prot_P-wetherbeei_contig6237.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig6237.1.1
Unique Name	prot_P-wetherbeei_contig6237.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	237

Homology

[Close]

BLAST of mRNA_P-wetherbeei_contig6237.1.1 vs. uniprot
Match: A0A836CBA8_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBA8_9STRA)

HSP 1 Score: 233 bits (594), Expect = 8.420e-72
Identity = 109/159 (68.55%), Postives = 128/159 (80.50%), Query Frame = 0

Query:    1 MLATSGDGTLSAYDLRKQKLWGRSDEQEDELLSVQIIKHGRKVVCGSQNGVLVVWTWGIWGDCSDRFPGHPLSVDAMLKVDESTVLTGSSDGFIRVVAVQPDRFLGLLGDHDGFPIESLRWSRD----------RAWIGSVTHDETVRFWDASVLKEED 149
            +LATSGD TLS +DLR  KL GRSD+QEDELLSVQ++K GRKV CG+QNGV+ +W+WG WGDCSDRFPGHP SVDA+LK+DE T+LTGSSDG IRVV+VQP++FLG+LGDH GFPIE L  SR           R+WI SVTHD  VRFWDASVL ++D
Sbjct:  154 LLATSGDATLSVFDLRANKLAGRSDDQEDELLSVQVLKGGRKVACGTQNGVIALWSWGTWGDCSDRFPGHPHSVDALLKIDEETLLTGSSDGLIRVVSVQPNKFLGVLGDHGGFPIERLALSRSGGGSCGAAVARSWIASVTHDSKVRFWDASVLNDDD 312

[Close]

BLAST of mRNA_P-wetherbeei_contig6237.1.1 vs. uniprot
Match: D7G1U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U5_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 2.120e-67
Identity = 100/149 (67.11%), Postives = 124/149 (83.22%), Query Frame = 0

Query:    1 MLATSGDGTLSAYDLRKQKLWGRSDEQEDELLSVQIIKHGRKVVCGSQNGVLVVWTWGIWGDCSDRFPGHPLSVDAMLKVDESTVLTGSSDGFIRVVAVQPDRFLGLLGDHDGFPIESLRWSRDRAWIGSVTHDETVRFWDASVLKEED 149
            +LATSGD TL+ +DLR+++L GR   QEDELLS+QI+K+GR+VVCG+QNGVLV W WG WGD S RF GHP SVD +L +DE TVLTGSSDG IRVV++QPD+FLGLLGDH+ FP+ES+++SRD+ WIGSV+HD  +RFW A  L EED
Sbjct:  159 LLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNGRRVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHAGYLFEED 307

[Close]

BLAST of mRNA_P-wetherbeei_contig6237.1.1 vs. uniprot
Match: A0A8K1CJS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJS9_PYTOL)

HSP 1 Score: 219 bits (559), Expect = 5.770e-67
Identity = 101/155 (65.16%), Postives = 126/155 (81.29%), Query Frame = 0

Query:    1 MLATSGDGTLSAYDLRKQKLWGRSDEQEDELLSVQIIKHGRKVVCGSQNGVLVVWTWGIWGDCSDRFPGHPLSVDAMLKVDESTVLTGSSDGFIRVVAVQPDRFLGLLGDHDGFPIESLRWSRDRAWIGSVTHDETVRFWDASVLKEEDGDEDAE 155
            ++AT GDG LSAYDLRK  L G+SDE +DELLSV +IK+GRK+VCGSQ+GVLV+++WG WGD SDRFPGHP SVDA+LKVDE TVLTGSSDG +RVV V P++ LGL+GDH+ FP+E+L+ S D+  IGSV+H   V FWD S L  +DG++D E
Sbjct:  157 LIATGGDGRLSAYDLRKNVLAGKSDELDDELLSVSVIKNGRKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPESVDAILKVDEDTVLTGSSDGIVRVVQVHPNKLLGLIGDHEDFPVENLKLSHDQKIIGSVSHTNKVHFWDVSYLFNDDGEDDGE 311

[Close]

BLAST of mRNA_P-wetherbeei_contig6237.1.1 vs. uniprot
Match: A0A662WRV0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WRV0_9STRA)

