mRNA_P-wetherbeei_contig627.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig627.4.2
Unique NamemRNA_P-wetherbeei_contig627.4.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig627.4.2 vs. uniprot
Match: A0A835ZEN1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN1_9STRA)

HSP 1 Score: 382 bits (980), Expect = 2.570e-127
Identity = 185/234 (79.06%), Postives = 207/234 (88.46%), Query Frame = 3 
Query:  369 VLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVQQLARDFLHNFYQVTVGSTELSANKDIKQYVEVVEDYDKYRKLQGYLREHNSGGRVLIFVETKKGCDALTRSLRGDGWPARCIHGDKSQEERDWVLKDFKEGNTNMLIATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGTSVSFFGSKNSRCARELVKILSESGNSVPPEISQLSSGGGGG 1070
            VLDEADRMLDMGFEPQ+RKIV QIRPDRQTLMWSATWPKEVQ LARDFL N+YQVTVGS +LSANKDI+QYVEV+ED+DKY KL  YLREHN GGRVLIFVETKKG D L RSLR DGWPA  IHGDK+Q+ERD+ LK+F+EG  NML+ATDVA+RG+DVKDI+MVINFDFPNN+EDYIHRIGR  RAGAKGTSV+FF SKN+RCAR+L KILSESGN VPP ++ +S G  GG
Sbjct:  213 VLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMWSATWPKEVQALARDFLTNYYQVTVGSLDLSANKDIRQYVEVLEDWDKYSKLLQYLREHNDGGRVLIFVETKKGADQLVRSLRADGWPANAIHGDKTQDERDYALKEFREGRKNMLVATDVASRGIDVKDIRMVINFDFPNNLEDYIHRIGRTARAGAKGTSVAFFTSKNARCARDLAKILSESGNDVPPALAGMSGGSYGG 446
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BLAST of mRNA_P-wetherbeei_contig627.4.2 vs. uniprot
Match: D7FGZ5_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGZ5_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 2.770e-126
Identity = 183/227 (80.62%), Postives = 205/227 (90.31%), Query Frame = 3 
Query:  369 VLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVQQLARDFLHNFYQVTVGSTELSANKDIKQYVEVVEDYDKYRKLQGYLREHNSGGRVLIFVETKKGCDALTRSLRGDGWPARCIHGDKSQEERDWVLKDFKEGNTNMLIATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGTSVSFFGSKNSRCARELVKILSESGNSVPPEISQL 1049
            VLDEADRMLDMGFEPQ+RKIVSQIRPDRQTLMWSATWPKEVQ LARDFLH++YQVTVGS EL+ANKDIKQ +E  ED++KYR L  +L++H   G+VL+FVETKKGCDALTRSLR DG+ ARCIHGDK+QEERD+VLKDFK GN  +L+ATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKG +VSFFGSKNSR  REL+KIL+ES N VPPE+ Q+
Sbjct:  278 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQQHGHNGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQM 504
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BLAST of mRNA_P-wetherbeei_contig627.4.2 vs. uniprot
Match: A0A6H5KBB2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBB2_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 2.660e-120
Identity = 174/232 (75.00%), Postives = 202/232 (87.07%), Query Frame = 3 
Query:  369 VLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVQQLARDFLHNFYQVTVGSTELSANKDIKQYVEVVEDYDKYRKLQGYLREHNSGGRVLIFVETKKGCDALTRSLRGDGWPARCIHGDKSQEERDWVLKDFKEGNTNMLIATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGTSVSFFGSKNSRCARELVKILSESGNSVPPEISQLSSGGG 1064
            VLDEADRMLDMGFEPQ+R IVSQIRPDRQTLMWSATWPKEV+ LARDFL N+YQVTVGS ELSANKDI+Q +E+VED+ KYR L  +L+EHN+ GRVLIFVETKKGCDALTRSLR +GWPA  IHGDK+Q ERD VL DFKEG + +L+ATDVAARGLDVKDI+MVINFDFP  ME Y+HRIGRCGRAG KGT++SFF +KNS+CAREL++IL ++   VP E+S ++ GGG
