDGLGFTAFDVDNKYGKQALNHLYRCMVHDTEVPLATPPTLSAEEADKVR 837
            L LP+NPLD +I +LGG  KVAE+TGRKG +V  + GK  +Y+ R T+D   S +  N+HEK+LF DGKKLVAIISEA SAG+SLQADRRA NQRRRVH+TLELPWSAD+AIQQ GR+HR+NQ SAPEYKLL + +GGERRFAS VAKRL+SLGALTQGDRRA      GL  +A++ D+ +GK+AL  LYR ++    +PL  PP  SA++ D ++
Sbjct:  274 LDLPNNPLDDIIDQLGGPEKVAEITGRKGMLVRASGGKGVTYQARNTKD--VSMEMVNIHEKQLFMDGKKLVAIISEAGSAGVSLQADRRALNQRRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYKLLFTNLGGERRFASVVAKRLESLGALTQGDRRA------GLSLSAYNYDSSFGKRALMMLYRGIMEQDPLPLV-PPGCSADKPDALQ 481
[Close]
BLAST of mRNA_P-wetherbeei_contig6301.2.1 vs. uniprot
Match: D7FZ74_ECTSI (Helicase_C_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ74_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 4.410e-72
Identity = 129/237 (54.43%), Postives = 167/237 (70.46%), Query Frame = 1 
Query:  130 GMTQEEFQEMRFDMLMKGAMELQLPSNPLDVVIHELGGVNKVAELTGRKGRIVMTAAGKSSYRLRTEDNGESAKRQNLHEKKLFQDGKKLVAIISEAASAGISLQADR-RAKNQRRRVHITLELPWSADKAIQQLGRSHRANQVSAPEYKLLISQVGGERRFASAVAKRLQSLGALTQGDRRASHAGSDGLGFTAFDVDNKYGKQALNHLYRCMVHDTEVPLATPPTLSAEEADKVR 837
            G T+ +  + R    +     + LP  PLD ++ +LGG N VAE+TGR+ R+V    GK     R  +N      QN  E+  F +G+KLVAIIS+AASAG+SL A+R R +N RRR+HITLELPWSADKAIQQLGR+HRANQ   P Y+L++S+V GE RF++AVAKRL+SLGALTQGDRRASHAG+  LGFTAF+VDN+YGK +L+H+YR  +   E P+  PP L+ EE   +R
Sbjct:  281 GETKFDLAKSRLHAWLDRIHYMVLPHPPLDQLVDKLGGPNAVAEMTGRQDRMVKADDGKVYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAIISDAASAGVSLHANRTRPENPRRRLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQGDRRASHAGAGELGFTAFNVDNQYGKMSLDHIYRLCISSGEKPVVQPPDLADEECAHIR 517
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BLAST of mRNA_P-wetherbeei_contig6301.2.1 vs. uniprot
Match: A0A1S3YTW0_TOBAC (protein strawberry notch-like isoform X1 n=3 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S3YTW0_TOBAC)

HSP 1 Score: 243 bits (619), Expect = 6.250e-71
Identity = 134/217 (61.75%), Postives = 167/217 (76.96%), Query Frame = 1 
Query:  193 LQLPSNPLDVVIHELGGVNKVAELTGRKGRIVMTAAGKS-SYRLR-TEDNGESAKRQNLHEKKLFQDGKKLVAIISEAASAGISLQADRRAKNQRRRVHITLELPWSADKAIQQLGRSHRANQVSAPEYKLLISQVGGERRFASAVAKRLQSLGALTQGDRRASHAGSDGLGFTAFDVDNKYGKQALNHLYRCMVHDTEVPLATPPTLSAEEADKVR 837
            L LP+NPLD +I +LGG  KVAE+TGRKG +V  + GK  +Y+ R T+D   S +  N+HEK+LF DGKKLVAIISEA SAG+SLQADRRA NQRRRVH+TLELPWSAD+AIQQ GR+HR+NQ SAPEYKLL + +GGERRFAS VAKRL+SLGALTQGDRRA      GL  +A++ D+ +GK+AL  LYR ++    +PL  PP  SA++ D ++
Sbjct:  274 LDLPNNPLDDIIDQLGGPEKVAEITGRKGMLVRASGGKGVTYQARNTKD--VSMEMVNIHEKQLFMDGKKLVAIISEAGSAGVSLQADRRALNQRRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYKLLFTNLGGERRFASVVAKRLESLGALTQGDRRA------GLSLSAYNYDSSFGKRALMMLYRGIMEQDPLPLV-PPGCSADKPDALQ 481
