prot_P-wetherbeei_contig6280.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig6280.1.1
Unique Name	prot_P-wetherbeei_contig6280.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	360

Homology

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BLAST of mRNA_P-wetherbeei_contig6280.1.1 vs. uniprot
Match: A0A7S2RUF9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUF9_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 9.660e-10
Identity = 105/382 (27.49%), Postives = 149/382 (39.01%), Query Frame = 0

Query:    9 GDGSPATYAAVTQGALAAYEPLRQQIAANV---------ERQPGLLASIMEENGRFVRAKAADAVTLAREAFLQRLHRGQDVYFELHAQLSEGSGFYGDLLRRLAQLNQRSEDLCYTQSVQRRDFEVQFSHQEERARQQAQDEELARHMAAGVDLRGAGPTAAAGSPPAAXXXXXXXXXXXXXTMQQQPGQYNPYNRPLP-QTPQMLATSQAPG----------GGGGNPFSAPAPYVPLPGYQGGYGGQNGGWPPQLQQ----PPQXQP---MPQFVQQQXXXXXXXXXXXXXXXXXXXXXXXXXSYYEQQSAAAPGMPXQQAQQGFYLPPGYNQS-----GMDPKVARMVEMGFPVERARNALSACGGDQEAAVSKLLSE 358
            GDG+  + AA ++  L   E +R ++ A           E Q   +A +M +N  F +A+ AD  TL R+  +Q ++     + + H+QLS+ S FYGDLL RL Q+    E   Y Q V R++F  Q    + +  Q+  D  LA+ +A  + +    P  A  + PA               M   PG   P    +  QTP M   S A G           G     +  AP  P   YQ G G    G+PP        PP   P    P                                Y        P      A   +Y P     S     G +PKVAR++EMGFP ++   AL A   ++EAA ++LLSE
Sbjct:  603 GDGAGISTAAPSKELLTMLEDVRAKVLAPASLAPLKEAREEQERQVAEVMAKNHEFTQARNADETTLKRQQIIQGVNAVVTKFSDFHSQLSDASYFYGDLLARLQQIMNAIEGYVYAQQVVRQEFLEQQDAAKSKQSQEDLDAALAQRLAQELQM----PPPAFPAGPATPGVPAHAAG-----MASFPGPRPPSTDAIAFQTPAMGQYSTATGPPVHGFGASAAGAXXXXTTAAP--PSYSYQPGSGLGAPGYPPPSNSLGHMPPPTMPGAYSPSSYSMPSSTGPPFPAVLNTAAGQPAFTGAPPGYSAXXXXXXPAYGASPAP-AYYSPHPVAGSMPGGLGSNPKVARLMEMGFPQDKVVAALRAHNDNEEAAANQLLSE 972

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig6280.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig6280.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A7S2RUF9_9STRA	9.660e-10	27.49	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 320..357 e-value: 1.0E-6 score: 38.3
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 324..353 e-value: 2.6E-8 score: 33.6
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 319..358 score: 12.811962
None	No IPR available	GENE3D	1.20.140.50	alix/aip1 like domains	coord: 9..116 e-value: 1.9E-13 score: 52.8
None	No IPR available	GENE3D	1.10.8.10		coord: 320..358 e-value: 1.3E-9 score: 39.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 285..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..178
IPR025304	ALIX V-shaped domain	PFAM	PF13949	ALIX_LYPXL_bnd	coord: 10..118 e-value: 2.2E-19 score: 69.9
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 320..358

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig6280	contig	P-wetherbeei_contig6280:10..1089 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig6280.1.1	mRNA_P-wetherbeei_contig6280.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig6280 2..1276 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig6280.1.1 ID=prot_P-wetherbeei_contig6280.1.1|Name=mRNA_P-wetherbeei_contig6280.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=360bp
MEAAMAGGGDGSPATYAAVTQGALAAYEPLRQQIAANVERQPGLLASIME
ENGRFVRAKAADAVTLAREAFLQRLHRGQDVYFELHAQLSEGSGFYGDLL
RRLAQLNQRSEDLCYTQSVQRRDFEVQFSHQEERARQQAQDEELARHMAA
GVDLRGAGPTAAAGSPPAAPPAGPVQYPPSYPTMQQQPGQYNPYNRPLPQ
TPQMLATSQAPGGGGGNPFSAPAPYVPLPGYQGGYGGQNGGWPPQLQQPP
QQQPMPQFVQQQHQQYNQQPLAPHHPPPQQPQQPQQPSYYEQQSAAAPGM
PPQQAQQGFYLPPGYNQSGMDPKVARMVEMGFPVERARNALSACGGDQEA
AVSKLLSEG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015940	UBA
IPR025304	ALIX_V_dom
IPR009060	UBA-like_sf