mRNA_P-wetherbeei_contig6244.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6244.1.1
Unique NamemRNA_P-wetherbeei_contig6244.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6244.1.1 vs. uniprot
Match: X5MDT7_9HYPH (UbiE/COQ5 methyltransferase familiy protein n=1 Tax=Candidatus Phaeomarinobacter ectocarpi TaxID=1458461 RepID=X5MDT7_9HYPH)

HSP 1 Score: 300 bits (767), Expect = 2.340e-99
Identity = 140/260 (53.85%), Postives = 189/260 (72.69%), Query Frame = 1
Query:    1 MSGMLEFDERQARALEVMYQNPDVAGQRSEVLRRLELRVGEAVLDIGSGPGLLLRDLALTVGTNGKAFGLDMSAPMIDVAKRRCEGLGQVAFEQGQAEKLPFPDAAFDAAVSTQVYEYVPDMALALRELYRVMKPGGRILILDTDWDSLVLHTTDRARQQRILKVWDEHLADAHLPATLSPKLRAAGFQITRREIIPLLNPEYHANCFAAGILDGIRGFVAGRSGITKEEANAWAQSLRDLGARGEFFFSINRYVFQAVK 780
            MS M++FDER A+A+E MY  PDV GQR+ V+  + LR G   LDIG GPGLLL D+   V  +G   G+DMS PM++++ RRC  +  VA E G+AE++P  + + D  VSTQVYEYV DM  AL E  RV+KPGGRI+ILDTDWDS+V ++++R R  RILKVWD HL D HLP  L   L  AG ++TRRE+IP+ NP+++ + ++ GI+ GI+GFV+GR G++++EA AWA  LR +GA G++FFS+NRY+F AVK
Sbjct:    1 MSDMIDFDERAAKAIEEMYLTPDVVGQRTHVMAAMALRPGMDALDIGVGPGLLLHDMGKAVTKDGSVTGIDMSRPMVEMSARRCADMPWVAVEHGEAEQIPMANESVDVVVSTQVYEYVSDMGAALHEAKRVLKPGGRIVILDTDWDSIVWNSSNRERMDRILKVWDAHLVDPHLPRKLPHLLHQAGLKVTRRELIPMFNPDWNPHSYSVGIMKGIQGFVSGRDGVSEDEAQAWADDLRAMGANGQYFFSLNRYLFVAVK 260          
BLAST of mRNA_P-wetherbeei_contig6244.1.1 vs. uniprot
Match: A0A845QEA8_9HYPH (Methyltransferase domain-containing protein n=1 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845QEA8_9HYPH)

HSP 1 Score: 291 bits (745), Expect = 5.120e-96
Identity = 139/260 (53.46%), Postives = 181/260 (69.62%), Query Frame = 1
Query:    1 MSGMLEFDERQARALEVMYQNPDVAGQRSEVLRRLELRVGEAVLDIGSGPGLLLRDLALTVGTNGKAFGLDMSAPMIDVAKRRCEGLGQVAFEQGQAEKLPFPDAAFDAAVSTQVYEYVPDMALALRELYRVMKPGGRILILDTDWDSLVLHTTDRARQQRILKVWDEHLADAHLPATLSPKLRAAGFQITRREIIPLLNPEYHANCFAAGILDGIRGFVAGRSGITKEEANAWAQSLRDLGARGEFFFSINRYVFQAVK 780
            MSGM+EFD   A+A+E MY  PDV GQR+ V+  + LR G A LDIG GPGLL  D+   V   G   G+DMS  M+ +A  RC  +  V  E G+AE+LP    + D  VSTQVYEYV DM  AL E  RV+KPGGR+++LDTDWDS+V H+++R R +R+LKVWD+HLAD HLP  L   L  AG  +TRRE+IPL NP+++ + ++AGI+ GI  FV+GR GI+++EA AWA  L+ LG  G +FFS+NRY+F AVK