[Close]
BLAST of mRNA_P-wetherbeei_contig6301.2.1 vs. uniprot
Match: D8LN05_ECTSI (PHD-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN05_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 7.550e-71
Identity = 133/234 (56.84%), Postives = 168/234 (71.79%), Query Frame = 1 
Query:  142 EEFQEMRFDM-------LMKGAMELQLPSNPLDVVIHELGGVNKVAELTGRKGRIVMTAAGKSSYRLRTEDNGESAKRQNLHEKKLFQDGKKLVAIISEAASAGISLQADRRAKNQRRRVHITLELPWSADKAIQQLGRSHRANQVSAPEYKLLISQVGGERRFASAVAKRLQSLGALTQGDRRASHAGSDGLGFTAFDVDNKYGKQALNHLYRCMVHDTEVPLATPPTLSAEE 822
            ++ ++ R+D+       L+  A  +QLP NPLD +++ELGG   VAE+TGRKGR+V    G+  Y  R   NG S   QN+ EK+ F  G+KLVAIISEAASAGISLQADRRAKNQ+ RVHIT+ELPWSADKA+QQLGRSHR+NQ SAP YKLL+S VGGERRFASAV+ RL+SLGALTQGDRR+  AG+ GLG +AF++D KYG+ AL  +    +   +  +  P     E+
Sbjct:   88 QDIKQQRYDVAVERQGRLLAAAKAMQLPGNPLDQLVNELGGAGVVAEMTGRKGRMVKKPDGEVVYEKRNA-NGISMTMQNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQGDRRS--AGAHGLGLSAFNMDTKYGRLALEKVLLAAIRRIQPEVVFPALPEGED 318
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BLAST of mRNA_P-wetherbeei_contig6301.2.1 vs. uniprot
Match: A0A7S3JZA5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZA5_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.260e-70
Identity = 143/225 (63.56%), Postives = 168/225 (74.67%), Query Frame = 1 
Query:  145 EFQEMRFDMLMKGAMELQLPSNPLDVVIHELGGVNKVAELTGRKGRIVMTA-AGKSSYRLRTEDNGESAKRQNLHEKKLFQDGKKLVAIISEAASAGISLQADRRAKNQRRRVHITLELPWSADKAIQQLGRSHRANQVSAPEYKLLISQVGGERRFASAVAKRLQSLGALTQGDRRASHAGSDGLGFTAFDVDNKYGKQALNHLYRCMVHDTEVPLATPPTLSA 816
            + +E+R   L   A  L LP NPLD +I  LGG   VAE+TGRK R+V     GK    +R E NG S + QN+HEK+ FQ+G+K VAIISEAASAGISLQADRR  NQ+RRVHITLELPWSADKAIQQLGRSHR+NQ SAPEYK LIS VGGERRFASAVA+RL+SLGALTQGDRRA+  G+ GLG TAF+ D K+G+QAL+  Y  +++    P   P TLSA
Sbjct:  794 DLREIRRRFLAASAA-LGLPGNPLDTLIDALGGSENVAEMTGRKNRMVRDPKTGKVRQEVRNEKNGVSLEMQNMHEKRCFQNGEKCVAIISEAASAGISLQADRRVPNQKRRVHITLELPWSADKAIQQLGRSHRSNQSSAPEYKFLISSVGGERRFASAVARRLESLGALTQGDRRAT-VGAKGLGLTAFNFDTKWGRQALSK-YFGIINKVNNP---PYTLSA 1012
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BLAST of mRNA_P-wetherbeei_contig6301.2.1 vs. uniprot
Match: A0A5B6UFI2_9ROSI (Protein strawberry notch-like n=1 Tax=Gossypium australe TaxID=47621 RepID=A0A5B6UFI2_9ROSI)

HSP 1 Score: 234 bits (597), Expect = 9.350e-70
Identity = 126/216 (58.33%), Postives = 165/216 (76.39%), Query Frame = 1 
Query:  193 LQLPSNPLDVVIHELGGVNKVAELTGRKGRIVMTAAGKS-SYRLRTEDNGESAKRQNLHEKKLFQDGKKLVAIISEAASAGISLQADRRAKNQRRRVHITLELPWSADKAIQQLGRSHRANQVSAPEYKLLISQVGGERRFASAVAKRLQSLGALTQGDRRASHAGSDGLGFTAFDVDNKYGKQALNHLYRCMVHDTEVPLATPPTLSAEEADKVR 837
