mRNA_P-wetherbeei_contig6299.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6299.1.2
Unique NamemRNA_P-wetherbeei_contig6299.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6299.1.2 vs. uniprot
Match: A0A024US28_9STRA (SH2 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024US28_9STRA)

HSP 1 Score: 184 bits (468), Expect = 8.380e-46
Identity = 117/320 (36.56%), Postives = 176/320 (55.00%), Query Frame = 2
Query:  155 HLFSAPLT--QPQASLGSXXXXXXXXXXXAEARGVDQLDHAAERDSLLHTLREANKRVAFFSEHAEVGTFRRVVGGLPRQPRLLHFTGHGVYGSLALEDGQGRLVFASRSAILEMASGGGAAQ----LVLVFLSSCFSESVADAFVSAGVPHVVAVSRSTQIPDKKAQEFAHSFYAALLRGDTVRQAFALARDRLDVAGGGDGYSGYGAKFRLLPEDGDHLERPLAGLPDGAHENVSRPVAPSSCDGVAEHFLGRAAAVQRLFALMVGGRRRVAVVGERGIGKTQICLAACEYERARGVFGETFFCRLDAAAGGDARYFL 1096
            HL S+PL   Q  +SLG+            + + ++ LD   ER  LL  L+E  K++ + SE A+V TFR+VV       R LHF+GHGV G +  E       F S+  +  +   G  ++    + LVF+S+C SESVA+AFVSAGVPHVV V +  ++ D+KA EF+ +FY ALL G +V ++F + + + D+    D +    ++F+LL           + LP G +E+++ P+  + CD VAE F+GR+  V  +F  +  G R V +VG+ G+GKT+I L AC+Y   R +F   FF R   +A     Y L
Sbjct:    4 HLHSSPLVVRQSSSSLGNSVNANCQYGSNNDFQPIEILDVKEERRLLLQCLQECGKQIQWRSEVADVHTFRKVVS---HGCRALHFSGHGVPGKVIFESATCEAHFLSQDELKTLLLAGDQSRPENAMRLVFVSACHSESVAEAFVSAGVPHVVVVPKEDKVLDQKAMEFSKAFYTALLAGHSVSKSFEIGQVQADIVTVSDTHQ---SRFKLLGTGNHATSHLFSDLPPGMYEDLTPPLPINECDAVAEAFIGRSLEVHAVFTALAEGARMVCLVGDAGMGKTEIALQACQYATERHLFERIFFLRWTTSATSLTSYVL 317          
BLAST of mRNA_P-wetherbeei_contig6299.1.2 vs. uniprot
Match: T0RP06_SAPDV (SH2 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RP06_SAPDV)

HSP 1 Score: 178 bits (452), Expect = 9.620e-44
Identity = 120/312 (38.46%), Postives = 175/312 (56.09%), Query Frame = 2
Query:  155 HLFSAPLTQPQ-ASLGSXXXXXXXXXXXAEARGVDQLDHAAERDSLLHTLREANKRVAFFSEHAEVGTFRRVVGGLPRQPRLLHFTGHGVYGSLALEDGQGRLVFASRSAILEMASGG--GAAQ---LVLVFLSSCFSESVADAFVSAGVPHVVAVSRSTQIPDKKAQEFAHSFYAALLRGDTVRQAFALARDRLDVAGGGDGYSGYGAKFRLLPEDGDHLERPL-AGLPDGAHENVSRPVAPSSCDGVAEHFLGRAAAVQRLFALMVGGRRRVAVVGERGIGKTQICLAACEYERARGVFGETFFCRLDAA 1069
            HL S+PL   Q ASL              + + ++ LD   ER  LL  L+E NK+V + SE A+V TFR+V+       R LHF+GHGV G +  E+G     F S+  +  +   G  G +    + LVF+S+C SESVA+AFVSAGVPHVV V +  ++ D+KA EF+ +FY ALL G +V +AF + + + D+    D +    +KF+LL  +GDH    L + L  G +++++ P+  + CD VAE F+GR+  V   +  +V G R V + G  GIGKT++ L  C+Y   R +F   FF R   A
Sbjct:    4 HLHSSPLVVRQTASLPKPLNPAHPFSFSLDLQPIEILDVKEERRLLLQCLQECNKQVCWRSEVADVHTFRKVIS---YGCRALHFSGHGVPGKVIFENGTCEAHFLSQQELKTLLLAGVQGTSPENTMRLVFVSACHSESVAEAFVSAGVPHVVVVPKEDKVLDQKAMEFSKAFYTALLAGHSVYKAFEIGQVQADIVSIADHHQ---SKFKLLG-NGDHARSHLFSDLALGKYQDLTPPLPINECDAVAEVFVGRSIEVHACYTALVEGARMVCLTGPAGIGKTEVALQTCQYATDRYLFARIFFLRFALA 308          
BLAST of mRNA_P-wetherbeei_contig6299.1.2 vs. uniprot