HSP 1 Score: 216 bits (550), Expect = 8.950e-67
Identity = 99/153 (64.71%), Postives = 125/153 (81.70%), Query Frame = 0

Query:    1 MLATSGDGTLSAYDLRKQKLWGRSDEQEDELLSVQIIKHGRKVVCGSQNGVLVVWTWGIWGDCSDRFPGHPLSVDAMLKVDESTVLTGSSDGFIRVVAVQPDRFLGLLGDHDGFPIESLRWSRDRAWIGSVTHDETVRFWDASVLKEEDGDED 153
            +LATSGDG LSAYDLRK  L G+SDE +DELLSV +IK+G+K+VCGSQ+GVLV+++WG WGD SDRFPGHP SV+A+LKVDE T+LTGSSDG +RVV + P++ LGL+GDH+ FP+E+L++S D+  IGSV+H   V FWD   L EED  ED
Sbjct:   56 LLATSGDGRLSAYDLRKNVLAGKSDELDDELLSVSVIKNGKKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVEAILKVDEDTILTGSSDGIVRVVQLHPNKLLGLIGDHEDFPVETLKFSHDKKIIGSVSHTNKVHFWDVGYLFEEDDGED 208

[Close]

BLAST of mRNA_P-wetherbeei_contig6237.1.1 vs. uniprot
Match: A0A6A3F0F6_9STRA (ANAPC4_WD40 domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F0F6_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.490e-65
Identity = 99/153 (64.71%), Postives = 125/153 (81.70%), Query Frame = 0

Query:    1 MLATSGDGTLSAYDLRKQKLWGRSDEQEDELLSVQIIKHGRKVVCGSQNGVLVVWTWGIWGDCSDRFPGHPLSVDAMLKVDESTVLTGSSDGFIRVVAVQPDRFLGLLGDHDGFPIESLRWSRDRAWIGSVTHDETVRFWDASVLKEEDGDED 153
            +LATSGDG LSAYDLRK  L G+SDE +DELLSV +IK+GRK+VCGSQ+GVLV+++WG WGD SDRFPGHP SV+A+LKVDE TVLTGSSDG +RVV + P++ LGL+GDH+ FP+E++++S D+  IGSV+H   V FWD   L +ED  ED
Sbjct:  157 LLATSGDGRLSAYDLRKNVLAGKSDELDDELLSVAVIKNGRKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPESVEALLKVDEDTVLTGSSDGIVRVVQLHPNKLLGLIGDHEDFPVENMKFSHDKKIIGSVSHTNKVHFWDVGYLFDEDDGED 309

[Close]

BLAST of mRNA_P-wetherbeei_contig6237.1.1 vs. uniprot
Match: A0A3M6VF45_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF45_9STRA)

HSP 1 Score: 215 bits (548), Expect = 3.240e-65
Identity = 100/155 (64.52%), Postives = 125/155 (80.65%), Query Frame = 0

Query:    1 MLATSGDGTLSAYDLRKQKLWGRSDEQEDELLSVQIIKHGRKVVCGSQNGVLVVWTWGIWGDCSDRFPGHPLSVDAMLKVDESTVLTGSSDGFIRVVAVQPDRFLGLLGDHDGFPIESLRWSRDRAWIGSVTHDETVRFWDASVLKEEDGDEDAE 155
            +LATSGDG L+AYDLRK  L G+SDE +DELLSV +IK+GRK+VCGSQNGVLV+++W  WGD SDRFPGHP SVDA+LKVDE TVLTGSSDG +RVV + P++ LGL+GDH+ FP+E+L++S D+  IGSV+H   V FWD   L EED  E+ +
Sbjct:  157 LLATSGDGRLTAYDLRKNVLAGKSDELDDELLSVAVIKNGRKIVCGSQNGVLVIFSWDTWGDMSDRFPGHPDSVDALLKVDEDTVLTGSSDGIVRVVQLHPNKLLGLIGDHEDFPVENLKFSYDKKIIGSVSHTNKVHFWDVGYLFEEDDGEEGD 311

[Close]

BLAST of mRNA_P-wetherbeei_contig6237.1.1 vs. uniprot
Match: A0A0P1A5F6_PLAHL (Transducin family protein wd-40 repeat family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5F6_PLAHL)