            L LP+NPLD +I +LGG +KVAE+TGR+G +V  ++GK  +Y+ R      + +  N+HEK+LF DGKKLVAIISEA SAG+SLQADRRA NQ+RRVH+TLELPWSAD+AIQQ GR+HR+NQ SAPEY+LL + +GGERRFAS VAKRL+SLGALTQGDRRA      G   +A++ D+ YGK+AL  +YR ++    +P+  PP  S+E+ + V+
Sbjct:  286 LDLPNNPLDDIIDQLGGPDKVAEMTGRRGMLVRASSGKGVTYQARNTKEV-TMEMVNMHEKQLFMDGKKLVAIISEAGSAGVSLQADRRALNQKRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYRLLFTNLGGERRFASIVAKRLESLGALTQGDRRA------GPSLSAYNYDSSYGKKALMVMYRGIMEQDNLPVV-PPGCSSEKPETVQ 493
[Close]
BLAST of mRNA_P-wetherbeei_contig6301.2.1 vs. uniprot
Match: A0A0V0IZG3_SOLCH (PHD-type domain-containing protein n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0IZG3_SOLCH)

HSP 1 Score: 238 bits (608), Expect = 2.420e-69
Identity = 134/217 (61.75%), Postives = 164/217 (75.58%), Query Frame = 1 
Query:  193 LQLPSNPLDVVIHELGGVNKVAELTGRKGRIVMTAAGKS-SYRLR-TEDNGESAKRQNLHEKKLFQDGKKLVAIISEAASAGISLQADRRAKNQRRRVHITLELPWSADKAIQQLGRSHRANQVSAPEYKLLISQVGGERRFASAVAKRLQSLGALTQGDRRASHAGSDGLGFTAFDVDNKYGKQALNHLYRCMVHDTEVPLATPPTLSAEEADKVR 837
            L LP+NPLD +I +LGG  KVAE+TGRKG +V  A GK  +Y+ R T+D   S +  N+HEK+LF +GKKLVAIISEA SAG+SLQADRRA NQRRRVH+TLELPWSAD+AIQQ GR+HR+NQ SAPEYKLL + +GGERRFAS VAKRL+SLGALTQGDRRA      G   +A++ D+ YGK+AL  LYR ++     PL  PP  SA+  D ++
Sbjct:  313 LDLPNNPLDDIIDQLGGPEKVAEITGRKGMLVRAANGKGVTYQARNTKD--VSMEMVNIHEKQLFMEGKKLVAIISEAGSAGVSLQADRRALNQRRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYKLLFTNLGGERRFASVVAKRLESLGALTQGDRRA------GPSLSAYNYDSSYGKRALVMLYRGIMEQDPFPLV-PPGCSADIPDAIQ 520
[Close]
BLAST of mRNA_P-wetherbeei_contig6301.2.1 vs. uniprot
Match: A0A1S4C681_TOBAC (protein strawberry notch n=6 Tax=Nicotiana TaxID=4085 RepID=A0A1S4C681_TOBAC)

HSP 1 Score: 241 bits (614), Expect = 2.430e-69
Identity = 133/217 (61.29%), Postives = 166/217 (76.50%), Query Frame = 1 
Query:  193 LQLPSNPLDVVIHELGGVNKVAELTGRKGRIVMTAAGKS-SYRLR-TEDNGESAKRQNLHEKKLFQDGKKLVAIISEAASAGISLQADRRAKNQRRRVHITLELPWSADKAIQQLGRSHRANQVSAPEYKLLISQVGGERRFASAVAKRLQSLGALTQGDRRASHAGSDGLGFTAFDVDNKYGKQALNHLYRCMVHDTEVPLATPPTLSAEEADKVR 837
            L LP+NPLD +I +LGG  KVAE+TGRKG +V  + GK  +Y+ R T+D   S +  N+HEK+LF DGKKLVAIISEA SAG+SLQADRRA NQRRRVH+TLELPWSAD+AIQQ GR+HR+NQ SAPEYKLL + +GGERRFAS VAKRL+SLGALTQGDRRA      G   +A++ D+ +GK+AL  LYR ++    +PL  PP  SA++ D ++
Sbjct:  500 LDLPNNPLDDIIDQLGGPEKVAEITGRKGMLVRASGGKGVTYQARNTKD--VSMEMVNIHEKQLFMDGKKLVAIISEAGSAGVSLQADRRALNQRRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYKLLFTNLGGERRFASVVAKRLESLGALTQGDRRA------GPSLSAYNYDSSFGKRALMMLYRGIMEQDPLPLV-PPGCSADKPDAIQ 707