Match: A0A1V9Z989_9STRA (SH2 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z989_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.230e-43
Identity = 117/311 (37.62%), Postives = 175/311 (56.27%), Query Frame = 2
Query:  155 HLFSAPLTQPQA-SLGSXXXXXXXXXXXAEARGVDQLDHAAERDSLLHTLREANKRVAFFSEHAEVGTFRRVVGGLPRQPRLLHFTGHGVYGSLALEDGQGRLVFAS----RSAILEMASGGGAAQLVLVFLSSCFSESVADAFVSAGVPHVVAVSRSTQIPDKKAQEFAHSFYAALLRGDTVRQAFALARDRLDVAGGGDGYSGYGAKFRLLPEDGDHLERPL-AGLPDGAHENVSRPVAPSSCDGVAEHFLGRAAAVQRLFALMVGGRRRVAVVGERGIGKTQICLAACEYERARGVFGETFFCRLDAA 1069
            HL S+PL   Q  SL              + + ++ LD   ER  LL  L+E  K+V + SE A+V TFR+V+       R LHF+GHGV G +  E+G     F S    ++ +L    G     + LVF+S+C SESVA+AFVSAGVPHVV V +  ++ D+KA EF+ +FY ALL G +V ++F + + + D+    D +    +KF+LL  +GDH    L + +P G +++++ P+  + CD VAE F+GR+  V  ++  +V G R V + G  GIGKT++ L +C+Y   R +F   FF R   A
Sbjct:    4 HLHSSPLVARQTTSLPKPLNSSHPFSFSLDLQPIEILDVKEERRLLLQCLQECGKQVRWRSEVADVHTFRKVIS---YGCRALHFSGHGVPGKVIFENGNCEAHFLSQKELKTLLLAGVQGSPENTMRLVFVSACHSESVAEAFVSAGVPHVVVVPKEDKVLDQKAMEFSKAFYTALLAGHSVYKSFEIGQVQADIVSIADHHR---SKFKLLG-NGDHAASHLFSDIPLGRYQDLTPPLPLNECDAVAEVFVGRSIEVHAVYTALVEGARMVCLTGPPGIGKTEVALQSCQYATDRYLFERIFFLRFTPA 307          
BLAST of mRNA_P-wetherbeei_contig6299.1.2 vs. uniprot
Match: W4HDL0_9STRA (SH2 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HDL0_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.620e-43
Identity = 112/310 (36.13%), Postives = 172/310 (55.48%), Query Frame = 2
Query:  155 HLFSAPLTQPQAS--LGSXXXXXXXXXXXAEARGVDQLDHAAERDSLLHTLREANKRVAFFSEHAEVGTFRRVVGGLPRQPRLLHFTGHGVYGSLALEDGQGRLVFASRSAILEMASGGGA----AQLVLVFLSSCFSESVADAFVSAGVPHVVAVSRSTQIPDKKAQEFAHSFYAALLRGDTVRQAFALARDRLDVAGGGDGYSGYGAKFRLLPEDGDHLERPLAGLPDGAHENVSRPVAPSSCDGVAEHFLGRAAAVQRLFALMVGGRRRVAVVGERGIGKTQICLAACEYERARGVFGETFFCRLDA 1066
            HL S+PL   Q+   L +           ++ + ++ LD   ER  LL  L+E  K+V + SE A+V TFR+V+       R LHF+GHGV G +  E       F S+  +  +   G      + + LVF+S+C SESVA+AFVSAGVPHVV V +  ++ D+KA EF+ +FY ALL G +V ++F + + + ++         + +KF+LL           + LP G +E+++ P+  + CD VAE F+GR+  V  +F  +  G R V++VG+ G+GKT++ L AC+Y   R +F   FF RL A
Sbjct:    4 HLHSSPLVVRQSCSPLSNPINATRPFGLSSDFQPIEILDVKEERRLLLQCLQECGKQVKWRSEVADVHTFRKVIS---HGCRALHFSGHGVPGKVIFESATCEAHFLSQQELKTLLLAGDQPCPESAMRLVFVSACHSESVAEAFVSAGVPHVVVVPKEDKVLDQKAMEFSKAFYTALLAGHSVLKSFEIGQVQANIV-----TDTHQSKFKLLGCGNHAASHLFSDLPPGPYEDLTPPLPVNECDAVAEAFIGRSLEVHAVFTALAEGARMVSLVGDAGMGKTEVALQACQYATDRHLFERVFFLRLSA 305          
BLAST of mRNA_P-wetherbeei_contig6299.1.2 vs. uniprot
Match: A0A6G0XFL8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFL8_9STRA)

HSP 1 Score: 176 bits (446), Expect = 6.150e-43
Identity = 113/309 (36.57%), Postives = 172/309 (55.66%), Query Frame = 2