HSP 1 Score: 214 bits (545), Expect = 7.750e-65
Identity = 99/154 (64.29%), Postives = 125/154 (81.17%), Query Frame = 0

Query:    1 MLATSGDGTLSAYDLRKQKLWGRSDEQEDELLSVQIIKHGRKVVCGSQNGVLVVWTWGIWGDCSDRFPGHPLSVDAMLKVDESTVLTGSSDGFIRVVAVQPDRFLGLLGDHDGFPIESLRWSRDRAWIGSVTHDETVRFWDASVLKEEDGDEDA 154
            +LATSGDG LSAY+LRK  L G+SDE +DELLSV +IK+GRKVVCGSQ+GVLV+++WG WGD SDRFPGHP SV+ +LKVDE TVLTGSSDG +RVV V P++ LGL+GDH+  P+E+L++S DR  IGSV+H   V FWD   L E++ ++DA
Sbjct:  157 LLATSGDGRLSAYNLRKNALVGKSDELDDELLSVTVIKNGRKVVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVETLLKVDEDTVLTGSSDGIVRVVQVHPNKLLGLIGDHEDLPVENLKFSHDRKMIGSVSHTNKVHFWDVGFLFEDEEEDDA 310

[Close]

BLAST of mRNA_P-wetherbeei_contig6237.1.1 vs. uniprot
Match: A0A484DTI7_BRELC (ANAPC4_WD40 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTI7_BRELC)

HSP 1 Score: 214 bits (544), Expect = 9.530e-65
Identity = 96/149 (64.43%), Postives = 125/149 (83.89%), Query Frame = 0

Query:    1 MLATSGDGTLSAYDLRKQKLWGRSDEQEDELLSVQIIKHGRKVVCGSQNGVLVVWTWGIWGDCSDRFPGHPLSVDAMLKVDESTVLTGSSDGFIRVVAVQPDRFLGLLGDHDGFPIESLRWSRDRAWIGSVTHDETVRFWDASVLKEED 149
            +LATSGDG LSAYDLRK  L G+SDE +DELLS+ +IK+GRK+VCGSQ+GVLV+++WGIWGD SDRFPGHP SV+A+LKVDE T+LTGSSDG +RVV + P++ LG++GDH+ FP+E+L+++ DR  IGSV+H   V FWD + L E+D
Sbjct:  157 LLATSGDGRLSAYDLRKNALVGKSDELDDELLSIAVIKNGRKIVCGSQDGVLVIFSWGIWGDMSDRFPGHPDSVEAVLKVDEDTILTGSSDGIVRVVQLHPNKLLGVIGDHEDFPVENLKFTYDRKIIGSVSHTNKVHFWDVAYLFEDD 305

[Close]

BLAST of mRNA_P-wetherbeei_contig6237.1.1 vs. uniprot
Match: A0A662YDS4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDS4_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.420e-64
Identity = 99/155 (63.87%), Postives = 125/155 (80.65%), Query Frame = 0

Query:    1 MLATSGDGTLSAYDLRKQKLWGRSDEQEDELLSVQIIKHGRKVVCGSQNGVLVVWTWGIWGDCSDRFPGHPLSVDAMLKVDESTVLTGSSDGFIR--VVAVQPDRFLGLLGDHDGFPIESLRWSRDRAWIGSVTHDETVRFWDASVLKEEDGDED 153
            +LATSGDG LSAYDLRK  L G+SDE +DELLSV +IK+G+K+VCGSQ+GVLV+++WG WGD SDRFPGHP SV+A+LKVDE T+LTGSSDG +R  VV + P++ LGL+GDH+ FP+E+L++S D+  IGSV+H   V FWD   L EED  ED
Sbjct:   72 LLATSGDGRLSAYDLRKNVLAGKSDELDDELLSVSVIKNGKKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVEAILKVDEDTILTGSSDGIVRYEVVQLHPNKLLGLIGDHEDFPVETLKFSHDKKIIGSVSHTNKVHFWDVGYLFEEDDGED 226

[Close]

