mRNA_P-wetherbeei_contig6246.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6246.1.1 vs. uniprot
Match: A0A835YZA2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA2_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.320e-33 Identity = 59/106 (55.66%), Postives = 80/106 (75.47%), Query Frame = 1
Query: 10 QRDMHVGMNEFEVVDTNPELGIKTNVLYFTVPEEDFAALVRRATFTNTDPYQTLDLEILDGLAQIFPYGVFDWYIKNMARTTEAWMQVYNMEDSDNKLPFFHLAVS 327
QRDM VGMNE E+++ +LG+KT V YFT+P+EDFAALVRR TF NTDP + + L+ILDG+ ++ P+GV DW++KNM RT E W + +N ++S + LPFF L S
Sbjct: 198 QRDMLVGMNELELLEDASDLGLKTKVQYFTLPDEDFAALVRRTTFINTDPNEPVSLQILDGMPRLQPFGVTDWHLKNMGRTLEGWYKAFNYKESAHTLPFFKLTAS 303
BLAST of mRNA_P-wetherbeei_contig6246.1.1 vs. uniprot
Match: A0A6H5JEK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK8_9PHAE) HSP 1 Score: 117 bits (294), Expect = 1.760e-28 Identity = 51/105 (48.57%), Postives = 76/105 (72.38%), Query Frame = 1
Query: 7 IQRDMHVGMNEFEVVDTNPELGIKTNVLYFTVPEEDFAALVRRATFTNTDPYQTLDLEILDGLAQIFPYGVFDWYIKNMARTTEAWMQVYNMEDSDNKLPFFHLA 321
++R+MH+GMNE E+ + N +L + +V Y+ VP EDF A++RR T TNT +TL++E LDG+A++ PYG+ D K MART EAWM+V+N++ + K PFF L+
Sbjct: 192 MRRNMHIGMNELEIREENDDLDLDASVQYYEVPNEDFGAIIRRTTLTNTHDSETLEIEALDGMARVLPYGLQDLPYKVMARTFEAWMEVHNVDGEEKKAPFFRLS 296
BLAST of mRNA_P-wetherbeei_contig6246.1.1 vs. uniprot
Match: A0A7R9U8F5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8F5_9STRA) HSP 1 Score: 115 bits (287), Expect = 7.330e-28 Identity = 54/105 (51.43%), Postives = 74/105 (70.48%), Query Frame = 1
Query: 7 IQRDMHVGMNEFEVVDTNPELGIKTNVLYFTVPEEDFAALVRRATFTNTDPYQTLDLEILDGLAQIFPYGVFDWYIKNMARTTEAWMQVYNMEDSDNKLPFFHLA 321
+QRDM +G NE E+V+T+ IKT++LY++VP EDF LVR T TNT Y+ +DL ILDGLA++ PYG+ + M RT EAWM VYN+E + LP+FH++
Sbjct: 24 VQRDMLIGRNEMEIVETDANSMIKTSILYYSVPNEDFPGLVRTTTITNTADYE-VDLSILDGLAKLVPYGISYGELNAMGRTMEAWMNVYNVEVGNTDLPYFHVS 127
BLAST of mRNA_P-wetherbeei_contig6246.1.1 vs. uniprot
Match: A0A812M1S0_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812M1S0_SYMPI) HSP 1 Score: 112 bits (279), Expect = 1.850e-26 Identity = 51/104 (49.04%), Postives = 72/104 (69.23%), Query Frame = 1
Query: 10 QRDMHVGMNEFEVVDTNPELGIKTNVLYFTVPEEDFAALVRRATFTNTDPYQTLDLEILDGLAQIFPYGVFDWYIKNMARTTEAWMQVYNMEDSDNKLPFFHLA 321
+RDM +GMNE E+ + N ++G+KT +LYFTVP E+F A+VR+ TFTN LD+++LDGL ++ P G+ + M RT EAW VYN ED D + PFFH++
Sbjct: 108 ERDMLIGMNEMEIREVNHDVGLKTEILYFTVPNEEFPAMVRKVTFTNLGD-TNLDIDVLDGLMKLEPTGIPHENLVTMGRTMEAWKNVYNTEDGDMRRPFFHIS 210
BLAST of mRNA_P-wetherbeei_contig6246.1.1 vs. uniprot
Match: A0A812V3R9_9DINO (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812V3R9_9DINO) HSP 1 Score: 108 bits (271), Expect = 2.230e-25 Identity = 51/104 (49.04%), Postives = 70/104 (67.31%), Query Frame = 1
Query: 10 QRDMHVGMNEFEVVDTNPELGIKTNVLYFTVPEEDFAALVRRATFTNTDPYQTLDLEILDGLAQIFPYGVFDWYIKNMARTTEAWMQVYNMEDSDNKLPFFHLA 321
+RDM +GMNE E+ + N ++G+ T VLYFTVP E+F ALVR+ TFTN L++ +LDGL ++ P G+ + M RT EAW VYN ED D + PFFH++
Sbjct: 111 ERDMLIGMNEMEIREINKDVGLATEVLYFTVPNEEFPALVRKVTFTNLGD-TNLEISLLDGLMKLEPTGIPHENLVTMGRTMEAWKNVYNTEDGDTRRPFFHIS 213
BLAST of mRNA_P-wetherbeei_contig6246.1.1 vs. uniprot
Match: A0A813IL29_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IL29_POLGL) HSP 1 Score: 108 bits (270), Expect = 3.040e-25 Identity = 52/104 (50.00%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 10 QRDMHVGMNEFEVVDTNPELGIKTNVLYFTVPEEDFAALVRRATFTNTDPYQTLDLEILDGLAQIFPYGVFDWYIKNMARTTEAWMQVYNMEDSDNKLPFFHLA 321
QRDM VGMNE E+ +TN E+G+KT VLYFTV EDF LVRR TF N + + +++LDGL ++ P G+ + + + RT EAW V+NM+ SD PFFH++