Query:  155 HLFSAPLT--QPQASLGSXXXXXXXXXXXAEARGVDQLDHAAERDSLLHTLREANKRVAFFSEHAEVGTFRRVVGGLPRQPRLLHFTGHGVYGSLALEDGQGRLVFASRSAILEMASGGGAAQ----LVLVFLSSCFSESVADAFVSAGVPHVVAVSRSTQIPDKKAQEFAHSFYAALLRGDTVRQAFALARDRLDVAGGGDGYSGYGAKFRLLPEDGDHLERPL-AGLPDGAHENVSRPVAPSSCDGVAEHFLGRAAAVQRLFALMVGGRRRVAVVGERGIGKTQICLAACEYERARGVFGETFFCRL 1060
            HL S+PL   Q  +S               + + ++ LD   ER  LL  L+E  K+V + SE A+V TFR+VV       R LHF+GHGV G +  E       F S+  +  +   G        + LVF+S+C SESVA+AFVSAGVPHVV V +  ++ D+KA EF+ +FY ALL G +V ++F + + + D+    D +    +KF+LL  +GDH    L + +P G +++++ P+  + CD VAE F+GR+  V  ++  +  G R + + GE G+GKT+I L +C+Y   R +F   FF R+
Sbjct:    4 HLHSSPLVVRQTASSASKGLNAPRAFGISTDVQPIEILDVKEERRLLLQCLQECGKQVKWRSEVADVHTFRKVVS---HGCRALHFSGHGVPGKVIFESATCEAHFLSQQELKTLLLAGDQTSPENAMRLVFVSACHSESVAEAFVSAGVPHVVVVPKEDKVLDQKAMEFSKAFYTALLAGHSVLKSFEIGQVQADIVTVADAHH---SKFKLLG-NGDHATSFLFSDVPLGRYDDLTPPLPTNECDAVAEVFIGRSLEVHAVYTALAEGARMICITGEPGMGKTEIALQSCQYATDRYLFQHIFFLRI 305          
BLAST of mRNA_P-wetherbeei_contig6299.1.2 vs. uniprot
Match: D8LEZ2_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ2_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 1.330e-42
Identity = 113/248 (45.56%), Postives = 141/248 (56.85%), Query Frame = 2
Query:  416 GVYGSLALEDGQGRLVFASRSAILEMASGGGAAQ------LVLVFLSSCFSESVADAFVSAGVPHVVAVSRSTQIPDKKAQEFAHSFYAALLRGDTVRQAFALARDRLDVAGGGDGYSGYGAKFRLLPEDGDHLERPLAGLPDGAHENVSRPVAPSSCDGVAEHFLGRAAAVQRLFALMVGGRRRVAVVGERGIGKTQICLAACEYERARGVFGETFFCRLDAAAGG-DARYFLRAGLGMTEPLPSGA 1138
            G  G L  E G G   F   S  +E  +  G A+      L LVFLSSC S+SVA  F+ AGV HV+AV + +++ D KA EFA SFYA+LLRGDTVR+AF L    L+    G      G KF LLP +GDH       +PDG   + +    P  CD V ++F GRA  VQ++   MV G   V + G++GIGKTQ+ L AC Y R R VFGE FFCRLD A GG DA  +L  G      LP+G+
Sbjct:   41 GYAGGLGFEGGIGYAPFVDVSESVEPEARLGGAEGAPRTGLQLVFLSSCHSQSVAKCFIEAGVRHVIAVKKDSKVLDHKAAEFAKSFYASLLRGDTVRRAFLLGSACLE----GSDQPEEGHKFLLLPPEGDHDIPVFEEVPDGQFVDATPLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAVGGNDACNWLEQGF----QLPAGS 280          
BLAST of mRNA_P-wetherbeei_contig6299.1.2 vs. uniprot
Match: A0A1W0AAB8_9STRA (SH2 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAB8_9STRA)

HSP 1 Score: 174 bits (442), Expect = 2.130e-42
Identity = 116/310 (37.42%), Postives = 171/310 (55.16%), Query Frame = 2
Query:  155 HLFSAPLTQPQA-SLGSXXXXXXXXXXXAEARGVDQLDHAAERDSLLHTLREANKRVAFFSEHAEVGTFRRVVGGLPRQPRLLHFTGHGVYGSLALEDGQGRLVFAS----RSAILEMASGGGAAQLVLVFLSSCFSESVADAFVSAGVPHVVAVSRSTQIPDKKAQEFAHSFYAALLRGDTVRQAFALARDRLDVAGGGDGYSGYGAKFRLLPEDGDHLERPL-AGLPDGAHENVSRPVAPSSCDGVAEHFLGRAAAVQRLFALMVGGRRRVAVVGERGIGKTQICLAACEYERARGVFGETFFCRLDA 1066
            HL S+PL   Q  S+             ++ + ++ LD   ER  LL  L+E  K+V + SE A+V TFR+ V       R LHF+GHGV G +  E+G     F S    ++ +L    G     + LVF+S+C SESVA+AFVSAGVPHVV V +  ++ D+KA EF+ +FY ALL G +V +AF + + + D+    D +    +KF+LL  +GDH    L + +  G + +++  +  + CD VAE F+GR+  V  ++  +V G R V + G  GIGKT+I L  C+Y   R +F   FF R  A
