mRNA_P-wetherbeei_contig6224.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6224.4.1 vs. uniprot
Match: A0A3C0TTN0_9PROT (Sugar ABC transporter substrate-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TTN0_9PROT) HSP 1 Score: 315 bits (807), Expect = 2.230e-107 Identity = 159/200 (79.50%), Postives = 175/200 (87.50%), Query Frame = 1
Query: 1 GRPLAVIASLLFVAMLQACSGLKDASQVAASDTAAKPEYIIGPRDSIQIFVWRNPELTTTVTVRPDGKVTVPLIEDLQAAGKTPTVLAREIEKQLEQFVQSPVVSVIMSGFVGPYDQQIRVVGEATNPQAIPYNEKMTALDVMIAVGGLTEFAAGNRAVLVREGQGSFRVRLDDLIRDGDVSANVPVLPGDILIVPQSWF 600
GRP+A+ SLL + ACS L +A+ A T KP+YIIGP DS QIFVWRNPELTT+VTVRPDGKVTVPLIEDLQAAGKTPT LAREIEKQLEQ+VQSPVVSVIM GFVGPYDQQ+RVVGEA NPQA+PY E MTALD+MIAVGGLTEFA+GNRAVLVR+G SFR+RLDDLI+DGDVSANVPVLPGDILI+PQSWF
Sbjct: 3 GRPVAIGLSLLLAVFVAACSNLPEATGSVAP-TGEKPDYIIGPLDSFQIFVWRNPELTTSVTVRPDGKVTVPLIEDLQAAGKTPTQLAREIEKQLEQYVQSPVVSVIMGGFVGPYDQQVRVVGEAANPQAVPYKEHMTALDLMIAVGGLTEFASGNRAVLVRQGNNSFRLRLDDLIKDGDVSANVPVLPGDILIIPQSWF 201
BLAST of mRNA_P-wetherbeei_contig6224.4.1 vs. uniprot
Match: A0A1Y5TPR8_9PROT (Polysialic acid transport protein KpsD n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5TPR8_9PROT) HSP 1 Score: 254 bits (650), Expect = 2.080e-83 Identity = 126/198 (63.64%), Postives = 160/198 (80.81%), Query Frame = 1
Query: 28 LLFVAMLQACSGLKDASQVAASDTAA----KPEYIIGPRDSIQIFVWRNPELTTTVTVRPDGKVTVPLIEDLQAAGKTPTVLAREIEKQLEQFVQSPVVSVIMSGFVGPYDQQIRVVGEATNPQAIPYNEKMTALDVMIAVGGLTEFAAGNRAVLVREGQG---SFRVRLDDLIRDGDVSANVPVLPGDILIVPQSWF 600
+L AML + ++A SDT A P+Y+IGP D++Q+FVWRN +L+ +V VRPDGK++VPLIEDL AAGKTPT LAR+IE +L+QF+Q+P+ +VI++GF+GP +QQ+RVVGEA PQAIPY E+MT LDVMI VGGLTEFAAGN+A++VR G +FRVRLDDL+RDGDV+ANVPVLPGDILI+PQSWF
Sbjct: 9 ILLAAMLGFLTACTGGPELAPSDTPAVGADTPDYLIGPGDTLQVFVWRNEDLSVSVPVRPDGKISVPLIEDLVAAGKTPTQLARDIEDRLKQFIQTPIATVIVTGFLGPLNQQVRVVGEAAEPQAIPYRERMTILDVMIEVGGLTEFAAGNKAIVVRSYTGEKQNFRVRLDDLLRDGDVTANVPVLPGDILIIPQSWF 206
BLAST of mRNA_P-wetherbeei_contig6224.4.1 vs. uniprot
Match: W6K796_MAGSQ (Putative polysaccharide export protein n=1 Tax=Magnetospira sp. (strain QH-2) TaxID=1288970 RepID=W6K796_MAGSQ) HSP 1 Score: 246 bits (627), Expect = 4.530e-80 Identity = 121/186 (65.05%), Postives = 155/186 (83.33%), Query Frame = 1