Sbjct: 106 QRDMFVGMNELEIHETNSEIGLKTEVLYFTVSNEDFPGLVRRTTFRNLNK-TAMKVDVLDGLMKLEPSGIPNSSLMKIGRTMEAWKNVFNMDASDQCCPFFHVS 208
BLAST of mRNA_P-wetherbeei_contig6246.1.1 vs. uniprot
Match: A0A1Q9CYV1_SYMMI (Uncharacterized protein n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CYV1_SYMMI) HSP 1 Score: 108 bits (270), Expect = 3.040e-25 Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = 1
Query: 13 RDMHVGMNEFEVVDTNPELGIKTNVLYFTVPEEDFAALVRRATFTNTDPYQTLDLEILDGLAQIFPYGVFDWYIKNMARTTEAWMQVYNMEDSDNKLPFFHLA 321
RDM +GMNE E+ + N ++G+KT VLYFTVP E+F ALVR+ +FTN TL + +LDGL ++ P G+ + M RT EAW VYN ED D + PFFH++
Sbjct: 155 RDMLIGMNEMEIREINNDVGLKTEVLYFTVPNEEFPALVRKVSFTNLGD-TTLHISLLDGLMKLEPTGIPHENLVTMGRTMEAWKNVYNTEDGDMRRPFFHIS 256
BLAST of mRNA_P-wetherbeei_contig6246.1.1 vs. uniprot
Match: A0A8J5XEN9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XEN9_DIALT) HSP 1 Score: 108 bits (269), Expect = 4.160e-25 Identity = 52/106 (49.06%), Postives = 74/106 (69.81%), Query Frame = 1
Query: 10 QRDMHVGMNEFEVVDTNPELGIKTNVLYFTVPEEDFAALVRRATFTNTDPYQTLDLEILDGLAQIFPYGVFDWYIKNMARTTEAWMQVYNMEDSDNKLPFFHLAVS 327
+RDM +G NE E+ + + G++TNVLYFTVP++DF+ALVRR T TN ++LE++DGLA++ P+GV +++M RT E WM VYN +D + PFFHL S
Sbjct: 189 RRDMFIGSNEMEIEEVDEATGLQTNVLYFTVPDQDFSALVRRVTLTNRAD-TPVELEVIDGLAKLEPFGVTVGALQSMGRTMEGWMHVYNYDDELTR-PFFHLVTS 292
BLAST of mRNA_P-wetherbeei_contig6246.1.1 vs. uniprot
Match: A0A7S2V718_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V718_9STRA) HSP 1 Score: 107 bits (268), Expect = 5.660e-25 Identity = 52/106 (49.06%), Postives = 77/106 (72.64%), Query Frame = 1
Query: 10 QRDMHVGMNEFEVVDTNPELGIKTNVLYFTVPEEDFAALVRRATFTNTDPYQTLDLEILDGLAQIFPYGVFDWYIKNMARTTEAWMQVYNMEDSDNKLPFFHLAVS 327
+RDM VG NE E++D++ ELG+ T+VLY+T+ EDF L+RR TFTNT + L L+++DGLA++ PYGV +K++ RT E WM+VYN+E+S +P++ L S
Sbjct: 137 ERDMLVGQNEVEIIDSSEELGLDTSVLYYTISHEDFPGLIRRTTFTNTGE-EELSLDVIDGLAKLEPYGVDYKKMKDIGRTLEGWMKVYNLEESLT-MPWYKLTSS 240
BLAST of mRNA_P-wetherbeei_contig6246.1.1 vs. uniprot
Match: UPI001AF83BFB (Cellobiose phosphorylase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=UPI001AF83BFB) HSP 1 Score: 106 bits (265), Expect = 1.430e-24 Identity = 53/106 (50.00%), Postives = 74/106 (69.81%), Query Frame = 1
Query: 10 QRDMHVGMNEFEVVDTNPELGIKTNVLYFTVPEEDFAALVRRATFTNTDPYQTLDLEILDGLAQIFPYGVFDWYIKNMARTTEAWMQVYNMEDSDNKLPFFHLAVS 327
QRDMH+GMNE EV++ NP G++T+VLYF + E FAAL R+ T N Q L +E+LDGL + PYGV + +K+++RT EAWM+V N+E N+ PFF L ++
Sbjct: 105 QRDMHIGMNELEVIERNPARGLETSVLYFNIVNECFAALARKLTIRNIGK-QPLQVEVLDGLPAVIPYGVNNDMLKSISRTIEAWMRVSNVE---NRSPFFTLKMT 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6246.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6246.1.1 >prot_P-wetherbeei_contig6246.1.1 ID=prot_P-wetherbeei_contig6246.1.1|Name=mRNA_P-wetherbeei_contig6246.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=103bp MHVGMNEFEVVDTNPELGIKTNVLYFTVPEEDFAALVRRATFTNTDPYQTback to top mRNA from alignment at P-wetherbeei_contig6246:2198..3170- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6246.1.1 ID=mRNA_P-wetherbeei_contig6246.1.1|Name=mRNA_P-wetherbeei_contig6246.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=973bp|location=Sequence derived from alignment at P-wetherbeei_contig6246:2198..3170- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6246:2198..3170- >mRNA_P-wetherbeei_contig6246.1.1 ID=mRNA_P-wetherbeei_contig6246.1.1|Name=mRNA_P-wetherbeei_contig6246.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=309bp|location=Sequence derived from alignment at P-wetherbeei_contig6246:2198..3170- (Phaeothamnion wetherbeei SAG_119_79)back to top |