Sbjct:  175 VLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLELSANKDIQQVIEIVEDFGKYRVLVKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAAKNSKCARELIRILKQANQKVPSELSGMAMGGG 406
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BLAST of mRNA_P-wetherbeei_contig627.4.2 vs. uniprot
Match: A0A7S2XX29_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX29_9STRA)

HSP 1 Score: 354 bits (909), Expect = 6.520e-116
Identity = 174/239 (72.80%), Postives = 206/239 (86.19%), Query Frame = 3 
Query:  369 VLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVQQLARDFLHNFYQVTVGSTELSANKDIKQYVEVVEDYDKYRKLQGYLREHNSGGRVLIFVETKKGCDALTRSLRGDGWPARCIHGDKSQEERDWVLKDFKEGNTNMLIATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGTSVSFFGSKNSRCARELVKILSESGNSVPPEISQ---LSSGGGGGYG 1076
            VLDEADRMLDMGFEPQ+RKIVSQIRPDRQTLMWSATWPKEVQ LARDFL N+YQVTVGS ELSANKD+ Q +E +ED+ KYRKLQ +LRE     + LIFVETKKGCDALTRSLR DG+ ARCIHGDK+Q+ERDWVL++F+E    +L+ATDVAARGLDVK+I  V+NFDFP NMEDY+HRIGRCGRAGAKGT++SFF SKN++ AREL++IL+++G+ VP E++Q   +S GGG G G
Sbjct:  262 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQVTVGSLELSANKDVTQIIECLEDFGKYRKLQEHLREGGGHLKTLIFVETKKGCDALTRSLRMDGYHARCIHGDKNQDERDWVLREFREDKIELLVATDVAARGLDVKNIVRVVNFDFPGNMEDYVHRIGRCGRAGAKGTAISFFASKNAKMARELIEILNKNGSHVPQELAQFQGMSYGGGRGGG 500
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BLAST of mRNA_P-wetherbeei_contig627.4.2 vs. uniprot
Match: A0A6S9KNI1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KNI1_HETAK)

HSP 1 Score: 350 bits (899), Expect = 2.030e-114
Identity = 166/227 (73.13%), Postives = 198/227 (87.22%), Query Frame = 3 
Query:  369 VLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVQQLARDFLHNFYQVTVGSTELSANKDIKQYVEVVEDYDKYRKLQGYLREHNSGGRVLIFVETKKGCDALTRSLRGDGWPARCIHGDKSQEERDWVLKDFKEGNTNMLIATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGTSVSFFGSKNSRCARELVKILSESGNSVPPEISQL 1049
            VLDEADRMLDMGFEPQ+RKIVSQIRPDRQTLMWSATWPKEVQ LARDFL N+YQVTVGS EL AN DI+Q +E+ EDY KY KLQ   R    G + L+FVETK+GCDALTRSLR DG+ ARCIHGDK+Q+ERDWVLK+F+E +  +L+ATDVAARGLD++DI+MV+NFDFP+NMEDY+HRIGRCGRAGAKGT+VSFFGSKN++  RELV+I+ E+G++VP  + Q+
Sbjct:  257 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQVTVGSLELQANADIEQVIEICEDYGKYAKLQETFRSRG-GPKALVFVETKRGCDALTRSLRLDGFHARCIHGDKTQQERDWVLKEFRENHCKILVATDVAARGLDIRDIEMVVNFDFPSNMEDYVHRIGRCGRAGAKGTAVSFFGSKNAKLTRELVRIMREAGSAVPSSLQQM 482
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BLAST of mRNA_P-wetherbeei_contig627.4.2 vs. uniprot
Match: A0A4D9CVW6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVW6_9STRA)

HSP 1 Score: 340 bits (872), Expect = 2.450e-112
Identity = 172/236 (72.88%), Postives = 196/236 (83.05%), Query Frame = 3 
Query:  369 VLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVQQLARDFLHNFYQVTVGSTELSANKDIKQYVEVVEDYDKYRKLQGYLREHNSGGRVLIFVETKKGCDALTRSLRGDGWPARCIHGDKSQEERDWVLKDFKEGNTNMLIATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGTSVSFFGSKNSRCARELVKILSESGNSVPPEISQLSSGGGGGYG 1076
