prot_P-wetherbeei_contig6290.3.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6290.3.2
Unique Nameprot_P-wetherbeei_contig6290.3.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length310
Homology
BLAST of mRNA_P-wetherbeei_contig6290.3.2 vs. uniprot
Match: A0A0P9ELP4_RHOGW (PHD-type domain-containing protein (Fragment) n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A0P9ELP4_RHOGW)

HSP 1 Score: 102 bits (253), Expect = 5.500e-24
Identity = 35/52 (67.31%), Postives = 44/52 (84.62%), Query Frame = 0
Query:  235 DPHEPKYCFCERTAFGEMVGCDSDDCEREWFHFGCVGLKDMPEGKWYCSECV 286
            DP+EP YC+C+R +FGEM+ C++DDC REWFH GCVGL+  PEGKWYC +CV
Sbjct:    1 DPNEPTYCYCDRVSFGEMIACENDDCSREWFHLGCVGLEHAPEGKWYCDDCV 52          
BLAST of mRNA_P-wetherbeei_contig6290.3.2 vs. uniprot
Match: S8CQY0_9LAMI (PHD-type domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CQY0_9LAMI)

HSP 1 Score: 103 bits (256), Expect = 1.320e-23
Identity = 37/53 (69.81%), Postives = 46/53 (86.79%), Query Frame = 0
Query:  234 VDPHEPKYCFCERTAFGEMVGCDSDDCEREWFHFGCVGLKDMPEGKWYCSECV 286
            VDP+EP YCFC + ++GEMV CD+ DC+ EWFH+GCVGLK+ P+GKWYCSECV
Sbjct:   71 VDPNEPTYCFCSQVSYGEMVACDNPDCKIEWFHYGCVGLKEQPKGKWYCSECV 123          
BLAST of mRNA_P-wetherbeei_contig6290.3.2 vs. uniprot
Match: A0A5C7ITF2_9ROSI (PHD finger protein ING n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7ITF2_9ROSI)

HSP 1 Score: 104 bits (260), Expect = 8.660e-23
Identity = 38/54 (70.37%), Postives = 47/54 (87.04%), Query Frame = 0
Query:  234 VDPHEPKYCFCERTAFGEMVGCDSDDCEREWFHFGCVGLKDMPEGKWYCSECVA 287
            VDP+EP YCFC + ++GEMV CD+ +C+ EWFHFGCVGLK+ P+GKWYCSECVA
Sbjct:  202 VDPNEPTYCFCNQVSYGEMVACDNQECKIEWFHFGCVGLKEQPKGKWYCSECVA 255          
BLAST of mRNA_P-wetherbeei_contig6290.3.2 vs. uniprot
Match: UPI00190508A2 (uncharacterized protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI00190508A2)

HSP 1 Score: 98.6 bits (244), Expect = 1.150e-22
Identity = 33/52 (63.46%), Postives = 45/52 (86.54%), Query Frame = 0
Query:  234 VDPHEPKYCFCERTAFGEMVGCDSDDCEREWFHFGCVGLKDMPEGKWYCSEC 285
            VDP+EP+YC+C + ++GEMV CD++DCEREWFH+GC GLK+ P+ KWYC +C
Sbjct:    3 VDPNEPRYCYCTQVSYGEMVACDNEDCEREWFHYGCAGLKEAPKHKWYCRDC 54          
BLAST of mRNA_P-wetherbeei_contig6290.3.2 vs. uniprot
Match: A0A7J7LEV2_9MAGN (PHD finger protein ING n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7LEV2_9MAGN)

HSP 1 Score: 103 bits (256), Expect = 1.760e-22
Identity = 36/53 (67.92%), Postives = 46/53 (86.79%), Query Frame = 0
Query:  234 VDPHEPKYCFCERTAFGEMVGCDSDDCEREWFHFGCVGLKDMPEGKWYCSECV 286
            VDP+EP YCFC++ ++GEMV CD++DC  EWFH+GCVGLKD P+GKWYCS+C 
Sbjct:  173 VDPNEPTYCFCKQVSYGEMVACDNEDCNIEWFHYGCVGLKDQPKGKWYCSDCA 225          
BLAST of mRNA_P-wetherbeei_contig6290.3.2 vs. uniprot
Match: UPI001CFB3E5F (PHD finger protein ING1-like n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CFB3E5F)

HSP 1 Score: 103 bits (256), Expect = 2.330e-22
Identity = 37/54 (68.52%), Postives = 46/54 (85.19%), Query Frame = 0
Query:  234 VDPHEPKYCFCERTAFGEMVGCDSDDCEREWFHFGCVGLKDMPEGKWYCSECVA 287
            VDP+EP YCFC + ++GEMV CD+ DC+ EWFHFGCVGLK+ P+GKWYCS+C A
Sbjct:  186 VDPNEPTYCFCNQVSYGEMVACDNTDCKIEWFHFGCVGLKEQPKGKWYCSDCAA 239          
BLAST of mRNA_P-wetherbeei_contig6290.3.2 vs. uniprot
Match: A0A8B8MD88_ABRPR (PHD finger protein ING n=2 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8MD88_ABRPR)

HSP 1 Score: 102 bits (254), Expect = 3.410e-22
Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 0
Query:  234 VDPHEPKYCFCERTAFGEMVGCDSDDCEREWFHFGCVGLKDMPEGKWYCSECVA 287
            VDP+EP YCFC + ++GEMV CD+ DC+ EWFHFGCVGLK+ P+GKWYCS C A
Sbjct:  173 VDPNEPTYCFCNQVSYGEMVACDNPDCKIEWFHFGCVGLKEQPKGKWYCSNCAA 226          
BLAST of mRNA_P-wetherbeei_contig6290.3.2 vs. uniprot
Match: A0A2K3PS10_TRIPR (PHD finger protein ING n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3PS10_TRIPR)