Sbjct:    1 MSGMIEFDAAAAKAVEAMYLTPDVVGQRTHVMAAMGLRPGMAALDIGVGPGLLAHDMGKAVTAAGSVTGVDMSRAMVAMAAERCADMDWVTIEHGEAEQLPVASGSMDVVVSTQVYEYVTDMGAALHEAKRVLKPGGRLVVLDTDWDSIVWHSSNRERMERVLKVWDQHLADPHLPRKLPALLHDAGLVVTRRELIPLFNPDWNPHSYSAGIMMGILNFVSGRDGISEDEARAWADDLQALGREGHYFFSLNRYLFVAVK 260          
BLAST of mRNA_P-wetherbeei_contig6244.1.1 vs. uniprot
Match: A0A1F7TDX3_9BACT (Methyltransferase type 11 n=2 Tax=unclassified Candidatus Tectomicrobia TaxID=1802341 RepID=A0A1F7TDX3_9BACT)

HSP 1 Score: 290 bits (741), Expect = 2.290e-95
Identity = 140/255 (54.90%), Postives = 182/255 (71.37%), Query Frame = 1
Query:   19 FDERQARALEVMYQNPDVAGQRSEVLRRLELRVGEAVLDIGSGPGLLLRDLALTVGTNGKAFGLDMSAPMIDVAKRRCEGLGQVAFEQGQAEKLPFPDAAFDAAVSTQVYEYVPDMALALRELYRVMKPGGRILILDTDWDSLVLHTTDRARQQRILKVWDEHLADAHLPATLSPKLRAAGFQITRREIIPLLNPEYHANCFAAGILDGIRGFVAGRSGITKEEANAWAQSLRDLGARGEFFFSINRYVFQAVKP 783
            FDE+ AR +E +Y  PDVAGQR+ +LR L LR GE VLD+G+GPG L R++A  VG  G   G+D+S  M+++A+ R EGL   + ++G A +LPF +  FDAA + QVYEYV ++  AL EL+R ++PGGR  ILDTDW SLV    D  R +RIL+ WDEHLAD  LP  LS KLR AGF+I RRE +P+LNPEY  + ++AG++  I  FV GR G+TKEEA AWA+ LR LG +GE+FFS+NRY+F A KP
Sbjct:    7 FDEKAARRVEAVYTTPDVAGQRALILRALSLRPGERVLDVGAGPGFLAREMAEAVGPTGAVKGVDLSPAMLELARGRLEGLPHASLQEGDALRLPFGEGEFDAAAAIQVYEYVREIGPALAELFRTLRPGGRAAILDTDWGSLVWRAEDGGRARRILEAWDEHLADPRLPRILSSKLRGAGFEILRREAVPILNPEYDPDTYSAGMVSLIVPFVIGRRGVTKEEAKAWAEDLRRLGEKGEYFFSLNRYLFLARKP 261          
BLAST of mRNA_P-wetherbeei_contig6244.1.1 vs. uniprot
Match: A0A081BCV2_9HYPH (Conserved protein n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BCV2_9HYPH)

HSP 1 Score: 287 bits (735), Expect = 1.930e-94
Identity = 142/264 (53.79%), Postives = 182/264 (68.94%), Query Frame = 1
Query:    1 MSGMLEFDERQARALEVMYQNPDVAGQRSEVLRRLELRVGEAVLDIGSGPGLLLRDLALTVGTNGKAFGLDMSAPMIDVAKRRCEGLGQVAFEQGQAEKLPFPDAAFDAAVSTQVYEYVPDMALALRELYRVMKPGGRILILDTDWDSLVLHTTDRARQQRILKVWDEHLADAHLPATLSPKLRAAGFQITRREIIPLLNPEYHANCFAAGILDGIRGFVAG---RSGITKEEANAWAQSLRDLGARGEFFFSINRYVFQAVKP 783
            MS  ++FDER A+A+E MY  PDV  QR+EV++ L  + GE +LDIG+GPGLL  DLA   G NG+  G+D S PM+ +A+ RC  L Q  FE G A KL   + AFDAAVSTQVYEYV DM  AL+ L+RV++PGGR LILDTDWDS+V H +DR   QR+L  WD+HLAD HLPATL+ KLR AGF + R +++P+ +  Y  + +AAG++ GI GFV     R G++ +E   W      L  RGEFFFS+NRY+F AVKP
Sbjct:    1 MSNTIDFDERTAKAVEAMYLTPDVVAQRAEVIKALAPKPGEHLLDIGAGPGLLAYDLARLAGENGRVLGIDTSEPMVKMARTRCAALPQAEFEVGDAVKLAGVEGAFDAAVSTQVYEYVADMDGALKALHRVLRPGGRALILDTDWDSIVWHASDRRLMQRVLHCWDDHLADPHLPATLAVKLRRAGFTLMRMDVVPMTSLGYQPHSYAAGMMHGILGFVRANGERHGLSADEIQTWYDDQLHLAERGEFFFSLNRYMFLAVKP 264          
