mRNA_P-wetherbeei_contig6274.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6274.1.1 vs. uniprot
Match: A0A6A3N8M8_9STRA (Laminin IV type A domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3N8M8_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.810e-22 Identity = 62/169 (36.69%), Postives = 90/169 (53.25%), Query Frame = 1
Query: 1 LAPGTPSASGFYPCGRVYGNVWHLAASPTFLAALRSPAAYGGSLEFSLVSASGGDAESLRPGRGTVVLTAADGRGMSFTSLFPPPRTGGGYESGGSSSRSYVSAVLREDSGWVSEPDGAEILHQDFHSRLQTATELLIRGDLWSYGGGGRPASASGQEVVHFGAVTLRA 507
L P +PCG V+ NVWH +A TF A L+ AYGG L+F L++ S + R G+ +++ + +DG + G ++ +S ++ S VLRED GW++EPD A + +F + L TAT L IRGD+W Y +S GQEVV+ V L A
Sbjct: 3115 LRGAVPRLDAAFPCGPVFSNVWHFSAPVTFTAKLKG--AYGGRLQFRLMAPSFNGSPRPRRGQVSILSSGSDGVATRISVAL------GSFDLPSASRWTFYSVVLREDFGWITEPDAASLTSDEFQAVLATATALWIRGDVWGY-----DSSGPGQEVVYLNDVALYA 3270
BLAST of mRNA_P-wetherbeei_contig6274.1.1 vs. uniprot
Match: A0A329S628_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S628_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.570e-21 Identity = 59/164 (35.98%), Postives = 91/164 (55.49%), Query Frame = 1
Query: 16 PSASGFYPCGRVYGNVWHLAASPTFLAALRSPAAYGGSLEFSLVSASGGDAESLRPGRGTVVLTAADGRGMSFTSLFPPPRTGGGYESGGSSSRSYVSAVLREDSGWVSEPDGAEILHQDFHSRLQTATELLIRGDLWSYGGGGRPASASGQEVVHFGAVTLRA 507
P +PCG V+ N+WH +AS TF++ L++ AYGG L++ L++ S + R G+ ++ T +DG ++ G ++ +S +Y S VLRED GW++EPDG + F + L+ AT L IRGD+W Y ++ GQEVV+ V L A
Sbjct: 3108 PRLDATFPCGPVFSNIWHFSASATFVSTLKT--AYGGRLQYRLLAPSFNGSPRPRRGQVSIFSTNSDGDLTQISAAL------GSFDLPSASHWTYYSVVLREDFGWITEPDGNTLTAAKFGAVLEGATALWIRGDIWGY-----DSTGPGQEVVYLNDVALYA 3258
BLAST of mRNA_P-wetherbeei_contig6274.1.1 vs. uniprot
Match: A0A8J5M810_9STRA (Laminin IV type A domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M810_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 9.850e-21 Identity = 58/164 (35.37%), Postives = 90/164 (54.88%), Query Frame = 1
Query: 16 PSASGFYPCGRVYGNVWHLAASPTFLAALRSPAAYGGSLEFSLVSASGGDAESLRPGRGTVVLTAADGRGMSFTSLFPPPRTGGGYESGGSSSRSYVSAVLREDSGWVSEPDGAEILHQDFHSRLQTATELLIRGDLWSYGGGGRPASASGQEVVHFGAVTLRA 507
P +PCG V+ N+WH +A TF++ L++ AYGG L++ L++ S + R G+ ++ T +DG ++ G ++ +S +Y S VLRED GW++EPDG + F + L+ AT L IRGD+W Y ++ GQEVV+ V L A
Sbjct: 2100 PRLDATFPCGPVFSNIWHFSAPATFVSTLKT--AYGGRLQYRLLAPSFNGSPRPRRGQVSIFSTNSDGVLTQISAAL------GSFDLPSASHWTYYSVVLREDFGWITEPDGDTLTAAKFGAVLEGATALWIRGDIWGY-----DSTGPGQEVVYLNDVALYA 2250
BLAST of mRNA_P-wetherbeei_contig6274.1.1 vs. uniprot
Match: A0A2D4BI64_PYTIN (Calx-beta domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BI64_PYTIN) HSP 1 Score: 97.4 bits (241), Expect = 2.300e-20 Identity = 69/172 (40.12%), Postives = 88/172 (51.16%), Query Frame = 1