HSP 1 Score: 102 bits (253), Expect = 3.550e-22
Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 0
Query:  234 VDPHEPKYCFCERTAFGEMVGCDSDDCEREWFHFGCVGLKDMPEGKWYCSECVA 287
            VDP+EP YCFC + ++GEMV CD+ DC+ EWFHFGCVGLK+ P+GKWYCS C A
Sbjct:  160 VDPNEPTYCFCNQVSYGEMVACDNPDCKIEWFHFGCVGLKEQPKGKWYCSTCAA 213          
BLAST of mRNA_P-wetherbeei_contig6290.3.2 vs. uniprot
Match: A0A6P5NBZ1_ARADU (PHD finger protein ING n=9 Tax=Arachis TaxID=3817 RepID=A0A6P5NBZ1_ARADU)

HSP 1 Score: 102 bits (254), Expect = 3.800e-22
Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 0
Query:  234 VDPHEPKYCFCERTAFGEMVGCDSDDCEREWFHFGCVGLKDMPEGKWYCSECVA 287
            VDP+EP YCFC + ++GEMV CD+ DC+ EWFHFGCVGLK+ P+GKWYCS C A
Sbjct:  178 VDPNEPTYCFCNQVSYGEMVACDNPDCKIEWFHFGCVGLKEQPKGKWYCSNCAA 231          
BLAST of mRNA_P-wetherbeei_contig6290.3.2 vs. uniprot
Match: UPI000DEC5363 (PHD finger protein ING1 isoform X1 n=1 Tax=Arachis hypogaea TaxID=3818 RepID=UPI000DEC5363)

HSP 1 Score: 102 bits (254), Expect = 4.050e-22
Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 0
Query:  234 VDPHEPKYCFCERTAFGEMVGCDSDDCEREWFHFGCVGLKDMPEGKWYCSECVA 287
            VDP+EP YCFC + ++GEMV CD+ DC+ EWFHFGCVGLK+ P+GKWYCS C A
Sbjct:  181 VDPNEPTYCFCNQVSYGEMVACDNPDCKIEWFHFGCVGLKEQPKGKWYCSNCAA 234          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6290.3.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0P9ELP4_RHOGW5.500e-2467.31PHD-type domain-containing protein (Fragment) n=1 ... [more]
S8CQY0_9LAMI1.320e-2369.81PHD-type domain-containing protein (Fragment) n=1 ... [more]
A0A5C7ITF2_9ROSI8.660e-2370.37PHD finger protein ING n=1 Tax=Acer yangbiense Tax... [more]
UPI00190508A21.150e-2263.46uncharacterized protein n=1 Tax=Cantharellus anzut... [more]
A0A7J7LEV2_9MAGN1.760e-2267.92PHD finger protein ING n=1 Tax=Kingdonia uniflora ... [more]
UPI001CFB3E5F2.330e-2268.52PHD finger protein ING1-like n=2 Tax=Anacardiaceae... [more]
A0A8B8MD88_ABRPR3.410e-2268.52PHD finger protein ING n=2 Tax=Abrus precatorius T... [more]
A0A2K3PS10_TRIPR3.550e-2268.52PHD finger protein ING n=1 Tax=Trifolium pratense ... [more]
A0A6P5NBZ1_ARADU3.800e-2268.52PHD finger protein ING n=9 Tax=Arachis TaxID=3817 ... [more]
UPI000DEC53634.050e-2268.52PHD finger protein ING1 isoform X1 n=1 Tax=Arachis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 84..121
NoneNo IPR availablePIRSRPIRSR628651-51PIRSR628651-51coord: 5..296
e-value: 3.5E-34
score: 116.5
NoneNo IPR availablePIRSRPIRSR628651-50PIRSR628651-50coord: 5..296
e-value: 3.5E-34
score: 116.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..196
NoneNo IPR availableCDDcd15587PHD_Yng1p_likecoord: 241..285
e-value: 6.67227E-25
score: 92.8633
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 241..286
e-value: 4.5E-11
score: 52.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 233..288
e-value: 2.3E-24
score: 87.0
IPR028651ING familyPANTHERPTHR10333INHIBITOR OF GROWTH PROTEINcoord: 5..286
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 242..285
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 239..288
score: 9.0183
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 230..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6290contigP-wetherbeei_contig6290:1853..3264 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6290.3.2mRNA_P-wetherbeei_contig6290.3.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6290 1502..3496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6290.3.2 ID=prot_P-wetherbeei_contig6290.3.2|Name=mRNA_P-wetherbeei_contig6290.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=310bp
MVGESEQFQLATAAYDAVDAAFVVLDTAIRSFDEDAEQTTGRPLSRSLVP
PAAPASTCATSGDMAAAAAGLLRVASSSGSAQPRSALAVQAARAEEHAAM
LENKAEKAEEALAAFADKRENGKRGKKTKGEIAASERVAKLWEKARAARD
RAETLARQAAPQLAQLERAAREAARGSKAGAAAAARGGGGGGRKDKGKSK
AGAANAAANAAAAAAAAAAAAAGAGVEAAAVEYVDPHEPKYCFCERTAFG
EMVGCDSDDCEREWFHFGCVGLKDMPEGKWYCSECVAAGADKASKDGDGD
DADGGDHGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR028651ING_fam
IPR019786Zinc_finger_PHD-type_CS
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD