mRNA_P-wetherbeei_contig6233.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6233.1.1
Unique NamemRNA_P-wetherbeei_contig6233.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: D8LK44_ECTSI (ABC transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK44_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 8.270e-89
Identity = 146/253 (57.71%), Postives = 184/253 (72.73%), Query Frame = 1
Query:  256 QAATMDRMYASMTQCQPADGTLVLPHSRLASRRVLVMTFVTGQSLASLRRSGARDHKALRVRIGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRWAPLARAMLS 1014
            +A TMDRM+ S+ +       + LP SR +++RVL+M+++ G+SLA L+R G     A R RIGK LL  L+DAWG+MIF E L +ADPHPGNILIMPE   +   P+    GLLGLR P+LR+GLLDWGQTKEL    R + A+L+LA+S      +   F  LGVKL +P+D DSI KLA VMFDTR + GL+FNPFS  NVLKLN++ +YPQDLYF+LRTVLMFRGMAQSLGV+FSLA +WAP AR +L+
Sbjct:  251 EATTMDRMHESLGE---HSRRINLPTSRSSTKRVLIMSYLEGESLAQLKRGGKERFNAARKRIGKSLLHELADAWGFMIFEEGLFNADPHPGNILIMPE---EQVGPIKRGFGLLGLRTPKLRIGLLDWGQTKELGRQDREKVANLILAVSSHASPDIVRCFNGLGVKLSNPDDADSIEKLALVMFDTRTIKGLDFNPFSDNNVLKLNSVLEYPQDLYFILRTVLMFRGMAQSLGVEFSLADKWAPHARRLLA 497          
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A835Z9N8_9STRA (ABC transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N8_9STRA)

HSP 1 Score: 280 bits (717), Expect = 2.330e-87
Identity = 153/250 (61.20%), Postives = 183/250 (73.20%), Query Frame = 1
Query:  256 QAATMDRMYASMTQCQPADGTLV-LPHSRLASRRVLVMTFVTGQSLASLRRSGARDHKALRVRIGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSD-TDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRWAPLA 999
            +A  MDRM  S+ Q    +G L+ +P S +A++R+LVM+FV GQSLAS++R       +LR RIG RLL  L+DAWGYMIF E L +AD HPGNI+IMPEGR      +VL  GLLGL  P+LRVGLLDWGQ KELDVDSR RFA LV+A+SD      +  AF  LG+ LE+P+D DSI KLA VMFDT+ + GLNFNPFS  NVLKLN+++QYPQDLYFVLR  LMFRGMAQSL V+FSLA  W P A
Sbjct:  232 EARVMDRMRLSL-QNHVREGELITVPSSIMATKRLLVMSFVEGQSLASIKRGEHERFSSLRRRIGARLLQTLADAWGYMIFGEGLFNADLHPGNIVIMPEGRAWGLTGLVL--GLLGLNTPKLRVGLLDWGQVKELDVDSRTRFARLVIAISDGKGREEIVEAFKGLGIVLENPDDSDSIEKLALVMFDTKPIAGLNFNPFSEGNVLKLNSVKQYPQDLYFVLRAALMFRGMAQSLKVEFSLADIWEPHA 478          
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: H6WB89_VAULI (ABC transporter-like protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB89_VAULI)

HSP 1 Score: 260 bits (665), Expect = 4.260e-78
Identity = 139/253 (54.94%), Postives = 173/253 (68.38%), Query Frame = 1
Query:  256 QAATMDRMYASMTQCQPADGTLVLPHSRLASRRVLVMTFVTGQSLASLRRSGARDHKALRVRIGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDT-DENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRWAPLARAML 1011