Query: 1 LAPGT-PSASGFYPCGRVYGNVWHLAASPTFLAALRSPAAYGGSLEFSLVSASGGDAESLRPGRGTVVLTAADGRGMSFTSLFPPPRTGGGYESGGSSSRSYVSAVLREDSGWVSEPDGAEILHQDFHSRLQTATELLIRGDLWSYGGGGRPASASGQEVVHFGAVTLRAPP 513
L PG P + +PCG+VY NVWH AAS + + AL P YGG L+F L++ S S RP RG + + ++ G +S GG+ SS + S +LRED GW+ EP G + F L AT L IRGDLW Y A GQEVV+ V L A P
Sbjct: 734 LTPGVVPVVNPSFPCGQVYSNVWHFAASQSIVNAL--PQVYGGRLQFRLLAQSLNG--SPRPRRGQISIFSSAGVQISLAL--------GGFPLPDPSSWTAYSVILREDFGWIQEPGGEPASTELFRQVLAQATALWIRGDLWGYS-----AQGPGQEVVYINDVKLFARP 888
BLAST of mRNA_P-wetherbeei_contig6274.1.1 vs. uniprot
Match: H3H1E4_PHYRM (Laminin IV type A domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1E4_PHYRM) HSP 1 Score: 97.4 bits (241), Expect = 2.540e-20 Identity = 64/164 (39.02%), Postives = 85/164 (51.83%), Query Frame = 1
Query: 16 PSASGFYPCGRVYGNVWHLAASPTFLAALRSPAAYGGSLEFSLVSASGGDAESLRPGRGTVVLTAADGRGMSFTSLFPPPRTGGGYESGGSSSRSYVSAVLREDSGWVSEPDGAEILHQDFHSRLQTATELLIRGDLWSYGGGGRPASASGQEVVHFGAVTLRA 507
P +PCG V+ NVWH +A F L AAYGG L+F L++ S S RP RG V + + G++ G ++ +S +Y S VLRED GW++EPDGA I F + L AT L IRGD+W Y + +GQEVV+ V L A
Sbjct: 3515 PRLDATFPCGPVFANVWHFSAPAAFTTKLA--AAYGGRLQFRLLAPSFNG--SPRPRRGQVAIFGKNADGIATQMSVAL----GSFDLPSASRWTYYSVVLREDFGWITEPDGASITAAAFKAVLGGATRLWIRGDIWGY-----DPTGAGQEVVYLNDVVLLA 3665
BLAST of mRNA_P-wetherbeei_contig6274.1.1 vs. uniprot
Match: A0A0P1AEQ6_PLAHL (Concanavalin A-like lectin/glucanase, subgroup n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEQ6_PLAHL) HSP 1 Score: 95.9 bits (237), Expect = 8.690e-20 Identity = 59/156 (37.82%), Postives = 83/156 (53.21%), Query Frame = 1
Query: 34 YPCGRVYGNVWHLAASPTFLAALRSPAAYGGSLEFSLVSASGGDAESLRPGRGTVVLTAADGRGMSFTSLFPPPRTGGGYESGGSSSRSYVSAVLREDSGWVSEPDGAEILHQDFHSRLQTATELLIRGDLWSYGGGGRPASASGQEVVHFGAVTL 501
+PCG VY N+WH A TF+ L+ AYGG L++ L+++S RP RG V + + + G+ G ++ S+ +Y S VLRED GW++EPDG + DF L AT L IRGD+W Y ++ GQEVV+ V L
Sbjct: 3105 FPCGPVYSNIWHFTAPATFVTKLKL--AYGGRLQYRLLASSFNGTP--RPRRGQVSIFSTNTAGLQNQISIAL----GSFDLPSLSNWTYYSIVLREDFGWITEPDGKTLTLADFKESLDGATALWIRGDIWGY-----DSTGPGQEVVYLNDVAL 3247
BLAST of mRNA_P-wetherbeei_contig6274.1.1 vs. uniprot
Match: A0A225WDI6_9STRA (Laminin IV type A domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDI6_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.610e-19 Identity = 60/170 (35.29%), Postives = 88/170 (51.76%), Query Frame = 1
Query: 1 LAPGT-PSASGFYPCGRVYGNVWHLAASPTFLAALRSPAAYGGSLEFSLVSASGGDAESLRPGRGTVVLTAADGRGMSFTSLFPPPRTGGGYESGGSSSRSYVSAVLREDSGWVSEPDGAEILHQDFHSRLQTATELLIRGDLWSYGGGGRPASASGQEVVHFGAVTLRA 507
L PG P +PCG V+ N+W +A F + L++ AYGG L+F L++ S + R G+ ++ T+ G + G ++ + S +Y S VLRED GW+SEP+G + F + L AT LLIRGD+W Y ++ SGQE V+ V L A