            VLDEADRMLDMGFEPQLR IVSQIRPDRQTLMWSATWPKEVQ LARDFL + YQVTVGS +L+ANKDIKQ V V ED DKY  L   L+E+N+GG+VL+FVETK+GCD L RSL+ DG+ A  IHGDKSQ++RDW L+ FKEG +N+L+ATDVAARGLDVKDIQMV NFDFPNNMEDYIHR+GR GRAGAKG ++SF   K+ R +REL KIL ESGN VP  +  +  GGGGGYG
Sbjct:  122 VLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSLARDFLKDPYQVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHGRISRELSKILEESGNQVPAALRGM--GGGGGYG 355
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BLAST of mRNA_P-wetherbeei_contig627.4.2 vs. uniprot
Match: W7U315_9STRA (Dead-box atp-dependent rna helicase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U315_9STRA)

HSP 1 Score: 341 bits (875), Expect = 5.330e-111
Identity = 172/236 (72.88%), Postives = 197/236 (83.47%), Query Frame = 3 
Query:  369 VLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVQQLARDFLHNFYQVTVGSTELSANKDIKQYVEVVEDYDKYRKLQGYLREHNSGGRVLIFVETKKGCDALTRSLRGDGWPARCIHGDKSQEERDWVLKDFKEGNTNMLIATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGTSVSFFGSKNSRCARELVKILSESGNSVPPEISQLSSGGGGGYG 1076
            VLDEADRMLDMGFEPQLR IVSQIRPDRQTLMWSATWPKEVQ LARDFL + YQVTVGS +L+ANKDIKQ V V ED DKY  L   L+E+N+GG+VL+FVETK+GCD L RSL+ DG+ A  IHGDKSQ++RDW L+ FKEG +N+L+ATDVAARGLDVKDIQMV NFDFPNNMEDYIHR+GR GRAGAKG ++SF   K++R +REL KIL ESGN VP  +  +  GGGGGYG
Sbjct:  252 VLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSLARDFLKDPYQVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHARISRELAKILEESGNQVPAALRGM--GGGGGYG 485
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BLAST of mRNA_P-wetherbeei_contig627.4.2 vs. uniprot
Match: A0A7S2BHU1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHU1_9STRA)

HSP 1 Score: 337 bits (863), Expect = 3.530e-109
Identity = 160/231 (69.26%), Postives = 195/231 (84.42%), Query Frame = 3 
Query:  369 VLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVQQLARDFLHNFYQVTVGSTELSANKDIKQYVEVVEDYDKYRKLQGYLREHNSGGRVLIFVETKKGCDALTRSLRGDGWPARCIHGDKSQEERDWVLKDFKEGNTNMLIATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGTSVSFFGSKNSRCARELVKILSESGNSVPPEISQLSSGG 1061
            VLDEADRMLDMGFEPQ+RKIVSQIRPDRQTLMWSATWPKEV+ +ARDFL NFYQVTVGS EL+ANK I Q VEVV+D DKYR+  G++REH  G RV++FVETK+G D LTRS+R +G+PA  IHGDK+Q+ERD  L+DF++G   +LIATDVAARGLDVK++QMV+NFD PNN EDY+HRIGRCGRAGA GTS+S+F  KN+R  R+LVK+L ++G  VP ++ Q++  G
Sbjct:  243 VLDEADRMLDMGFEPQMRKIVSQIRPDRQTLMWSATWPKEVEGMARDFLTNFYQVTVGSLELAANKSITQMVEVVDDNDKYRRCIGFMREHFKGERVIVFVETKRGADQLTRSIRQEGYPANAIHGDKTQDERDRTLQDFRDGRIMILIATDVAARGLDVKNVQMVVNFDMPNNAEDYVHRIGRCGRAGATGTSMSYFTRKNARMGRDLVKLLRDAGQEVPRDLEQMAMSG 473
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BLAST of mRNA_P-wetherbeei_contig627.4.2 vs. uniprot
Match: A0A7S2W2X9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2X9_9STRA)

HSP 1 Score: 332 bits (852), Expect = 1.510e-107
Identity = 158/224 (70.54%), Postives = 189/224 (84.38%), Query Frame = 3 