BLAST of mRNA_P-wetherbeei_contig6237.1.1 vs. uniprot
Match: A0A0W8CRV6_PHYNI (ANAPC4_WD40 domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8CRV6_PHYNI)

HSP 1 Score: 212 bits (539), Expect = 6.170e-64
Identity = 100/156 (64.10%), Postives = 129/156 (82.69%), Query Frame = 0

Query:    1 MLATSGDGTLSAYDLRKQKLWGRSDEQEDELLSVQIIKHGRKVVCGSQNGVLVVWTWGIWGDCSDRFPGHPLSVDAMLKVDESTVLTGSSDGFIRVVAVQPDRFLGLLGDHDGFPIESLRWSRDRAWIGSVTHDETVRFWDASVL-KEEDGDEDAE 155
            +LATSGDG LSAYDLRK  L G+SDE +DELLSV +IK+GRK+VCGSQ+GVLV+++WG WGD SDRFPGHP SV+A+LKVDE TVLTGSSDG +R V+  P++ LGL+GDH+ FP+E+L++S D+  IGSV+H   V FWD   L +E+DG++DA+
Sbjct:  157 LLATSGDGRLSAYDLRKNVLAGKSDELDDELLSVAVIKNGRKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVEALLKVDEDTVLTGSSDGIVRYVST-PNKLLGLIGDHEDFPVENLKFSHDKKIIGSVSHTNKVHFWDVGYLFEEDDGEDDAD 311

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig6237.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig6237.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CBA8_9STRA	8.420e-72	68.55	WD40-repeat-containing domain protein n=1 Tax=Trib...	[more]
D7G1U5_ECTSI	2.120e-67	67.11	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A8K1CJS9_PYTOL	5.770e-67	65.16	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A662WRV0_9STRA	8.950e-67	64.71	Uncharacterized protein (Fragment) n=1 Tax=Nothoph...	[more]
A0A6A3F0F6_9STRA	1.490e-65	64.71	ANAPC4_WD40 domain-containing protein n=19 Tax=Phy...	[more]
A0A3M6VF45_9STRA	3.240e-65	64.52	Uncharacterized protein n=1 Tax=Peronospora effusa...	[more]
A0A0P1A5F6_PLAHL	7.750e-65	64.29	Transducin family protein wd-40 repeat family prot...	[more]
A0A484DTI7_BRELC	9.530e-65	64.43	ANAPC4_WD40 domain-containing protein n=1 Tax=Brem...	[more]
A0A662YDS4_9STRA	1.420e-64	63.87	Uncharacterized protein n=1 Tax=Nothophytophthora ...	[more]
A0A0W8CRV6_PHYNI	6.170e-64	64.10	ANAPC4_WD40 domain-containing protein n=4 Tax=Pero...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 17..56 e-value: 5.0 score: 12.6 coord: 101..141 e-value: 0.0091 score: 25.2
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 108..141 e-value: 0.0011 score: 19.7
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..180 e-value: 2.2E-18 score: 68.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..221
None	No IPR available	PANTHER	PTHR19855:SF23	WD REPEAT-CONTAINING PROTEIN JIP5	coord: 1..226
None	No IPR available	PANTHER	PTHR19855	WD40 REPEAT PROTEIN 12, 37	coord: 1..226
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 2..143

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig6237	contig	P-wetherbeei_contig6237:1579..3501 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig6237.1.1	mRNA_P-wetherbeei_contig6237.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig6237 1579..3501 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig6237.1.1 ID=prot_P-wetherbeei_contig6237.1.1|Name=mRNA_P-wetherbeei_contig6237.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=237bp
MLATSGDGTLSAYDLRKQKLWGRSDEQEDELLSVQIIKHGRKVVCGSQNG
VLVVWTWGIWGDCSDRFPGHPLSVDAMLKVDESTVLTGSSDGFIRVVAVQ
PDRFLGLLGDHDGFPIESLRWSRDRAWIGSVTHDETVRFWDASVLKEEDG
DEDAEDDEAEGATAAGELAEGGLAAPAVDRARGCGAKSDGADADSSDSDP
GSDDGSDDDGAAADGGMDVDSDDSDSSGCVGGGAGGG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR036322	WD40_repeat_dom_sf