Query: 52 ACSGLKDASQVAASDTAAKPEYIIGPRDSIQIFVWRNPELTTTVTVRPDGKVTVPLIEDLQAAGKTPTVLAREIEKQLEQFVQSPVVSVIMSGFVGPYDQQIRVVGEATNPQAIPYNEKMTALDVMIAVGGLTEFAAGNRAVLVR---EGQGSFRVRLDDLIRDGDVSANVPVLPGDILIVPQSWF 600
ACS DA V+ + +P Y IG D++QIFVWRNPEL+TT+ VRPDG ++VPLIEDLQAAGKT T LAR+IEK L ++VQ+P+V+VI++GFVGP++QQ+RVVGEA PQAI + E+MT LDVMI VGGLTEFA+GNRAVLVR EG+ +FR+RLDDL+++GD+SANV +LPGD++IVPQ+WF
Sbjct: 11 ACSPYDDAPDVSQT-VGEQPTYRIGATDTLQIFVWRNPELSTTIPVRPDGLISVPLIEDLQAAGKTSTQLARDIEKVLGEYVQNPIVTVIVTGFVGPFNQQVRVVGEAAEPQAISFRERMTVLDVMIEVGGLTEFASGNRAVLVRQKAEGKENFRIRLDDLLKEGDMSANVEMLPGDVIIVPQAWF 195
BLAST of mRNA_P-wetherbeei_contig6224.4.1 vs. uniprot
Match: UPI001A97C8CC (polysaccharide export protein n=1 Tax=Arenibaculum pallidiluteum TaxID=2812559 RepID=UPI001A97C8CC) HSP 1 Score: 244 bits (623), Expect = 2.740e-79 Identity = 121/202 (59.90%), Postives = 157/202 (77.72%), Query Frame = 1
Query: 4 RPLAVIASLLFVAMLQACSGLKDA--SQVAASDTAAKPEYIIGPRDSIQIFVWRNPELTTTVTVRPDGKVTVPLIEDLQAAGKTPTVLAREIEKQLEQFVQSPVVSVIMSGFVGPYDQQIRVVGEATNPQAIPYNEKMTALDVMIAVGGLTEFAAGNRAVLVREGQG-SFRVRLDDLIRDGDVSANVPVLPGDILIVPQSWF 600
R ++V SL A++ C+G K A SQV + TAA P+Y IGP D++Q+FVW+ PE + TV VRPDG+++ PLIEDL AAGKTPT LAR+IE++L+ +V P+ +V++S F GP+DQQ+RVVG+A P A+PY MT LD++I VGGLTEFAAGNRAVL R G +F VRLDDL+RDGD+SANVPVLPGD++I+PQSWF
Sbjct: 7 RLISVAGSLALAALVSGCAGNKPAAPSQVQMTSTAA-PDYRIGPLDTVQVFVWQAPEFSVTVPVRPDGRISTPLIEDLVAAGKTPTELARDIEERLKLYVTDPLATVMVSNFAGPFDQQVRVVGQAMKPAAVPYRANMTVLDLLIQVGGLTEFAAGNRAVLARAGNSQTFNVRLDDLLRDGDISANVPVLPGDVVIIPQSWF 207
BLAST of mRNA_P-wetherbeei_contig6224.4.1 vs. uniprot
Match: A0A1I4P8Z5_ECTMO (Polysaccharide export outer membrane protein n=3 Tax=Ectothiorhodospira mobilis TaxID=195064 RepID=A0A1I4P8Z5_ECTMO) HSP 1 Score: 244 bits (622), Expect = 3.640e-79 Identity = 118/172 (68.60%), Postives = 143/172 (83.14%), Query Frame = 1
Query: 94 DTAAKPEYIIGPRDSIQIFVWRNPELTTTVTVRPDGKVTVPLIEDLQAAGKTPTVLAREIEKQLEQFVQSPVVSVIMSGFVGPYDQQIRVVGEATNPQAIPYNEKMTALDVMIAVGGLTEFAAGNRAVLVREGQGS---FRVRLDDLIRDGDVSANVPVLPGDILIVPQSWF 600
D P+YIIGP D++ IFVW PEL+ +V VRPDG++T PLIED+QAA KTPT LAR++E+ L+ +V+ PVV+VI++GF GPYDQQIRVVGEATNPQAIPYNE MT LDVMIAVGG+TEFAAGNRA +VR+ G ++VRLDDLIRDGD+ AN PV PGDILI+P+SWF
Sbjct: 34 DYEEDPDYIIGPGDNLNIFVWGQPELSMSVPVRPDGRITTPLIEDVQAANKTPTELARDMEEVLQVYVRDPVVTVIVTGFRGPYDQQIRVVGEATNPQAIPYNEHMTLLDVMIAVGGMTEFAAGNRASIVRKVNGETEQYQVRLDDLIRDGDIEANAPVYPGDILIIPESWF 205