Query:  369 VLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVQQLARDFLHNFYQVTVGSTELSANKDIKQYVEVVEDYDKYRKLQGYLREHNSGGRVLIFVETKKGCDALTRSLRGDGWPARCIHGDKSQEERDWVLKDFKEGNTNMLIATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGTSVSFFGSKNSRCARELVKILSESGNSVPPEI 1040
            V+DEADRMLDMGFEPQ+RKIV QIRPDRQTLMWSATWPKEV+ LARDFL N+YQVTVGS EL+ANK I+Q VEVV+D+DKYR+   +LR    G RV+IFVETK+G D LTRSLR DG+PA  IHGDK+Q+ERD VL +F++G  NML+ATDVAARGLDVK++QMV+NFD PNN EDY+HRIGRCGRAGA G S+S+F  K ++  REL++IL E+G  VPPE+
Sbjct:  245 VMDEADRMLDMGFEPQIRKIVQQIRPDRQTLMWSATWPKEVEGLARDFLTNYYQVTVGSLELTANKAIRQLVEVVDDHDKYRRCSDFLRREFKGERVIIFVETKRGADQLTRSLRMDGYPASAIHGDKTQDERDRVLAEFRQGRCNMLVATDVAARGLDVKNVQMVVNFDMPNNAEDYVHRIGRCGRAGATGVSMSYFTRKAAKMGRELIRILREAGQEVPPEL 468
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BLAST of mRNA_P-wetherbeei_contig627.4.2 vs. uniprot
Match: A0A1E7FX17_9STRA (DEAD-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FX17_9STRA)

HSP 1 Score: 324 bits (830), Expect = 6.190e-105
Identity = 169/263 (64.26%), Postives = 198/263 (75.29%), Query Frame = 3 
Query:  285 TESFPKTFHLLL*TPDDGRRPKKPSKPQVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVQQLARDFLHNFYQVTVGSTELSANKDIKQYVEVVEDYDKYRKLQGYLREH-NSGGRVLIFVETKKGCDALTRSLRGDGWPARCIHGDKSQEERDWVLKDFKEGNTNMLIATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGTSVSFF-GSKNSRCARELVKILSESGNSVPPEISQLSSGGGG 1067
            TE    T   L+   D G    K     VLDEADRMLDMGFEPQLRKIVSQIRPDRQ LMWSATWPKE+Q LARD+L  +YQVTVGS +L+ NKD+ Q +EV +D DKYR L  YLRE+     RVL+FVETKKGCD LTRSLR DG+ AR +HGDKSQ+ERDW L +FK   + +L ATDVAARGLDV DI+MV+NFD PNNMEDY+HRIGR GRAG KGT+VSFF G KN R A+EL+ IL  +  ++PPE++ L+S  GG
Sbjct:  159 TEIVIATPGRLIDHLDQGNTNLKRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQVLMWSATWPKEIQGLARDYLGEYYQVTVGSQDLTGNKDVTQIIEVCQDPDKYRSLLRYLRENLTPKDRVLVFVETKKGCDMLTRSLRMDGFQARAMHGDKSQQERDWALGEFKNCQSTLLCATDVAARGLDVDDIKMVVNFDMPNNMEDYVHRIGRTGRAGKKGTAVSFFVGEKNGRMAKELMDILKRTDQNIPPELNALASFSGG 421
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig627.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZEN1_9STRA2.570e-12779.06DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
D7FGZ5_ECTSI2.770e-12680.62DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A6H5KBB2_9PHAE2.660e-12075.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XX29_9STRA6.520e-11672.80Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6S9KNI1_HETAK2.030e-11473.13Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A4D9CVW6_9STRA2.450e-11272.88Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U315_9STRA5.330e-11172.88Dead-box atp-dependent rna helicase n=1 Tax=Nannoc... [more]
A0A7S2BHU1_9STRA3.530e-10969.26Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2W2X9_9STRA1.510e-10770.54Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A1E7FX17_9STRA6.190e-10564.26DEAD-domain-containing protein n=1 Tax=Fragilariop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig627contigP-wetherbeei_contig627:7484..9307 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FGZ5