BLAST of mRNA_P-wetherbeei_contig6244.1.1 vs. uniprot
Match: A0A7V3UKB2_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3UKB2_9BACT)

HSP 1 Score: 286 bits (731), Expect = 8.340e-94
Identity = 141/257 (54.86%), Postives = 173/257 (67.32%), Query Frame = 1
Query:   13 LEFDERQARALEVMYQNPDVAGQRSEVLRRLELRVGEAVLDIGSGPGLLLRDLALTVGTNGKAFGLDMSAPMIDVAKRRCEGLGQVAFEQGQAEKLPFPDAAFDAAVSTQVYEYVPDMALALRELYRVMKPGGRILILDTDWDSLVLHTTDRARQQRILKVWDEHLADAHLPATLSPKLRAAGFQITRREIIPLLNPEYHANCFAAGILDGIRGFVAGRSGITKEEANAWAQSLRDLGARGEFFFSINRYVFQAVKP 783
            L+FDE  +R +E  Y+ PDV  QR  VL+ L L  GE VLDIGSGPG L  ++   VG  G+ +G+D+S  MI +A+ RC     V F+ G A +LPFPD  FD AVSTQVYEYV DMA AL ELYRV++PGGR LILDTDWDS+V HT DR    +IL  W EH AD +LP TL  +LR  GFQ+  + IIPL NP Y  N ++  ++  IR FV GR GIT+E+A AWA+ LR LG  G +FFS+NRY F  VKP
Sbjct:    5 LQFDEEGSRRVEATYRTPDVIAQRRVVLKVLGLCPGERVLDIGSGPGFLASEMGEAVGPAGRVYGIDLSESMIKIARERCADRPWVEFQPGDARRLPFPDHHFDVAVSTQVYEYVNDMAAALSELYRVLRPGGRALILDTDWDSIVWHTADRTLMDQILAAWSEHCADPYLPRTLGLRLRRGGFQLRHQGIIPLFNPRYDPNTYSYELIKVIRKFVPGRRGITEEKAEAWAEDLRKLGEEGAYFFSLNRYFFLVVKP 261          
BLAST of mRNA_P-wetherbeei_contig6244.1.1 vs. uniprot
Match: A0A440I2E8_9HYPH (Methyltransferase domain-containing protein n=2 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A440I2E8_9HYPH)

HSP 1 Score: 285 bits (730), Expect = 1.070e-93
Identity = 137/262 (52.29%), Postives = 184/262 (70.23%), Query Frame = 1
Query:    1 MSGMLEFDERQARALEVMYQNPDVAGQRSEVLRRLELRVGEAVLDIGSGPGLLLRDLALTVGTNGKAFGLDMSAPMIDVAKRRCEGLGQVAFEQGQAEKLPFPDAAFDAAVSTQVYEYVPDMALALRELYRVMKPGGRILILDTDWDSLVLHTTDRARQQRILKVWDEHLADAHLPATLSPKLRAAGFQITRREIIPLLNPEYHANCFAAGILDGIRGFVAGRSGITKEEANAWAQSLRDLGARGEFFFSINRYVFQAVKPA 786
            MSG LEFD   +R +E +Y  PDV  QR +VL+ L+LR GE V+D+GSGPGLL  D+A +VG +G+  G+D+S  M+ +A++RC       F++  A KLP+ D  FDAAVSTQVYEYV D+   L ELYRV +PGGR++ILDTD+DSLV++T D+ R +R+L  WDEH     LP TLS +LR AGF I +R++IP+ NPEYH N +A  +L  +  FV GR G+++EEAN W     +LG +G+FFFS+NRY+F A K A
Sbjct:    1 MSGGLEFDRETSRKVEALYLTPDVVEQRCQVLKALQLREGERVVDVGSGPGLLAYDIAASVGHDGRVCGIDISEDMLAMARKRCSNRPWTEFQRADATKLPYSDDDFDAAVSTQVYEYVADIPAGLAELYRVTRPGGRVVILDTDYDSLVIYTGDQPRMERVLSAWDEHFVHGGLPRTLSGQLRDAGFTIRQRDVIPMFNPEYHDNTYARRMLAIMASFVVGRRGVSQEEANDWLAEFSELGKQGKFFFSLNRYLFVADKVA 262          