BLAST of mRNA_P-wetherbeei_contig6224.4.1 vs. uniprot
Match: A0A0S2TG63_9GAMM (Sugar ABC transporter substrate-binding protein n=1 Tax=Candidatus Tenderia electrophaga TaxID=1748243 RepID=A0A0S2TG63_9GAMM) HSP 1 Score: 244 bits (622), Expect = 4.290e-79 Identity = 120/189 (63.49%), Postives = 152/189 (80.42%), Query Frame = 1
Query: 46 LQACSG-LKDASQVAASDTAAKPEYIIGPRDSIQIFVWRNPELTTTVTVRPDGKVTVPLIEDLQAAGKTPTVLAREIEKQLEQFVQSPVVSVIMSGFVGPYDQQIRVVGEATNPQAIPYNEKMTALDVMIAVGGLTEFAAGNRAVLVREGQG---SFRVRLDDLIRDGDVSANVPVLPGDILIVPQSWF 600
L C+G +K AS + + YIIGP D++ IFVWRNPE++ +V VRPDGK+T PL+EDLQA+GKTPT LAR+IE+ L +++ P V+VI++GFVGPYDQQ+RV+GEAT+PQA+PY E MT LD+MIAVGGLTEFAAGN AVLVR G +R+R+DDLI +GD+SANVP+LPGDILIVP+SWF
Sbjct: 22 LGGCTGNVKPASSMKDIKSIPDYNYIIGPGDNVNIFVWRNPEVSMSVPVRPDGKITTPLVEDLQASGKTPTELARKIEEVLGTYIKDPSVTVIVTGFVGPYDQQVRVIGEATSPQALPYRENMTLLDLMIAVGGLTEFAAGNNAVLVRRVNGREMQYRLRIDDLIDEGDISANVPMLPGDILIVPESWF 210
BLAST of mRNA_P-wetherbeei_contig6224.4.1 vs. uniprot
Match: A0A286G5Q8_9PROT (Polysaccharide export outer membrane protein n=1 Tax=Caenispirillum bisanense TaxID=414052 RepID=A0A286G5Q8_9PROT) HSP 1 Score: 242 bits (618), Expect = 1.470e-78 Identity = 118/197 (59.90%), Postives = 155/197 (78.68%), Query Frame = 1
Query: 22 ASLLFVAMLQACSGLKDASQVAASDTAAKPEYIIGPRDSIQIFVWRNPELTTTVTVRPDGKVTVPLIEDLQAAGKTPTVLAREIEKQLEQFVQSPVVSVIMSGFVGPYDQQIRVVGEATNPQAIPYNEKMTALDVMIAVGGLTEFAAGNRAVLVRE----GQGSFRVRLDDLIRDGDVSANVPVLPGDILIVPQSWF 600
A+ V L ACS DA +V A++ +P Y+IGP DS+QIFVWRNP+L+ V VRPDG++++PL+ +L AAGKTP LA +IE L ++VQSP V+VI++GF GP+DQQ+R+VGEAT PQA+PY ++MT LD MIAVGGLT++AAGNRAVLVRE G+ +RVR+DDL+ GD+SANV +LPGDI+IVPQ+WF
Sbjct: 11 AAAAVVLALGACSSYADAPEVPAANE--RPTYVIGPGDSLQIFVWRNPDLSAAVPVRPDGRISIPLVSELVAAGKTPPELAEDIEGTLSEYVQSPSVTVIVTGFSGPFDQQVRIVGEATQPQALPYRDQMTVLDAMIAVGGLTDYAAGNRAVLVRELPEEGRKQYRVRIDDLLERGDISANVDLLPGDIIIVPQTWF 205
BLAST of mRNA_P-wetherbeei_contig6224.4.1 vs. uniprot
Match: A0A7C1WTK9_9GAMM (Sugar ABC transporter substrate-binding protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C1WTK9_9GAMM) HSP 1 Score: 242 bits (617), Expect = 2.090e-78 Identity = 119/202 (58.91%), Postives = 155/202 (76.73%), Query Frame = 1