Preferred nameDBP2
PFAMsDEAD,Helicase_C
Model size1076
Max annot lvl2759|Eukaryota
KEGG koko:K12823
KEGG Pathwayko03040,ko05202,ko05205,map03040,map05202,map05205
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000184,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008026,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010501,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034470,GO:0034622,GO:0034641,GO:0034655,GO:0034660,GO:0035639,GO:0035770,GO:0036094,GO:0036464,GO:0042254,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0043633,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045495,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0051179,GO:0060255,GO:0060293,GO:0065003,GO:0065007,GO:0070013,GO:0070035,GO:0071042,GO:0071047,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1990120,GO:1990904
Exons3
Evalue4.46e-124
EggNOG OGsCOG0513@1|root,KOG0331@2759|Eukaryota
EC3.6.4.13
Descriptionhelicase activity
Cds size687
COG categoryL
BRITEko00000,ko00001,ko01000,ko03009,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186901.5228477-CDS-P-wetherbeei_contig627:7483..76961683186901.5228477-CDS-P-wetherbeei_contig627:7483..7696Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig627 7484..7696 -
1683186901.5357285-CDS-P-wetherbeei_contig627:8174..85071683186901.5357285-CDS-P-wetherbeei_contig627:8174..8507Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig627 8175..8507 -
1683186901.5450914-CDS-P-wetherbeei_contig627:8777..89181683186901.5450914-CDS-P-wetherbeei_contig627:8777..8918Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig627 8778..8918 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186901.554663-UTR-P-wetherbeei_contig627:8918..93071683186901.554663-UTR-P-wetherbeei_contig627:8918..9307Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig627 8919..9307 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig627.4.2prot_P-wetherbeei_contig627.4.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig627 7484..8918 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig627.4.2

>prot_P-wetherbeei_contig627.4.2 ID=prot_P-wetherbeei_contig627.4.2|Name=mRNA_P-wetherbeei_contig627.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=229bp
MLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVQQLARDFLHNFYQVTV
GSTELSANKDIKQYVEVVEDYDKYRKLQGYLREHNSGGRVLIFVETKKGC
DALTRSLRGDGWPARCIHGDKSQEERDWVLKDFKEGNTNMLIATDVAARG
LDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGTSVSFFGSKNSRCAR
ELVKILSESGNSVPPEISQLSSGGGGGYG
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mRNA from alignment at P-wetherbeei_contig627:7484..9307-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig627.4.2 ID=mRNA_P-wetherbeei_contig627.4.2|Name=mRNA_P-wetherbeei_contig627.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1824bp|location=Sequence derived from alignment at P-wetherbeei_contig627:7484..9307- (Phaeothamnion wetherbeei SAG_119_79)