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6301.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J2S7U1_9STRA2.000e-7363.09Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4A0M8_9STRA7.940e-7363.09Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1S3YUK0_TOBAC3.490e-7261.75protein strawberry notch-like isoform X4 n=1 Tax=N... [more]
D7FZ74_ECTSI4.410e-7254.43Helicase_C_4 domain-containing protein n=1 Tax=Ect... [more]
A0A1S3YTW0_TOBAC6.250e-7161.75protein strawberry notch-like isoform X1 n=3 Tax=N... [more]
D8LN05_ECTSI7.550e-7156.84PHD-type domain-containing protein (Fragment) n=1 ... [more]
A0A7S3JZA5_9STRA1.260e-7063.56Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A5B6UFI2_9ROSI9.350e-7058.33Protein strawberry notch-like n=1 Tax=Gossypium au... [more]
A0A0V0IZG3_SOLCH2.420e-6961.75PHD-type domain-containing protein n=1 Tax=Solanum... [more]
A0A1S4C681_TOBAC2.430e-6961.29protein strawberry notch n=6 Tax=Nicotiana TaxID=4... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6301contigP-wetherbeei_contig6301:1121..3093 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog4098.XP_009595783.1
PFAMsAAA_34,Helicase_C_4,PHD
Model size837
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
GOsGO:0002009,GO:0002165,GO:0003002,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006355,GO:0006357,GO:0006950,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007275,GO:0007389,GO:0007444,GO:0007447,GO:0007450,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008150,GO:0008587,GO:0009266,GO:0009408,GO:0009628,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009953,GO:0009987,GO:0010286,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016584,GO:0019219,GO:0019222,GO:0022607,GO:0023052,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031490,GO:0031497,GO:0032501,GO:0032502,GO:0034622,GO:0034728,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035222,GO:0035239,GO:0035295,GO:0040029,GO:0042393,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0048190,GO:0048513,GO:0048518,GO:0048522,GO:0048563,GO:0048569,GO:0048583,GO:0048584,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0051716,GO:0060255,GO:0060429,GO:0060562,GO:0065003,GO:0065004,GO:0065007,GO:0071103,GO:0071824,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0097159,GO:1900034,GO:1900036,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990841,GO:2000112,GO:2001141
Exons5
Evalue2.84e-70
EggNOG OGsKOG1513@1|root,KOG1513@2759|Eukaryota,37NG7@33090|Viridiplantae,3GCMS@35493|Streptophyta,44IEN@71274|asterids
DescriptionProtein strawberry notch
Cds size837