Sbjct:    4 HLHSSPLVARQTTSVSKPLSTSCPFSFSSDLQPIEILDVKEERRLLLQCLQECGKQVCWRSEVADVHTFRKAVS---YGCRALHFSGHGVPGKVIFENGSCEAHFLSQQELKTLLLAGVQGSPENTMRLVFVSACHSESVAEAFVSAGVPHVVVVPKEDKVLDQKAMEFSKAFYTALLAGHSVYKAFEIGQVQADIVSIADHHQ---SKFKLLG-NGDHARSHLFSDIQPGKYHDLTPVLPVNECDAVAEVFVGRSIEVHAVYTALVEGARMVCLTGPAGIGKTEIALQCCQYATDRYLFQRIFFLRFTA 306          
BLAST of mRNA_P-wetherbeei_contig6299.1.2 vs. uniprot
Match: A0A5D6XJL3_9STRA (SH2 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJL3_9STRA)

HSP 1 Score: 174 bits (442), Expect = 2.970e-42
Identity = 124/362 (34.25%), Postives = 176/362 (48.62%), Query Frame = 2
Query:  137 MHFLVCHLFSAPLTQPQA------SLGSXXXXXXXXXXXAEARGVDQLDHAAERDSLLHTLREANKRVAFFSEHAEVGTFRRVVGGLPRQPRLLHFTGHGVYGSLALEDGQGRLVFASRSAILEMASGGGAAQLV----------------------------------------------LVFLSSCFSESVADAFVSAGVPHVVAVSRSTQIPDKKAQEFAHSFYAALLRGDTVRQAFALARDRLDVAG-GGDGYSGYGAKFRLLPEDGDHLERPLAGLPDGAHENVSRPVAPSSCDGVAEHFLGRAAAVQRLFALMVGGRRRVAVVGERGIGKTQICLAACEYERARGVFGETFFCRLD 1063
            M  +  HL S+PL   +       SL +            EA  V+ +D   ER  L+  +RE+ +R+A+ SE A++ TFR+V   L    R LHF+GHGV G +  ED +G   F S+  + ++   GG A                                                 LVF+S+C SESVA+AFVS GVPHVV VS+  ++ D+KA EFA++FY AL  G  V  AFA+   + D+A    D  +G  + F+LL   GDH  R    +P GA    S P+  + CD VAE F+GR+  V   +  +V G R V++ GERG+GKT++ L   +Y   R +F   FF R +
Sbjct:    1 MAAIFAHLHSSPLVVRRRQGSEWRSLSASSATSGTTSAGLEA--VELIDVKEERKLLVRCVRESQRRIAWHSEVADLHTFRKV---LSFGCRALHFSGHGVPGKVIFEDKKGEAQFISQHELRDLLLAGGTASTASNDXXXXXXXXXXXSGDGVRAHEVERGWIALDHASPARPPPPVPVQLVFVSACHSESVAEAFVSVGVPHVVVVSKDDKVLDRKAMEFANAFYTALFAGHAVATAFAIGHVQADIATVPADAAAGRASSFKLLGA-GDHSARLFRDVPAGAFVERSLPLPGNDCDAVAEVFVGRSLEVHSAYKSLVEGARLVSITGERGVGKTEVALQCAQYATERHLFKRIFFARFE 356          
BLAST of mRNA_P-wetherbeei_contig6299.1.2 vs. uniprot
Match: K3XA55_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XA55_GLOUD)

HSP 1 Score: 166 bits (420), Expect = 1.740e-39
Identity = 113/326 (34.66%), Postives = 165/326 (50.61%), Query Frame = 2
Query:  251 VDQLDHAAERDSLLHTLREANKRVAFFSEHAEVGTFRRVVGGLPRQPRLLHFTGHGVYGSLALEDGQGRLVFASRSAILEMASGGGAAQ-------------------------------------------------------LVLVFLSSCFSESVADAFVSAGVPHVVAVSRSTQIPDKKAQEFAHSFYAALLRGDTVRQAFALARDRLDVAGGGDGYSGYGAKFRLLPEDGDHLERPLAGLPDGAHENVSRPVAPSSCDGVAEHFLGRAAAVQRLFALMVGGRRRVAVVGERGIGKTQICLAACEYERARGVFGETFFCRLD 1063
            VD +D   ER  L+  +RE+ KR+ + SE A++ TFR+V   L    R LHF+GHGV G +  E+ +    F S+  + ++   GG  +                                                       + LVF+S+C SESVA+AFVS GVPHVV VS+  ++ DKKA EF+ +FY AL  G +V +AF + + + D++   D  +   +KF+LL  DGDH E+    +P+G     S P   + CD VAE F+GR+  V  ++  +V G R V++ GERGIGKT+I L   +Y   R +F   FF RL+