            +++ M+RM  S+         + +P S  A+++VL+M+F+ GQSLAS+RRS     + LR RIG RLL  L+ AWGYMIF E L +AD HPGNI+IMPEGR     PV L LGL+GL  P L VGLLDWGQ KELD  SR RFA LV A+++   ++ V  AF  LG+K+ DPN+ DSI KLA VMFD R + G N NPFS  N++K N I+QYPQDLYFVLR  +MFRGM++SL V FSLA  WAP A   L
Sbjct:  385 ESSVMERMKLSLAN---HSNIVSVPTSINATKKVLIMSFIEGQSLASIRRSEKERFRNLRKRIGGRLLKTLAGAWGYMIFQEGLFNADLHPGNIVIMPEGRAW--GPVGLVLGLVGLNTPALSVGLLDWGQVKELDEGSRERFARLVCAIANKKSQDEVVEAFKGLGIKIADPNNSDSIEKLALVMFDARNIDGANLNPFSQDNIMKQNRIKQYPQDLYFVLRAAIMFRGMSESLKVPFSLANAWAPYATKFL 632          
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A7S4D6K6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6K6_HETAK)

HSP 1 Score: 182 bits (462), Expect = 1.250e-50
Identity = 106/265 (40.00%), Postives = 152/265 (57.36%), Query Frame = 1
Query:  253 RQAATMDRMYASMTQCQPADGTLVLPHSRLASRRVLVMTFVTGQSLASL-------RRSGARDHKALRVRIGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENA-VAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRWAPLARAMLSELG 1023
            R+A  MD + AS+ +       L +P SRL +RR+LVM FV G  L  L       RRS     +  R R G+ LL+ L+ A+G+M+F   + +ADPHPGN+L+   G                     L VGLLDWGQTKEL  ++  R AHLV ALS  +    +   F  +G+KLE+PND  S + +A  MFDTR++PG   NPF ++N L+ NA++ +P DL+F+LR++ + +G++  L VDF L++ WAP A   L+  G
Sbjct:  116 REARNMDLIGASLREA--FGQKLTVPQSRLVTRRMLVMDFVVGSPLPQLEAVFSSSRRSRGFLRRRARRRAGEALLARLAHAYGHMVFRCGVFNADPHPGNLLLRRAGPASGG----------------LAVGLLDWGQTKELGEEATARLAHLVKALSQKENKEDIVQRFYDMGMKLENPNDTTSAHAIAVTMFDTRRIPGFVTNPFDSRNALRSNAVKVFPPDLFFMLRSIQIIKGISHGLDVDFHLSRIWAPYADQYLASHG 362          
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A836CNM3_9STRA (ABC transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNM3_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.800e-49
Identity = 98/245 (40.00%), Postives = 145/245 (59.18%), Query Frame = 1
Query:  253 RQAATMDRMYASMTQCQPADGTLVLPHSRLASRRVLVMTFVTGQSLASLRRSGARDHKALRVRIGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRW 987
            ++A  +DRM+AS+    P+   +VLP + LASRRVLVMTFV G     L        +    + GK++L+ L++AWG+M+F E   +ADPHPGN+L+M +                      +++GLLDWGQ K +D   + + A L+ A    D + +A  F+ LGVK+ +P D  S+ +LA  MF++R V G+ F+PFS  N L  N +  +P +L+FVLR+V M RG+A  +GVDFS+AQ W
Sbjct:  203 KEANNIDRMHASLASAVPS---VVLPETVLASRRVLVMTFVEGLPFTKLVVPTGFSRRLFASK-GKKMLNTLAEAWGHMLFVEGCFNADPHPGNMLLMRD----------------------MKIGLLDWGQVKSVDRALQVQLARLMRAFLADDPHQIAQEFLGLGVKVSNPEDSTSLRQLALSMFESRDVKGMVFSPFSPDNALASNQVTAFPPELFFVLRSVQMLRGLAHGMGVDFSVAQAW 421          
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A7S4DCV0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCV0_HETAK)

HSP 1 Score: 171 bits (434), Expect = 5.990e-45