COG categoryKT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186903.4256637-CDS-P-wetherbeei_contig6301:1120..12721683186903.4256637-CDS-P-wetherbeei_contig6301:1120..1272Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6301 1121..1272 -
1683186903.4403644-CDS-P-wetherbeei_contig6301:1544..17131683186903.4403644-CDS-P-wetherbeei_contig6301:1544..1713Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6301 1545..1713 -
1683186903.4503224-CDS-P-wetherbeei_contig6301:1936..22001683186903.4503224-CDS-P-wetherbeei_contig6301:1936..2200Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6301 1937..2200 -
1683186903.4623773-CDS-P-wetherbeei_contig6301:2614..26861683186903.4623773-CDS-P-wetherbeei_contig6301:2614..2686Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6301 2615..2686 -
1683186903.4797819-CDS-P-wetherbeei_contig6301:2913..30931683186903.4797819-CDS-P-wetherbeei_contig6301:2913..3093Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6301 2914..3093 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6301.2.1prot_P-wetherbeei_contig6301.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6301 1121..3093 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6301.2.1

>prot_P-wetherbeei_contig6301.2.1 ID=prot_P-wetherbeei_contig6301.2.1|Name=mRNA_P-wetherbeei_contig6301.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=279bp
MWGDGGSGGSSGGGGGSGSSGGGGGTARSGVDECDDVLNMAPGGMTQEEF
QEMRFDMLMKGAMELQLPSNPLDVVIHELGGVNKVAELTGRKGRIVMTAA
GKSSYRLRTEDNGESAKRQNLHEKKLFQDGKKLVAIISEAASAGISLQAD
RRAKNQRRRVHITLELPWSADKAIQQLGRSHRANQVSAPEYKLLISQVGG
ERRFASAVAKRLQSLGALTQGDRRASHAGSDGLGFTAFDVDNKYGKQALN
HLYRCMVHDTEVPLATPPTLSAEEADKVR
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mRNA from alignment at P-wetherbeei_contig6301:1121..3093-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6301.2.1 ID=mRNA_P-wetherbeei_contig6301.2.1|Name=mRNA_P-wetherbeei_contig6301.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1973bp|location=Sequence derived from alignment at P-wetherbeei_contig6301:1121..3093- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGGGAGACGGCGGCAGCGGCGGCAGCAGCGGGGGCGGCGGCGGCAG
TGGTAGCAGCGGGGGCGGCGGCGGCACGGCGCGCAGCGGCGTGGATGAGT
GCGACGACGTGCTGAACATGGCGCCCGGCGGCATGACGCAGGAGGAGTTC
CAGGAGATGCGCTTCGACATGCTCATGAAGGTTCGTCTGAGGCTGGGATC
TTTAAAAAGCTTGTTTCCCTTTTGCGATTTTCTTGCTAGCACAAGGTGTT
GCTGCTTGGAAGGTTTTGCCGCCCCTTCCTGCATTTTTTTGCCGCCCCTT
CCTGCATTTTTCCTACCACGCTTCCTTCGCACAGAAGTCATTCGGTATAC
CATTCTGACATCTAGTTCGTCACCGCCGCGCTGTGTCTTCTGATTTCACC
CTTTCAGGGGGCCATGGAGCTGCAGCTGCCGTCAAACCCGCTGGATGTCG
TCATCCACGAGCTCGGCGGCGTCAACAAAGTGCGCGATGTTTGGCTTAAT
TTTTAGAAGGAAATTTTAAGAGGGTCCATTATTAGGATGTCTCTGTCCGG
GTTCTCCATGTTGATTGTTCAGGAATGCCTCTGGCGCGGAGTAGATCAAG
GGCAGAATAGTATTTATGGGTCGAAAACTATTTTAAATACTCTGCCGCTG