Sbjct:   52 VDIIDVKEERKLLVQCVRESKKRIVWHSEVADLHTFRKV---LSYGCRALHFSGHGVPGKVIFENKKCEAQFISQQELKDLLLAGGMEKFRPPLAINSDGSVSEPLPDGLDTSDSGGEESDGVSAHEIERGWIALEQHQRQRVPVKLVFVSACHSESVAEAFVSVGVPHVVVVSKDDKVLDKKAMEFSKAFYTALFAGHSVAKAFEIGQVQADISIMSDAGN---SKFKLLG-DGDHSEKLFRDVPEGKFIENSIPPPVNECDAVAEVFVGRSLEVHHVYKSLVEGARLVSITGERGIGKTEIALQCAQYAAERHLFKHIFFLRLE 370          
BLAST of mRNA_P-wetherbeei_contig6299.1.2 vs. uniprot
Match: A0A485LBF9_9STRA (Aste57867_18877 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBF9_9STRA)

HSP 1 Score: 165 bits (417), Expect = 3.690e-39
Identity = 109/311 (35.05%), Postives = 170/311 (54.66%), Query Frame = 2
Query:  155 HLFSAPLTQPQ--ASLGSXXXXXXXXXXXAEARGVDQLDHAAERDSLLHTLREANKRVAFFSEHAEVGTFRRVVGGLPRQPRLLHFTGHGVYGSLALEDGQGRLVFASRSAILEMASGGGAAQ----LVLVFLSSCFSESVADAFVSAGVPHVVAVSRSTQIPDKKAQEFAHSFYAALLRGDTVRQAFALARDRLDVAGGGDGYSGYGAKFRLLPEDGDHLERPL-AGLPDGAHENVSRPVAPSSCDGVAEHFLGRAAAVQRLFALMVGGRRRVAVVGERGIGKTQICLAACEYERARGVFGETFFCRLDA 1066
            HL S+PL   Q  AS+              + + ++ LD   ER  LL  L+E  K+V + SE A+V         +    R LHF+GHGV G +  E       F S+  +  +   G  +     + LVF+S+C SESVADAFVSAGVPHVV V +  ++ D+KA EF+ +FY ALL G +V ++F + + + D+    D ++ +   F+LL  +GDH    L + +P G +++++ P+  + CD VAE F+GR+  V  ++  +  G R  ++ G+ G+GKT+I L +C+Y   R +F   FF R+ A
Sbjct:    4 HLHSSPLVVRQTCASVNQPHNTSRPFGLSNDFQPIEILDVKEERRLLLQCLQECGKQVKWRSEVADV---------VSHGCRALHFSGHGVPGKVIFESASCEAHFLSQQELKTLLLAGDQSSPETAMRLVFVSACHSESVADAFVSAGVPHVVVVPKEDKVLDQKAMEFSKAFYTALLAGHSVLKSFEIGQVQADIVTVADRHNSH---FKLLG-NGDHATSHLFSDIPPGRYDDLTPPLPINECDAVAEVFVGRSIEVHAVYTALAEGARMASITGDAGMGKTEIALQSCQYATDRHLFEHIFFLRVRA 301          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6299.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A024US28_9STRA8.380e-4636.56SH2 domain-containing protein n=1 Tax=Aphanomyces ... [more]
T0RP06_SAPDV9.620e-4438.46SH2 domain-containing protein n=1 Tax=Saprolegnia ... [more]
A0A1V9Z989_9STRA1.230e-4337.62SH2 domain-containing protein n=1 Tax=Achlya hypog... [more]
W4HDL0_9STRA1.620e-4336.13SH2 domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A6G0XFL8_9STRA6.150e-4336.57Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
D8LEZ2_ECTSI1.330e-4245.56SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A1W0AAB8_9STRA2.130e-4237.42SH2 domain-containing protein n=1 Tax=Thraustothec... [more]
A0A5D6XJL3_9STRA2.970e-4234.25SH2 domain-containing protein n=1 Tax=Pythium bras... [more]
K3XA55_GLOUD1.740e-3934.66Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A485LBF9_9STRA3.690e-3935.05Aste57867_18877 protein n=1 Tax=Aphanomyces stella... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6299contigP-wetherbeei_contig6299:125..3372 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog112098.XP_008612470.1
PFAMsCHAT,Laminin_G_3,SH2