Identity = 104/273 (38.10%), Postives = 156/273 (57.14%), Query Frame = 1
Query:  253 RQAATMDRMYASMTQCQPADGTLVLPHSRLASRRVLVMTFVTGQSLASLRRSGAR------------DHKALRV--RIGK----RLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLN-FNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRWAPLARAMLS 1014
            R+A  MDR+  +M + +     + +P S  A  ++L+M+F+ G  L+      A             D +  RV  R+GK    R+L++L+ AWGYMIF E L + DPHPGN+L+MP GR                     R+GLLDWGQTK ++   + + A  +LA+    +  V   F ALG ++++P D  SI K+ R MFDTR++ G +  NPF+  ++LKLN + Q P+D+YFVLR + MFRG++  +GV FSLA+ WAP AR +++
Sbjct:  303 REAGAMDRICLAMQKARMRK--IAVPKSVFAKPQLLIMSFLEGVPLSRFADEHALMGDTPEGLAASLDPRRPRVSGRVGKVVAARMLNILAKAWGYMIFKEGLFNGDPHPGNLLLMP-GR---------------------RIGLLDWGQTKVIEPGLQYKIAQTILAMRGGADAEVVRWFFALGFEVQNPGDHASIVKMVRGMFDTREILGKDDLNPFAEASLLKLNPVTQIPEDIYFVLRAIQMFRGLSTKVGVRFSLAEAWAPYAREVVA 551          
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A0G4F3L2_VITBC (Protein kinase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F3L2_VITBC)

HSP 1 Score: 172 bits (437), Expect = 6.230e-45
Identity = 93/239 (38.91%), Postives = 138/239 (57.74%), Query Frame = 1
Query:  325 LPHSRLASRRVLVMTFVTGQSLASLRRSGARDHKALR-------VRIGKRLLSLLSDAWGYMIFTE-ALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRWAPLARAMLSE 1017
            +P  RLA++++L+M+F+ G  +  LR     ++ A+R        R+ +R+   ++DAWG MIF++  L HADPHPGN LIMP G                       +GLLDWGQ K LD   +RR A  VL L     + +A   + LG+ +EDP++  ++ ++A  MFDTR++PG+ FN FS    LK NA+  +PQDL+FVLR+  + RG++  L +D +L  RWAP A+  L E
Sbjct:  313 VPQPRLATKKLLIMSFLDGVQITRLREVAESNNNAVRRLSPRMQQRLLRRITMRIADAWGVMIFSQDGLHHADPHPGNFLIMPRGH----------------------LGLLDWGQVKALDQPLQRRLASFVLDLKSRQRDRIAQGLLDLGIHVEDPSNNATLERMAVSMFDTRKMPGVCFNIFSPDYTLKSNAVLGFPQDLFFVLRSCQLLRGLSTGLSIDLALCDRWAPHAKRFLRE 529          
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A1Y1HSN1_KLENI (Protein kinase superfamily protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSN1_KLENI)

HSP 1 Score: 161 bits (408), Expect = 4.750e-41
Identity = 91/237 (38.40%), Postives = 138/237 (58.23%), Query Frame = 1
Query:  340 LASRRVLVMTFVTGQSLASL----RRSGARDHKALRVRIGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGL-NFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRWAPLARAMLSELGEGEG 1035
            L +R+VLVM F+ G  +  L    ++        +  R  +R+L  L+ A+G+MI  +    ADPHPGNI++   G+                      VGLLD+GQTK L    R ++A LVLAL++ DE A+  AF ALG++ E P DV S + +A +MFDTR      + NPF+ ++ ++ N + ++P+DL+FVLRTV + RG+   +G+D+S+A+ W PLA  +L+ELGE  G