BLAST of mRNA_P-wetherbeei_contig6244.1.1 vs. uniprot
Match: A0A7C7YIJ6_9DELT (Methyltransferase domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C7YIJ6_9DELT)

HSP 1 Score: 285 bits (728), Expect = 3.430e-93
Identity = 140/260 (53.85%), Postives = 175/260 (67.31%), Query Frame = 1
Query:    1 MSGMLEFDERQARALEVMYQNPDVAGQRSEVLRRLELRVGEAVLDIGSGPGLLLRDLALTVGTNGKAFGLDMSAPMIDVAKRRCEGLGQVAFEQGQAEKLPFPDAAFDAAVSTQVYEYVPDMALALRELYRVMKPGGRILILDTDWDSLVLHTTDRARQQRILKVWDEHLADAHLPATLSPKLRAAGFQITRREIIPLLNPEYHANCFAAGILDGIRGFVAGRSGITKEEANAWAQSLRDLGARGEFFFSINRYVFQAVK 780
            M+  ++F+E  AR LE  YQ PDV GQRS   + L LR G+ VLDIG GPGLL R+L  TVG NGK  G+D S  M+ + ++RC  L    F    A +LP+PDA+FDA VSTQVYEYV DM  AL E  RV+ PGGRI ILDTDWDS V  T    R ++++  WD+HL DAHLP TL+P L AAGF +  RE+IPL+NP +  NC++ GI   IRGFVAGR G+ ++EA AW +  R L   G +FFS+NRYVF  +K
Sbjct:   18 MADGIDFNEETARMLERTYQTPDVLGQRSRFHQLLGLRPGDRVLDIGVGPGLLARELGETVGENGKLSGIDQSEAMLAMTRKRCADLEHADFTMADACELPYPDASFDAVVSTQVYEYVADMPRALAEAARVLVPGGRIQILDTDWDSAVWSTRHPERMRKVMDAWDDHLHDAHLPTTLAPLLEAAGFSVYLREVIPLVNPTFQKNCYSYGISAAIRGFVAGRRGVDEDEARAWREEFRSLDQAGAYFFSLNRYVFAGIK 277          
BLAST of mRNA_P-wetherbeei_contig6244.1.1 vs. uniprot
Match: A0A3R7QNE2_9PROT (Methyltransferase domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A3R7QNE2_9PROT)

HSP 1 Score: 283 bits (724), Expect = 7.370e-93
Identity = 132/256 (51.56%), Postives = 180/256 (70.31%), Query Frame = 1
Query:   13 LEFDERQARALEVMYQNPDVAGQRSEVLRRLELRVGEAVLDIGSGPGLLLRDLALTVGTNGKAFGLDMSAPMIDVAKRRCEGLGQVAFEQGQAEKLPFPDAAFDAAVSTQVYEYVPDMALALRELYRVMKPGGRILILDTDWDSLVLHTTDRARQQRILKVWDEHLADAHLPATLSPKLRAAGFQITRREIIPLLNPEYHANCFAAGILDGIRGFVAGRSGITKEEANAWAQSLRDLGARGEFFFSINRYVFQAVK 780
            L+FD+  A A+E MYQ PDV GQR+   + L LR GE+VLD+G GPGLL R++A  VG  G+  G+D SA M+ ++++RC+GL Q  F +  A +LP+PD  FDA VSTQVYEYVPD+  AL E  RV++ GGRI ILDT WDS+V +T D +R  R++  WDEHL D +LP TL  +LR AGF ++  E+IP++N  +H+NC++ GI   IR FV GR GI +EEA+AW    ++   RG++FFS+NRY+F  +K
Sbjct:    3 LQFDDEAALAMERMYQTPDVVGQRARFHQALALRHGESVLDVGVGPGLLAREMADCVGETGRVAGIDQSADMLAMSEKRCDGLAQTDFSKADASELPYPDENFDAVVSTQVYEYVPDIDKALSEAARVLRRGGRIQILDTAWDSVVWNTADPSRMHRVMTAWDEHLHDPNLPTTLGSRLREAGFSVSHCEVIPIINASFHSNCYSHGISAAIRNFVNGRQGINQEEASAWRNEFKEQEERGQYFFSLNRYLFAGIK 258          
BLAST of mRNA_P-wetherbeei_contig6244.1.1 vs. uniprot