CTCTTTCTTTTTCCTTTTTCAACGTGCGCCCCGCGCGGTGCGGTCGGGCC
GAACTGGGGCGGGCCGTCCAGCGGCTAGACGAGCGGTTTCTCTGTGAATT
GGTTTCGATTGACGCATCGCATCGCTTTTCCGTCTGTTTCTCTTGCGGGG
GAGAAATAGGCTTGCTTGTTTACACGTGTCTCTGTCGAAAGGGCGTGTAC
TATTACATGCGGCGGCGGCGGCGGCAGCTTCTTCTTATGTGCATTATTCA
TTGTGTGCGGCCAGCAGACTCTGAATTGCGTTAAACTGAATCTTTTCCAA
AAACGTTTCATCTTCTTTTATAAACCCCTGACGACGGACGACGCCCCAAA
AAACCGAGCAAACCGCAGGTTCTAGACGAGGCCGACCGCATGCTAGACAT
GGGCTTTGAGCCGCAGCTGCGGAAGATCGTCAGCCAGATCCGCCCCGACC
GGCAGACGCTCATGTGGAGCGCCACGTGGCCCAAGGAGGTTCAGCAGCTC
GCGCGCGACTTCCTCCACAATTTCTACCAGGTGGGTGACGTAGCTGACTT
AATGACTAGCGACTTACCGTCTGACTGACGGCGTCTCTCTCGATCTATCT
GTTCAAGTGTTGAAAGCAGAAACAGTGAATTTAAATTGTCAAAGTTGCTG
CAGTGCGGTAGGCGTATGGCGACGGCTATGTCTTCTGTGCAATCTTGAAG
TGCCGTCGTCTTCTTTTTCCCTGCTGCCATTTACCTACCCCACCCAAAAA
GCCATACGCATCTTTCCAACCAACCAATAAACCAAAATCAATCCCATCAG
GTGACGGTGGGTTCGACGGAGCTGTCGGCCAACAAGGACATCAAACAGTA
CGTTGAGGTCGTGGAAGACTACGACAAGTACCGCAAGCTGCAGGGATACC
TGCGCGAACACAACAGCGGTGGCCGCGTCCTCATCTTCGTCGAGACCAAG
AAGGGGTGCGACGCCCTGACGCGGTCGCTGCGCGGCGACGGCTGGCCGGC
GCGCTGCATCCACGGCGACAAGAGTCAGGAAGAGCGCGACTGGGTGCTGA
AGGACTTCAAAGAGGGCAACACAAACATGCTCATCGCCACGGACGTCGCC
GCGCGCGGCCTCGACGTCAAGGACATCCAGATGGTAAGCGGTTTTCTTAT
TTTCTCCTTTGAGAATTCAGGGCTGATCGGTTGGTCGTGAAGCGGGATGG
GTGATGCTAGTGTTTCAGGCTGGCAGCCCTTGTTGCCGCAGCGTTCTTGG
TTGGGTTGCTGCCCCTGCCCATTTCGTGCTGTCTGTTTCATTCCATGTTC
CGCAGCTGCCGGTTGTACTTTTGCGCGTGTGTTGCGGCGTTTCTCATGGC
TGCGGCATGAGCCCTCGTTTGCAGCCTGGGATAATGACAGCTTGGTGTTG
TTTTTTGGTTGTGTGGTTTCTTTTTGTCCGGGCAGGAAAGCTCAAGTTGC
TTTTGATGGGCGCCCAAGGGAAGCTCAAAGGGTTGCTTTGTCGTGACCTG
ACATGCTTTCAGCATGCCTTGAATAATACTACAGCGCTGACGGACCTTCT
CCAACACATGGGCTTTGCTCTTTCCGTGTCGAACGAACGATTGGATGTTT
TCTCCCCCCAGGTGATCAACTTCGACTTCCCCAACAACATGGAAGACTAC
ATTCACCGCATTGGCCGCTGCGGCCGCGCCGGCGCCAAGGGCACGAGCGT
CAGCTTCTTCGGTAGCAAGAACTCAAGGTGCGCCCGCGAGCTCGTCAAGA
TCCTCTCGGAGAGCGGCAACTCCGTGCCGCCCGAGATCTCCCAGCTCAGC
TCCGGCGGCGGCGGCGGCTACGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig627:7484..9307-

>mRNA_P-wetherbeei_contig627.4.2 ID=mRNA_P-wetherbeei_contig627.4.2|Name=mRNA_P-wetherbeei_contig627.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=687bp|location=Sequence derived from alignment at P-wetherbeei_contig627:7484..9307- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTAGACATGGGCTTTGAGCCGCAGCTGCGGAAGATCGTCAGCCAGAT
CCGCCCCGACCGGCAGACGCTCATGTGGAGCGCCACGTGGCCCAAGGAGG
TTCAGCAGCTCGCGCGCGACTTCCTCCACAATTTCTACCAGGTGACGGTG
GGTTCGACGGAGCTGTCGGCCAACAAGGACATCAAACAGTACGTTGAGGT
CGTGGAAGACTACGACAAGTACCGCAAGCTGCAGGGATACCTGCGCGAAC
ACAACAGCGGTGGCCGCGTCCTCATCTTCGTCGAGACCAAGAAGGGGTGC
GACGCCCTGACGCGGTCGCTGCGCGGCGACGGCTGGCCGGCGCGCTGCAT
CCACGGCGACAAGAGTCAGGAAGAGCGCGACTGGGTGCTGAAGGACTTCA
AAGAGGGCAACACAAACATGCTCATCGCCACGGACGTCGCCGCGCGCGGC
CTCGACGTCAAGGACATCCAGATGGTGATCAACTTCGACTTCCCCAACAA
CATGGAAGACTACATTCACCGCATTGGCCGCTGCGGCCGCGCCGGCGCCA
AGGGCACGAGCGTCAGCTTCTTCGGTAGCAAGAACTCAAGGTGCGCCCGC
GAGCTCGTCAAGATCCTCTCGGAGAGCGGCAACTCCGTGCCGCCCGAGAT
CTCCCAGCTCAGCTCCGGCGGCGGCGGCGGCTACGGC
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