Sbjct: 3335 LLPGEIPRLDSAFPCGPVFANIWQFSAPVQFTSKLKN--AYGGRLQFRLLAPSFNGSPRPRRGQLSIFSTSNTGAQSQMSVAL------GSFDLPSALSWTYYSVVLREDFGWISEPNGTSLSSAQFQTLLHDATTLLIRGDMWGY-----DSTGSGQEAVYLNDVALYA 3491
BLAST of mRNA_P-wetherbeei_contig6274.1.1 vs. uniprot
Match: W2QEP3_PHYPN (LamGL domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QEP3_PHYPN) HSP 1 Score: 94.0 bits (232), Expect = 4.070e-19 Identity = 57/162 (35.19%), Postives = 85/162 (52.47%), Query Frame = 1
Query: 16 PSASGFYPCGRVYGNVWHLAASPTFLAALRSPAAYGGSLEFSLVSASGGDAESLRPGRGTVVLTAADGRGMSFTSLFPPPRTGGGYESGGSSSRSYVSAVLREDSGWVSEPDGAEILHQDFHSRLQTATELLIRGDLWSYGGGGRPASASGQEVVHFGAVTL 501
P +PCG V+ N+WH +A F++ L+ AYGG L++ L++ S + R G+ ++ T +DG ++ G + +S +Y S VLRED GW++EPDG + +F + L AT L IRGD+W Y G GQEVV+ V L
Sbjct: 3098 PRLDATFPCGPVFSNIWHFSAPAIFVSKLKD--AYGGRLQYRLLAPSFNGSPRPRRGQVSIFSTNSDGVVTQISAAL------GSFNLPSASPWTYYSVVLREDFGWITEPDGDTLSAAEFGAVLDGATVLWIRGDIWGYDSNG-----PGQEVVYLNDVAL 3246
BLAST of mRNA_P-wetherbeei_contig6274.1.1 vs. uniprot
Match: D0MSJ7_PHYIT (LamGL domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MSJ7_PHYIT) HSP 1 Score: 92.8 bits (229), Expect = 1.020e-18 Identity = 55/162 (33.95%), Postives = 86/162 (53.09%), Query Frame = 1
Query: 16 PSASGFYPCGRVYGNVWHLAASPTFLAALRSPAAYGGSLEFSLVSASGGDAESLRPGRGTVVLTAADGRGMSFTSLFPPPRTGGGYESGGSSSRSYVSAVLREDSGWVSEPDGAEILHQDFHSRLQTATELLIRGDLWSYGGGGRPASASGQEVVHFGAVTL 501
P +PCG V+ ++WH +A + + L+ AAYGG L++ L++ S + R G+ ++ T + G ++ G ++ +S +Y S VLRED GW++EPDG + +F + L AT L IRGD+W Y +S GQEVV+ V L
Sbjct: 2773 PRLDAAFPCGPVFSSIWHFSAPASLITKLK--AAYGGRLQYRLLTPSFNGSPRPRRGQVSIFSTTSIGAVTQISAAL------GSFDLPSASRWTYYSVVLREDFGWIAEPDGGALTAAEFGAVLDGATALWIRGDIWGY-----DSSGPGQEVVYLNDVEL 2921 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6274.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6274.1.1 >prot_P-wetherbeei_contig6274.1.1 ID=prot_P-wetherbeei_contig6274.1.1|Name=mRNA_P-wetherbeei_contig6274.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=172bp LAPGTPSASGFYPCGRVYGNVWHLAASPTFLAALRSPAAYGGSLEFSLVSback to top mRNA from alignment at P-wetherbeei_contig6274:218..733+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6274.1.1 ID=mRNA_P-wetherbeei_contig6274.1.1|Name=mRNA_P-wetherbeei_contig6274.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig6274:218..733+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6274:218..733+ >mRNA_P-wetherbeei_contig6274.1.1 ID=mRNA_P-wetherbeei_contig6274.1.1|Name=mRNA_P-wetherbeei_contig6274.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig6274:218..733+ (Phaeothamnion wetherbeei SAG_119_79)back to top |