Match: A0A2P9AEX8_9HYPH (Methyltransferase type 11 n=3 Tax=Mesorhizobium TaxID=68287 RepID=A0A2P9AEX8_9HYPH)

HSP 1 Score: 282 bits (721), Expect = 2.480e-92
Identity = 136/262 (51.91%), Postives = 181/262 (69.08%), Query Frame = 1
Query:    1 MSGMLEFDERQARALEVMYQNPDVAGQRSEVLRRLELRVGEAVLDIGSGPGLLLRDLALTVGTNGKAFGLDMSAPMIDVAKRRCEGLGQVAFEQGQAEKLPFPDAAFDAAVSTQVYEYVPDMALALRELYRVMKPGGRILILDTDWDSLVLHTTDRARQQRILKVWDEHLADAHLPATLSPKLRAAGFQITRREIIPLLNPEYHANCFAAGILDGIRGFVAGRSGITKEEANAWAQSLRDLGARGEFFFSINRYVFQAVKPA 786
            MSG L+FDE  +R +E +Y  PDV  QR +VL+ L+LR GE VLDIGSGPGLL  D+A +VG +G+  G+D+S  M+ ++++RC  L    +++  A  LP+PD++FDAAVSTQVYEYV D+  AL EL RV  PGGR+++LDTD+ SLV+HT D AR  R+L  W+EH   A LP  LS  LR AGF I +R +IP+ NPEYH N +    L  +  F  GR G+++EEANAW     +LG +G+FFFS+NRY+F A K A
Sbjct:    1 MSGGLQFDEETSRKVEALYLTPDVVAQRCQVLKALQLREGERVLDIGSGPGLLAYDMAASVGRDGRVCGIDISEDMLAMSRKRCADLPWTEYQRANATNLPYPDSSFDAAVSTQVYEYVADIPAALAELCRVTCPGGRVVVLDTDYRSLVIHTEDEARMGRVLSAWEEHFVHAGLPRILSGHLRDAGFTIRQRNVIPMFNPEYHDNTYGKRALGIMASFAVGRRGVSQEEANAWLAEFAELGKQGKFFFSLNRYLFVADKVA 262          
BLAST of mRNA_P-wetherbeei_contig6244.1.1 vs. uniprot
Match: A0A434WIU8_9HYPH (Methyltransferase domain-containing protein n=2 Tax=Mesorhizobium sp. M1E.F.Ca.ET.063.01.1.1 TaxID=2496750 RepID=A0A434WIU8_9HYPH)

HSP 1 Score: 281 bits (720), Expect = 3.080e-92
Identity = 133/258 (51.55%), Postives = 185/258 (71.71%), Query Frame = 1
Query:   13 LEFDERQARALEVMYQNPDVAGQRSEVLRRLELRVGEAVLDIGSGPGLLLRDLALTVGTNGKAFGLDMSAPMIDVAKRRCEGLGQVAFEQGQAEKLPFPDAAFDAAVSTQVYEYVPDMALALRELYRVMKPGGRILILDTDWDSLVLHTTDRARQQRILKVWDEHLADAHLPATLSPKLRAAGFQITRREIIPLLNPEYHANCFAAGILDGIRGFVAGRSGITKEEANAWAQSLRDLGARGEFFFSINRYVFQAVKPA 786
            +EFDE  +R +E +Y  PDV  QR  VL+ L+LR GE VLD+GSGPGLL  D+A +VG  G+  G+D+S  M+ +++RRC       F++  A KLP PD AFDAAVSTQVYEYV D++ AL EL+RV +PGGR++++DTD+DSLV++T+D+AR +R+L  W +H     LP TL+ +LR AGF I +R+++P+ NPEYH N +A  +L  +  FV GR G+++EEANAW     +LG +G+FFFS+NRY+F A K A
Sbjct:    1 MEFDEDTSRKVEALYLTPDVVEQRCLVLKALQLREGERVLDVGSGPGLLAYDMAASVGPVGRVCGIDISEDMLAMSRRRCANQPWTEFQRADATKLPHPDDAFDAAVSTQVYEYVADISTALAELHRVTRPGGRVVVVDTDYDSLVVYTSDQARMERVLSAWGDHFVHGGLPRTLTGQLRDAGFTIRQRDVVPMFNPEYHDNTYARRMLAIVASFVVGRRGVSQEEANAWLAEFSELGEQGKFFFSLNRYLFVADKIA 258          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6244.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