Model size1935
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue7.94e-45
EggNOG OGs2CNGK@1|root,2QW5N@2759|Eukaryota
Ec32 ortholog descriptionSH2 domain containing protein
Ec32 orthologEc-21_006100.1
DescriptionSrc homology 2 domains
Cds size1797
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6299.1.2prot_P-wetherbeei_contig6299.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6299 125..3236 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186902.8458207-CDS-P-wetherbeei_contig6299:124..10661683186902.8458207-CDS-P-wetherbeei_contig6299:124..1066Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6299 125..1066 -
1683186902.8583453-CDS-P-wetherbeei_contig6299:1425..16451683186902.8583453-CDS-P-wetherbeei_contig6299:1425..1645Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6299 1426..1645 -
1683186902.8665745-CDS-P-wetherbeei_contig6299:2057..21881683186902.8665745-CDS-P-wetherbeei_contig6299:2057..2188Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6299 2058..2188 -
1683186902.8744829-CDS-P-wetherbeei_contig6299:2521..27191683186902.8744829-CDS-P-wetherbeei_contig6299:2521..2719Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6299 2522..2719 -
1683186902.8894835-CDS-P-wetherbeei_contig6299:2930..32361683186902.8894835-CDS-P-wetherbeei_contig6299:2930..3236Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6299 2931..3236 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186902.8997507-UTR-P-wetherbeei_contig6299:3236..33721683186902.8997507-UTR-P-wetherbeei_contig6299:3236..3372Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6299 3237..3372 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6299.1.2

>prot_P-wetherbeei_contig6299.1.2 ID=prot_P-wetherbeei_contig6299.1.2|Name=mRNA_P-wetherbeei_contig6299.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=599bp
MHFLVCHLFSAPLTQPQASLGSGGGAGTGEGAQAEARGVDQLDHAAERDS
LLHTLREANKRVAFFSEHAEVGTFRRVVGGLPRQPRLLHFTGHGVYGSLA
LEDGQGRLVFASRSAILEMASGGGAAQLVLVFLSSCFSESVADAFVSAGV
PHVVAVSRSTQIPDKKAQEFAHSFYAALLRGDTVRQAFALARDRLDVAGG
GDGYSGYGAKFRLLPEDGDHLERPLAGLPDGAHENVSRPVAPSSCDGVAE
HFLGRAAAVQRLFALMVGGRRRVAVVGERGIGKTQICLAACEYERARGVF
GETFFCRLDAAAGGDARYFLRAGLGMTEPLPSGAAAAAAAMAAWFERRAA
AAAAVLTAANSERNALLGVAGEGEADYDCNSGSSGGSSGGGGASAMAEQE
SQFSYDVWSGADEAVGGSSGMAGESGRSASALVVEAAGVREMALRLLLVL
DGASPSILLGNERCSLEDFVLSLLDRCPYLSVLRTSTVTADAASAATAAA
AAAVAARSGSRASHPSSFGLSNAGAAPPSAVAAAAAAAVMATAAAARAAA
MAADTEEAVVPLEPLDAYSTAELFWRSSPRLLKMNEIVGVRGAAEAAAA
back to top

mRNA from alignment at P-wetherbeei_contig6299:125..3372-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6299.1.2 ID=mRNA_P-wetherbeei_contig6299.1.2|Name=mRNA_P-wetherbeei_contig6299.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3248bp|location=Sequence derived from alignment at P-wetherbeei_contig6299:125..3372- (Phaeothamnion wetherbeei SAG_119_79)