Sbjct:  372 LVTRQVLVMDFLDGVQITRLQDEMKKRRINPDGLVARRAKRRILEDLTAAYGHMILRDGFFQADPHPGNIIVCKGGK----------------------VGLLDYGQTKRLPERLRLQYARLVLALNERDELAITDAFRALGIRTEKPPDVHSFSNMAGLMFDTRMPKDRESLNPFTDESEIQKNPVTEFPKDLFFVLRTVQLLRGLTMGMGIDWSVAEAWKPLADEVLAELGEPSG 586          
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A482RSK2_9ARCH (AarF/ABC1/UbiB kinase family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSK2_9ARCH)

HSP 1 Score: 157 bits (398), Expect = 2.410e-40
Identity = 89/258 (34.50%), Postives = 137/258 (53.10%), Query Frame = 1
Query:  253 RQAATMDRMYASMTQCQPADGTLVLPHSRLASRRVLVMTFVTGQSLASLRRSGARDHKALRVR--IGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGV-DFSLAQRWAPLARAMLSE 1017
            R+A  MD M++S+   +     +V+P S   +R++LVM+F+ G +L  +            V+  IGKR+L+++S+AWG  IF   L H DPHPGNI I  + +                      +GLLDWGQ K L     R++A L++AL   D+  +  AF  L VK+  P D+ ++  +A  MFDTR       NPF  Q  +K N++   P ++YF++R V + RGM  +  + D+SLA +W   AR +L+E
Sbjct:  269 REAFNMDFMFSSLAHIKG----IVIPQSIFRTRKLLVMSFIEGDNLTKVAHKDVLHAMPTLVKRTIGKRILNVMSEAWGDQIFCLRLFHGDPHPGNICITRDSQ----------------------IGLLDWGQVKSLSSQIARQYAQLIVALHSRDQQQIVQAFFDLEVKVSKPYDLRTVEAIAVTMFDTRTHENFVMNPFDPQAAIKQNSVLSMPTEIYFIVRAVQLMRGMCSAFKLQDYSLADKWVVHARRVLAE 500          
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A7S2TJT0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TJT0_9EUKA)

HSP 1 Score: 142 bits (359), Expect = 2.040e-36
Identity = 72/194 (37.11%), Postives = 117/194 (60.31%), Query Frame = 1
Query:  412 ARDHKALRVRIGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGV-DFSLAQRWA 990
            A++ +  R+  G +++  +++ WG M+  +   HADPHPGNI+++P+    +  P V        +    ++G+LDWGQ KE+D   +R  + +  +LS  ++ A+  AF+ LG+K+E+  D+DSI  +AR MFDT+   G   N F A   L  NA++  P+D++F+LRT+ + RG+   LGV DFSLA  WA
Sbjct:   86 AQNPRTRRI-FGGKIVKRMTEIWGRMVMEDGFFHADPHPGNIMLLPKTSRFSWLPFVP-------KTTGFKLGILDWGQVKEIDESFKRNMSDVFHSLSTQNQEAIKKAFLNLGIKVENETDLDSITTIARTMFDTKAYEGDCNNIFDADCALNKNAVKTMPRDIFFILRTIQIIRGLGFRLGVEDFSLASEWA 271          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK44_ECTSI8.270e-8957.71ABC transporter-like protein n=1 Tax=Ectocarpus si... [more]
A0A835Z9N8_9STRA2.330e-8761.20ABC transporter-like protein n=1 Tax=Tribonema min... [more]
H6WB89_VAULI4.260e-7854.94ABC transporter-like protein n=1 Tax=Vaucheria lit... [more]
A0A7S4D6K6_HETAK1.250e-5040.00Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A836CNM3_9STRA1.800e-4940.00ABC transporter-like protein n=1 Tax=Tribonema min... [more]
A0A7S4DCV0_HETAK5.990e-4538.10Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A0G4F3L2_VITBC6.230e-4538.91Protein kinase domain-containing protein n=1 Tax=V... [more]