X5MDT7_9HYPH2.340e-9953.85UbiE/COQ5 methyltransferase familiy protein n=1 Ta... [more]
A0A845QEA8_9HYPH5.120e-9653.46Methyltransferase domain-containing protein n=1 Ta... [more]
A0A1F7TDX3_9BACT2.290e-9554.90Methyltransferase type 11 n=2 Tax=unclassified Can... [more]
A0A081BCV2_9HYPH1.930e-9453.79Conserved protein n=1 Tax=Tepidicaulis marinus Tax... [more]
A0A7V3UKB2_9BACT8.340e-9454.86Class I SAM-dependent methyltransferase n=1 Tax=ba... [more]
A0A440I2E8_9HYPH1.070e-9352.29Methyltransferase domain-containing protein n=2 Ta... [more]
A0A7C7YIJ6_9DELT3.430e-9353.85Methyltransferase domain-containing protein n=1 Ta... [more]
A0A3R7QNE2_9PROT7.370e-9351.56Methyltransferase domain-containing protein n=2 Ta... [more]
A0A2P9AEX8_9HYPH2.480e-9251.91Methyltransferase type 11 n=3 Tax=Mesorhizobium Ta... [more]
A0A434WIU8_9HYPH3.080e-9251.55Methyltransferase domain-containing protein n=2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6244contigP-wetherbeei_contig6244:940..1728 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1333998.M2A_2369
PFAMsMethyltransf_11
Model size789
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.16e-95
EggNOG OGsCOG0500@1|root,COG2226@2|Bacteria,1R6F0@1224|Proteobacteria,2VEM7@28211|Alphaproteobacteria,4BS2W@82117|unclassified Alphaproteobacteria
DescriptionubiE/COQ5 methyltransferase family
Cds size789
COG categoryQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186899.7646236-CDS-P-wetherbeei_contig6244:939..17281683186899.7646236-CDS-P-wetherbeei_contig6244:939..1728Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6244 940..1728 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6244.1.1prot_P-wetherbeei_contig6244.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6244 940..1728 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6244.1.1

>prot_P-wetherbeei_contig6244.1.1 ID=prot_P-wetherbeei_contig6244.1.1|Name=mRNA_P-wetherbeei_contig6244.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=263bp
MSGMLEFDERQARALEVMYQNPDVAGQRSEVLRRLELRVGEAVLDIGSGP
GLLLRDLALTVGTNGKAFGLDMSAPMIDVAKRRCEGLGQVAFEQGQAEKL
PFPDAAFDAAVSTQVYEYVPDMALALRELYRVMKPGGRILILDTDWDSLV
LHTTDRARQQRILKVWDEHLADAHLPATLSPKLRAAGFQITRREIIPLLN
PEYHANCFAAGILDGIRGFVAGRSGITKEEANAWAQSLRDLGARGEFFFS
INRYVFQAVKPA*