TACTTAGGCTACTTTCTCTCTTTTTAGGGAAACGTCCTTCATAAAACCAC TCTTTTCGCCTCTTCTCATCCTGGAAAGCATGCCTCTCTCGCCGAAGAGG CTCTGATCTTTTGGCAGCCCAGTAATTTTCACAAACATGCATTTCCTCGT GTGCCACCTCTTCTCGGCTCCATTGACGCAGCCTCAGGCCAGTCTGGGCA GTGGCGGCGGCGCAGGGACCGGGGAGGGAGCGCAGGCCGAGGCGAGGGGC GTGGATCAGCTGGATCACGCTGCGGAGCGCGATAGCCTTCTCCACACGCT TCGAGAGGCCAATAAGCGCGTCGCCTTCTTCTCGGAGCACGCGGAAGTGG GCACGTTTCGCCGGGTAGTCGGCGGCCTCCCGCGACAACCTCGCCTCCTC CATTTCACAGGCCACGGCGTGTACGGCTCCCTTGCGCTGGAAGTGAGGAG ATGCATCTGTAAAGAAATGGTCTCTTCGCGAACTTCCAATCTTTTGGTCT CAATTGCAAATTCTTTGATTTGCGTTTCCTCCTCCGCCTTGCAATGTTGG CGGCGGACATGAGCTTATTTCTGCGTTGAAACTTGGCTCGCACCAATTTC CGACCTTGAACTTCTTCCTGTGCTTCGCGGCTGGCCCGATTCTTTCGAGG CAGGACGGCCAGGGGAGGCTCGTCTTCGCGAGCCGCAGCGCCATCCTGGA GATGGCGAGCGGTGGCGGCGCTGCGCAGCTCGTCCTCGTCTTCCTGTCGT CGTGCTTCAGCGAGAGTGTCGCTGATGCCTTCGTATCGGCCGGCGTTCCG CACGTCGTCGCCGTCAGCCGCTCCACCCAGATTCCCGACAAGAAGGCACA GGTGAAGCAACGTGGTTGGTGTTTCGGCAGGTTCAGCCGGCAGGGAGATG TAGTCACCATCGCCACGGTCTATCGCTGCCTGACTAGCTATTGCCTGACA GGTGGCAGCATCGGGGTCTTCTAGGTGTGTTTGCCTTTGAGATCTGGAGT AAAAAGGGCTTCCTTCCTTCTTCGCCGTCACGTCTTCCTTGCCGCCCGAC TGTCCTTTCGTTTACCCTCTCTCATTCATGAAATCCGTTCCTGCGTCGTT GTTCTTAGTTTTGTTCCACCCTCCTCTCTGCTTTGCGTACCTGATGCCCT CGCACTGTGCCCGTGGGCATCGGCGGAGTGTCAGGAGTTTGCACACAGCT TCTACGCGGCGCTCTTGCGGGGCGACACGGTGCGGCAGGCCTTTGCCCTC GCGCGGGACCGGCTGGATGTTGCAGGAGGCGGCGACGGCTACTCCGGCTA CGGCGCAAAGTTCCGGTGAGGACCTTTGGGATTTGGAAAGAGAACAAAGC TTTGCAGAACATTTCTGCTTAACATTTCGGCTGAACGTTTCCGCAGAATG TTACCGCACAGCGTTTCCGGTGGACGATTCTTCTCTGCATTCTTCGCTTA AAGAAACCTAAGGGATTCTTTCTCGCAGCCTAGGTTCGCCTTGCCAGTCT ATGGTGCCGCTGTTGTGCCTCTTTGTTCGTCCATTGAGAAATTGTCTGTG TTTTTGACAATTTTTTGCTAGAACAATCGCAATTCCATGACGCCTCATTT TGCAAACCCGCTCTCCTACGCTCTCTACGACGCCTTGCGATTACATCATT GTCGGTTCTTTTGCAATGGCCTGGCCTGGCTGCTCCGCTTGTCAACCTCG TCGCATCGGGCGGGCGGGCGGCGGCAGGCTGCTGCCGGAGGACGGCGACC ACTTAGAGCGGCCGCTGGCGGGCCTTCCGGACGGCGCGCACGAGAACGTC AGCCGGCCCGTGGCCCCCAGCAGCTGCGACGGTGTCGCAGAACACTTCTT GGGGCGCGCAGCGGCGGTACAACGCCTGTTTGCGCTCATGGTCGGCGGCC GCCGGAGGGTCGCCGTCGTCGGGGAGAGGGGCATCGGCAAGACGCAGGTG AGTAGAGGTGATTGCGGACTTGAGAGCAGTCGCGGATGACAGCGGCGGTT GCGGTCGTGGCGGCGGGGGCGGAGCCCCCCGGCCGAGTGCGATGGGACGG CGCTGGTACTTACTAGAGTTTTACGGAATCGCTTTGGAGCTCAAGGGCGG CGCTTGGCCGGCGTCGCTGCAGTTGTGAAAGTTAGGCAGCTAGGCCAACG AGCACAGGATGCCGTGTCACCTTTGACTCGTTCCTTTTAAAGTGATGCGG CCGTTTTGAACCAACACAAACGTTTCGAGAGCCGTTTGGGGTTGCCTTTC ATTTCTTGTACGTGTCCGCGGTCTCTGCATTCATTGCCGGCGCCTCCCAT CACAAGATCTGCCTGGCGGCGTGCGAGTACGAGCGGGCGCGCGGCGTCTT CGGGGAGACGTTCTTCTGCCGCCTCGACGCTGCGGCCGGCGGCGATGCCC GCTACTTTCTCCGGGCGGGGCTCGGGATGACCGAGCCCCTGCCATCGGGG GCGGCGGCGGCGGCGGCGGCCATGGCCGCCTGGTTCGAGCGGCGTGCCGC CGCCGCAGCCGCCGTGCTGACGGCGGCAAATTCCGAGCGGAACGCATTGC TGGGCGTTGCTGGCGAGGGCGAAGCGGATTACGACTGCAACAGCGGCAGC AGTGGCGGCAGCAGTGGCGGCGGCGGCGCCTCTGCGATGGCCGAGCAGGA