A0A1Y1HSN1_KLENI4.750e-4138.40Protein kinase superfamily protein n=1 Tax=Klebsor... [more]
A0A482RSK2_9ARCH2.410e-4034.50AarF/ABC1/UbiB kinase family protein n=1 Tax=archa... [more]
A0A7S2TJT0_9EUKA2.040e-3637.11Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6233contigP-wetherbeei_contig6233:2..1526 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LK44
PFAMsABC1
Model size1038
Max annot lvl2759|Eukaryota
KEGG koko:K01177,ko:K08869
KEGG ReactionR02112,R11262
KEGG Pathwayko00500,map00500
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.24e-89
EggNOG OGsCOG0661@1|root,KOG1235@2759|Eukaryota
EC3.2.1.2
Descriptionregulation of tocopherol cyclase activity
Cds size771
COG categoryE
CAZyGH14
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186899.0454004-UTR-P-wetherbeei_contig6233:1..2681683186899.0454004-UTR-P-wetherbeei_contig6233:1..268Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6233 2..268 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186899.0616136-CDS-P-wetherbeei_contig6233:268..4831683186899.0616136-CDS-P-wetherbeei_contig6233:268..483Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6233 269..483 +
1683186899.0737011-CDS-P-wetherbeei_contig6233:722..8881683186899.0737011-CDS-P-wetherbeei_contig6233:722..888Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6233 723..888 +
1683186899.08412-CDS-P-wetherbeei_contig6233:1136..15261683186899.08412-CDS-P-wetherbeei_contig6233:1136..1526Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6233 1137..1526 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6233.1.1prot_P-wetherbeei_contig6233.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6233 269..1526 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6233.1.1

>prot_P-wetherbeei_contig6233.1.1 ID=prot_P-wetherbeei_contig6233.1.1|Name=mRNA_P-wetherbeei_contig6233.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp
MDRMYASMTQCQPADGTLVLPHSRLASRRVLVMTFVTGQSLASLRRSGAR
DHKALRVRIGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDT
RNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTD
ENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNV
LKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRWAPLARAMLSE
LGEGEG*
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mRNA from alignment at P-wetherbeei_contig6233:2..1526+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6233.1.1 ID=mRNA_P-wetherbeei_contig6233.1.1|Name=mRNA_P-wetherbeei_contig6233.