CTCACATTCTTCTTCCGTACGGGCCTTCTATCGCTTCGTGCTGCCGCCCC
CGCCCTTGCCGCCGCCGCCACCACGGCCGCTGCCGCCACTGTTGCCGCCG
TCGCTGCTGCCATCTCTGCTGCTGCCGCCGCCACGTTCCTCTGTGCCACT
GCCGCCGTCGCCCCTGCCGCCATCGCACCTTCGGTTGCCGCTGCCTTCCC
TCCAATATATCGACCCTGCTCTCTTTTGGCCGCTGCGGCGCAGGTGGCGG
AGCTGACTGGGCGCAAGGGCCGCATCGTAATGACCGCGGCGGGCAAGTCA
TCGTACCGGCTGCGCACCGAGGACAACGGCGAGAGCGCTAAACGGCAGAA
CTTGCATGAGAAGAAGCTGTTCCAGGATGGCAAAAAGCTGGTGGCCATCA
TCAGCGAGGCAGCGAGCGCGGGCATCTCGCTGCAGGCGGACCGGCGCGCG
AAGAACCAGCGGCGGCGCGTTCACATCACGCTGGAGCTGCCGTGGTCCGC
CGACAAGGTCAGTCATTTTGTCACTCCGTCGGTCCATCAGGTCACTCCGT
CGGTCCATCAGTTCTTTAGCCGATTGGTTTTCTATCCTTCCTTTCCGTTG
TGCCTCTTTTGTCTTCCAGATATCTATCATCTGAGTGCGTTCCGAAGCTT
GGTACCAAACCGGTTCTGACTGGTCTCCTCTTGGCTGCTACCTACCATTT
GCGGTCTCCTGCAACACAACAAACAAACAGGCGATCCAGCAGTTGGGTCG
CTCGCACCGCGCCAACCAGGTGTCGGCTCCCGAGTACAAACTGCTCATCT
CGCAGGTCGGCGGCGAGCGCCGCTTCGCCTCCGCCGTCGCCAAGCGCCTC
CAATCGCTCGGCGCCCTCACGCAGGGCGACCGCCGGGCGTCGCACGCAGG
TACAAACGGTCGCTGCGGCTGCGATGCGCCGACACGCAAACCCTGACCCT
AAACCTTGACCCTAACCCTTAGCCGCTGATGTGTGGATTTCGTTTCTTTG
TGTCGCATTGTGGCCGCAAAGCCCCGGGTCAATTGGATTGGGACTGTTTT
TTTTGAGCCGACGTTCCTTCGTTTGTTCCGGATGTTTTGGAGTGCTAGTT
TTCTCTGGTCCGGCACTGATCGCGTTGCTCGCGCCCGCCGACGCCGTCCC
ACTATCACAACCCCAAACCAGGCTCGGACGGGCTGGGCTTCACGGCCTTC
GACGTCGACAACAAGTACGGCAAGCAGGCGCTCAACCACCTCTACCGCTG
CATGGTGCACGACACGGAGGTACCGCTGGCGACGCCGCCAACGCTGTCAG
CGGAAGAGGCCGACAAGGTCCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6301:1121..3093-

>mRNA_P-wetherbeei_contig6301.2.1 ID=mRNA_P-wetherbeei_contig6301.2.1|Name=mRNA_P-wetherbeei_contig6301.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=837bp|location=Sequence derived from alignment at P-wetherbeei_contig6301:1121..3093- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGGGAGACGGCGGCAGCGGCGGCAGCAGCGGGGGCGGCGGCGGCAG
TGGTAGCAGCGGGGGCGGCGGCGGCACGGCGCGCAGCGGCGTGGATGAGT
GCGACGACGTGCTGAACATGGCGCCCGGCGGCATGACGCAGGAGGAGTTC
CAGGAGATGCGCTTCGACATGCTCATGAAGGGGGCCATGGAGCTGCAGCT
GCCGTCAAACCCGCTGGATGTCGTCATCCACGAGCTCGGCGGCGTCAACA
AAGTGGCGGAGCTGACTGGGCGCAAGGGCCGCATCGTAATGACCGCGGCG
GGCAAGTCATCGTACCGGCTGCGCACCGAGGACAACGGCGAGAGCGCTAA
ACGGCAGAACTTGCATGAGAAGAAGCTGTTCCAGGATGGCAAAAAGCTGG
TGGCCATCATCAGCGAGGCAGCGAGCGCGGGCATCTCGCTGCAGGCGGAC
CGGCGCGCGAAGAACCAGCGGCGGCGCGTTCACATCACGCTGGAGCTGCC
GTGGTCCGCCGACAAGGCGATCCAGCAGTTGGGTCGCTCGCACCGCGCCA
ACCAGGTGTCGGCTCCCGAGTACAAACTGCTCATCTCGCAGGTCGGCGGC
GAGCGCCGCTTCGCCTCCGCCGTCGCCAAGCGCCTCCAATCGCTCGGCGC
CCTCACGCAGGGCGACCGCCGGGCGTCGCACGCAGGCTCGGACGGGCTGG
GCTTCACGGCCTTCGACGTCGACAACAAGTACGGCAAGCAGGCGCTCAAC
CACCTCTACCGCTGCATGGTGCACGACACGGAGGTACCGCTGGCGACGCC
GCCAACGCTGTCAGCGGAAGAGGCCGACAAGGTCCGC
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