ATCGCAGTTTTCTTACGACGTTTGGTCAGGGGCGGACGAAGCGGTTGGGG GCTCCAGCGGAATGGCTGGAGAATCGGGGAGGTCGGCATCAGCATTGGTC GTTGAAGCAGCAGGAGTGCGGGAGATGGCGCTGCGGCTGCTGCTTGTTTT GGACGGCGCTTCGCCGTCAATTTTGCTGGGGAACGAGCGCTGCTCGCTAG AAGACTTTGTTCTTTCCCTCCTCGACCGCTGTCCGTACCTTTCGGTCCTC CGAACCTCCACTGTCACTGCGGATGCCGCCAGTGCCGCCACCGCCGCCGC AGCGGCCGCAGTGGCCGCGCGCTCGGGTAGCAGGGCAAGCCATCCATCGT CGTTCGGTCTGAGCAACGCTGGGGCTGCGCCACCTTCAGCAGTGGCCGCA GCGGCGGCGGCAGCGGTGATGGCGACAGCGGCCGCCGCCAGGGCGGCGGC CATGGCAGCGGACACAGAGGAAGCGGTCGTGCCGCTGGAGCCGCTTGACG CGTACAGCACCGCCGAGCTCTTTTGGCGCAGCAGCCCGCGGCTCTTGAAG ATGAACGAGATAGTGGGTGTCAGGGGAGCCGCCGAGGCGGCGGCGGCG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6299:125..3372-

>mRNA_P-wetherbeei_contig6299.1.2 ID=mRNA_P-wetherbeei_contig6299.1.2|Name=mRNA_P-wetherbeei_contig6299.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1797bp|location=Sequence derived from alignment at P-wetherbeei_contig6299:125..3372- (Phaeothamnion wetherbeei SAG_119_79)
ATGCATTTCCTCGTGTGCCACCTCTTCTCGGCTCCATTGACGCAGCCTCA
GGCCAGTCTGGGCAGTGGCGGCGGCGCAGGGACCGGGGAGGGAGCGCAGG
CCGAGGCGAGGGGCGTGGATCAGCTGGATCACGCTGCGGAGCGCGATAGC
CTTCTCCACACGCTTCGAGAGGCCAATAAGCGCGTCGCCTTCTTCTCGGA
GCACGCGGAAGTGGGCACGTTTCGCCGGGTAGTCGGCGGCCTCCCGCGAC
AACCTCGCCTCCTCCATTTCACAGGCCACGGCGTGTACGGCTCCCTTGCG
CTGGAAGACGGCCAGGGGAGGCTCGTCTTCGCGAGCCGCAGCGCCATCCT
GGAGATGGCGAGCGGTGGCGGCGCTGCGCAGCTCGTCCTCGTCTTCCTGT
CGTCGTGCTTCAGCGAGAGTGTCGCTGATGCCTTCGTATCGGCCGGCGTT
CCGCACGTCGTCGCCGTCAGCCGCTCCACCCAGATTCCCGACAAGAAGGC
ACAGGAGTTTGCACACAGCTTCTACGCGGCGCTCTTGCGGGGCGACACGG
TGCGGCAGGCCTTTGCCCTCGCGCGGGACCGGCTGGATGTTGCAGGAGGC
GGCGACGGCTACTCCGGCTACGGCGCAAAGTTCCGGCTGCTGCCGGAGGA
CGGCGACCACTTAGAGCGGCCGCTGGCGGGCCTTCCGGACGGCGCGCACG
AGAACGTCAGCCGGCCCGTGGCCCCCAGCAGCTGCGACGGTGTCGCAGAA
CACTTCTTGGGGCGCGCAGCGGCGGTACAACGCCTGTTTGCGCTCATGGT
CGGCGGCCGCCGGAGGGTCGCCGTCGTCGGGGAGAGGGGCATCGGCAAGA
CGCAGATCTGCCTGGCGGCGTGCGAGTACGAGCGGGCGCGCGGCGTCTTC
GGGGAGACGTTCTTCTGCCGCCTCGACGCTGCGGCCGGCGGCGATGCCCG
CTACTTTCTCCGGGCGGGGCTCGGGATGACCGAGCCCCTGCCATCGGGGG
CGGCGGCGGCGGCGGCGGCCATGGCCGCCTGGTTCGAGCGGCGTGCCGCC
GCCGCAGCCGCCGTGCTGACGGCGGCAAATTCCGAGCGGAACGCATTGCT
GGGCGTTGCTGGCGAGGGCGAAGCGGATTACGACTGCAACAGCGGCAGCA
GTGGCGGCAGCAGTGGCGGCGGCGGCGCCTCTGCGATGGCCGAGCAGGAA
TCGCAGTTTTCTTACGACGTTTGGTCAGGGGCGGACGAAGCGGTTGGGGG
CTCCAGCGGAATGGCTGGAGAATCGGGGAGGTCGGCATCAGCATTGGTCG
TTGAAGCAGCAGGAGTGCGGGAGATGGCGCTGCGGCTGCTGCTTGTTTTG
GACGGCGCTTCGCCGTCAATTTTGCTGGGGAACGAGCGCTGCTCGCTAGA
AGACTTTGTTCTTTCCCTCCTCGACCGCTGTCCGTACCTTTCGGTCCTCC
GAACCTCCACTGTCACTGCGGATGCCGCCAGTGCCGCCACCGCCGCCGCA
GCGGCCGCAGTGGCCGCGCGCTCGGGTAGCAGGGCAAGCCATCCATCGTC
GTTCGGTCTGAGCAACGCTGGGGCTGCGCCACCTTCAGCAGTGGCCGCAG
CGGCGGCGGCAGCGGTGATGGCGACAGCGGCCGCCGCCAGGGCGGCGGCC
ATGGCAGCGGACACAGAGGAAGCGGTCGTGCCGCTGGAGCCGCTTGACGC
GTACAGCACCGCCGAGCTCTTTTGGCGCAGCAGCCCGCGGCTCTTGAAGA
TGAACGAGATAGTGGGTGTCAGGGGAGCCGCCGAGGCGGCGGCGGCG
back to top