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1525bp|location=Sequence derived from alignment at P-wetherbeei_contig6233:2..1526+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGAGCGGATGAGGGCGGCGATGGCAGGAGCGAGCAGGAGTGGCGCGGG CGATGAAGGCACGATATGCTACGCTTTAATGGAATCGAATCTTCGAAAGT TATCTTGCTGGTAGCCCTACTTATCCAAGGGGAACACGAGAGGTCCGTTC AATTTTATCGTCTTTGCCTTCCCTGTTCTCAGGCCGCATTTCGGATTCAC CAAATGCTATGTCCCCGGATTTTCCCCCGATCGAAACTGTCTGCGCCGGG CAAGACAGGCGGCGACGATGGATCGTATGTACGCGAGTATGACGCAGTGC CAGCCGGCCGACGGCACCCTCGTGCTGCCCCACAGCCGCCTCGCCAGCCG GCGGGTCCTAGTGATGACCTTCGTGACGGGGCAGTCGCTGGCCTCGCTGC GGCGGTCGGGGGCGCGGGACCACAAGGCGCTGCGGGTGCGTATCGGCAAG CGGCTGCTGTCCCTGCTCTCCGACGCCTGGGGGTGAGTCAGTAACCAAGC GAGGAAGGAGAGGAGAAAGACGAACTTTTGCTCCTTCCGTCCTGTCGGAA ACGGGCGGCGACAGAATACGGCGCAAGGAGCCGCAACCGAGTCATTTTCT CTCTTCTACTTTCTGCGCTCCAACCTGCTTCCTTCGTCGTCTCCTACCAG CTACCAGCCCTGCCCTGCCTTTCCGCCGGTGCAAACACCGCCGCTGCTGC CGCCTCTGCCTCTGCCGGCAGGTATATGATTTTCACAGAAGCCCTCCTCC ACGCGGACCCACACCCGGGCAACATCCTCATCATGCCCGAGGGCCGCGGC GACACCCGCAACCCCGTCGTCTTGGCGCTCGGGCTGCTGGGGCTGCGAGC GCCGCGCCTGCGGGTCGGCCTGCTCGACTGGGGACAGGTGCACTGCGTTT GCGGTCAGCGGTGCACAATGCGCCTCTTAGGTGTACGGTAAAAGGCAGCG GTTGTTCGTCTTCAAGGCTTTGAGGCCCTTGCTGCTATGCAATACTTCGG ATAAATTGCATCTGCTGCCGACATACAACCTTTGTGCGATGAAGTCTTTC CCTCACCGTTTTCTCCCTCCCGCTCTGTTTCCCCTGTTATTTCTGGCGTT CCCCTCCGTTATGTCGGTCTCTCAAATAAAAACAGACGAAGGAGCTGGAC GTAGACTCCCGCCGGAGGTTCGCCCACCTCGTCCTCGCCCTGTCCGACAC GGACGAGAACGCCGTCGCCGCCGCCTTTGTCGCCCTCGGGGTCAAGCTGG AAGACCCCAACGACGTCGACTCCATCAACAAGCTGGCGCGCGTCATGTTC GACACGCGGCAGGTGCCGGGCTTGAACTTCAACCCGTTTTCGGCGCAGAA CGTCTTGAAGTTGAACGCAATCCGGCAGTATCCTCAGGACTTGTACTTTG TGCTGCGGACGGTGCTCATGTTCCGGGGCATGGCCCAGAGCCTCGGCGTG GACTTCTCGCTGGCGCAGCGCTGGGCGCCGCTCGCGCGGGCCATGCTCAG CGAGCTGGGGGAAGGCGAGGGATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6233:2..1526+

>mRNA_P-wetherbeei_contig6233.1.1 ID=mRNA_P-wetherbeei_contig6233.1.1|Name=mRNA_P-wetherbeei_contig6233.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig6233:2..1526+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATCGTATGTACGCGAGTATGACGCAGTGCCAGCCGGCCGACGGCAC
CCTCGTGCTGCCCCACAGCCGCCTCGCCAGCCGGCGGGTCCTAGTGATGA
CCTTCGTGACGGGGCAGTCGCTGGCCTCGCTGCGGCGGTCGGGGGCGCGG
GACCACAAGGCGCTGCGGGTGCGTATCGGCAAGCGGCTGCTGTCCCTGCT
CTCCGACGCCTGGGGGTATATGATTTTCACAGAAGCCCTCCTCCACGCGG
ACCCACACCCGGGCAACATCCTCATCATGCCCGAGGGCCGCGGCGACACC
CGCAACCCCGTCGTCTTGGCGCTCGGGCTGCTGGGGCTGCGAGCGCCGCG
CCTGCGGGTCGGCCTGCTCGACTGGGGACAGACGAAGGAGCTGGACGTAG
ACTCCCGCCGGAGGTTCGCCCACCTCGTCCTCGCCCTGTCCGACACGGAC
GAGAACGCCGTCGCCGCCGCCTTTGTCGCCCTCGGGGTCAAGCTGGAAGA
CCCCAACGACGTCGACTCCATCAACAAGCTGGCGCGCGTCATGTTCGACA
CGCGGCAGGTGCCGGGCTTGAACTTCAACCCGTTTTCGGCGCAGAACGTC
TTGAAGTTGAACGCAATCCGGCAGTATCCTCAGGACTTGTACTTTGTGCT
GCGGACGGTGCTCATGTTCCGGGGCATGGCCCAGAGCCTCGGCGTGGACT
TCTCGCTGGCGCAGCGCTGGGCGCCGCTCGCGCGGGCCATGCTCAGCGAG
CTGGGGGAAGGCGAGGGATGA
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