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mRNA from alignment at P-wetherbeei_contig6244:940..1728+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6244.1.1 ID=mRNA_P-wetherbeei_contig6244.1.1|Name=mRNA_P-wetherbeei_contig6244.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig6244:940..1728+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGGCATGCTTGAGTTTGACGAGCGCCAGGCGCGCGCTTTGGAAGT AATGTATCAGAACCCGGATGTGGCGGGGCAGCGCTCCGAAGTGTTACGGC GGCTGGAATTGCGCGTGGGCGAAGCCGTGCTGGATATTGGTTCGGGGCCG GGCCTGCTGCTGCGCGATCTGGCGCTGACGGTGGGGACGAATGGCAAGGC CTTCGGGCTGGATATGAGCGCGCCGATGATTGATGTCGCCAAGCGCCGCT GTGAAGGGCTGGGGCAGGTGGCGTTTGAGCAGGGGCAGGCGGAAAAGCTT CCTTTTCCCGATGCGGCCTTTGATGCCGCCGTGTCGACCCAGGTCTATGA ATATGTGCCGGATATGGCGCTGGCGCTGCGCGAGCTGTACCGGGTGATGA AGCCGGGCGGGCGCATTCTTATTCTCGATACGGATTGGGATAGTCTGGTG CTGCACACAACGGACCGGGCGCGCCAGCAACGCATTCTGAAAGTCTGGGA TGAACATCTGGCGGATGCGCATCTGCCGGCCACGCTGTCGCCCAAACTGC GCGCCGCGGGGTTTCAGATTACGCGCCGTGAAATTATTCCGCTGTTGAAC CCGGAATATCATGCCAACTGTTTTGCGGCGGGCATACTGGACGGTATTCG CGGCTTTGTCGCCGGACGCTCCGGCATCACCAAGGAAGAGGCCAACGCCT GGGCGCAAAGCCTGCGCGATCTGGGTGCGCGCGGTGAATTTTTCTTTTCC ATCAACCGCTATGTGTTTCAGGCCGTCAAGCCGGCATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6244:940..1728+

>mRNA_P-wetherbeei_contig6244.1.1 ID=mRNA_P-wetherbeei_contig6244.1.1|Name=mRNA_P-wetherbeei_contig6244.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig6244:940..1728+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGGCATGCTTGAGTTTGACGAGCGCCAGGCGCGCGCTTTGGAAGT
AATGTATCAGAACCCGGATGTGGCGGGGCAGCGCTCCGAAGTGTTACGGC
GGCTGGAATTGCGCGTGGGCGAAGCCGTGCTGGATATTGGTTCGGGGCCG
GGCCTGCTGCTGCGCGATCTGGCGCTGACGGTGGGGACGAATGGCAAGGC
CTTCGGGCTGGATATGAGCGCGCCGATGATTGATGTCGCCAAGCGCCGCT
GTGAAGGGCTGGGGCAGGTGGCGTTTGAGCAGGGGCAGGCGGAAAAGCTT
CCTTTTCCCGATGCGGCCTTTGATGCCGCCGTGTCGACCCAGGTCTATGA
ATATGTGCCGGATATGGCGCTGGCGCTGCGCGAGCTGTACCGGGTGATGA
AGCCGGGCGGGCGCATTCTTATTCTCGATACGGATTGGGATAGTCTGGTG
CTGCACACAACGGACCGGGCGCGCCAGCAACGCATTCTGAAAGTCTGGGA
TGAACATCTGGCGGATGCGCATCTGCCGGCCACGCTGTCGCCCAAACTGC
GCGCCGCGGGGTTTCAGATTACGCGCCGTGAAATTATTCCGCTGTTGAAC
CCGGAATATCATGCCAACTGTTTTGCGGCGGGCATACTGGACGGTATTCG
CGGCTTTGTCGCCGGACGCTCCGGCATCACCAAGGAAGAGGCCAACGCCT
GGGCGCAAAGCCTGCGCGATCTGGGTGCGCGCGGTGAATTTTTCTTTTCC
ATCAACCGCTATGTGTTTCAGGCCGTCAAGCCGGCATAA
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