Query: 4 RPLAVIASLLFVAMLQACSGLKDASQVAASDTAAKPEYIIGPRDSIQIFVWRNPELTTTVTVRPDGKVTVPLIEDLQAAGKTPTVLAREIEKQLEQFVQSPVVSVIMSGFVGPYDQQIRVVGEATNPQAIPYNEKMTALDVMIAVGGLTEFAAGNRAVLVREGQG---SFRVRLDDLIRDGDVSANVPVLPGDILIVPQSWF 600
R L+V A L+F+ +L + +G + P+YIIG D +Q+FVWRNPE++ +VTVRPDGK++ PL+EDL AAGKTP+ LAR+IE++L +++ P+V+++M+GFVGPY QQIRVVGEA PQ + Y + M+ LDVMIAVGGLTEFAAGN+A +VRE G F VRLDDLIRDGD+SANVPVLPGDILI+P+SW
Sbjct: 4 RLLSVWAILVFLLVLVSLTGCSQKTLSPPDVVPVSPQYIIGAGDGLQVFVWRNPEVSVSVTVRPDGKISTPLVEDLTAAGKTPSQLARDIERKLADYLKDPLVTIMMTGFVGPYSQQIRVVGEAAQPQVLAYRDHMSVLDVMIAVGGLTEFAAGNKARIVREVNGRRQQFGVRLDDLIRDGDISANVPVLPGDILIIPESWL 205
BLAST of mRNA_P-wetherbeei_contig6224.4.1 vs. uniprot
Match: A0A2E6QG81_9PROT (Sugar ABC transporter substrate-binding protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QG81_9PROT) HSP 1 Score: 242 bits (617), Expect = 2.160e-78 Identity = 115/173 (66.47%), Postives = 144/173 (83.24%), Query Frame = 1
Query: 91 SDTAAKPEYIIGPRDSIQIFVWRNPELTTTVTVRPDGKVTVPLIEDLQAAGKTPTVLAREIEKQLEQFVQSPVVSVIMSGFVGPYDQQIRVVGEATNPQAIPYNEKMTALDVMIAVGGLTEFAAGNRAVLVR---EGQGSFRVRLDDLIRDGDVSANVPVLPGDILIVPQSWF 600
S++ A P+Y IGP DS+ IFVWRNPEL+ +V VRPDGK++ PL+ED+QAA KTPT LAR++E +L +FVQ P+V++I++ FVGP+DQQ+RVVGEA P+AIPY EKMT LDVMI VGGLTEFAAGN A++VR + SF VRLDDLI+DGDV+AN VLPGD+LI+PQSWF
Sbjct: 34 SESLATPDYRIGPGDSLNIFVWRNPELSMSVPVRPDGKISTPLVEDMQAANKTPTELARDMEVELSKFVQDPIVTIIVNNFVGPFDQQVRVVGEAAQPRAIPYREKMTMLDVMIEVGGLTEFAAGNEAIVVRKFGDETKSFGVRLDDLIKDGDVTANAQVLPGDVLIIPQSWF 206
BLAST of mRNA_P-wetherbeei_contig6224.4.1 vs. uniprot
Match: UPI001912BE7E (Polysaccharide export protein n=5 Tax=Skermanella TaxID=204447 RepID=UPI001912BE7E) HSP 1 Score: 240 bits (612), Expect = 1.850e-77 Identity = 122/211 (57.82%), Postives = 156/211 (73.93%), Query Frame = 1
Query: 1 GRPLAVI----ASLLFVAMLQACSGLKD--ASQVAASDTAAKPEYIIGPRDSIQIFVWRNPELTTTVTVRPDGKVTVPLIEDLQAAGKTPTVLAREIEKQLEQFVQSPVVSVIMSGFVGPYDQQIRVVGEATNPQAIPYNEKMTALDVMIAVGGLTEFAAGNRAVLVREG-----QGSFRVRLDDLIRDGDVSANVPVLPGDILIVPQSWF 600
GRP +++ ++ L A L ACS + A P+Y IGP D+IQI+VW++PE + TV VRPDG+++ PLIEDL+A GKTPT LAR+IE +L+ +VQ P+V+VI+SGF GP+DQQ+RVVGEA P+AIPY MT LDVMI VGGLTEFA+GNRAVL R G + +F VRLDDL+RDGD+ ANVPVLPGD++I+PQSWF
Sbjct: 8 GRPTSLVTAFASAFLAAAGLAACSSADNPPAPGTVQVQQPTTPDYRIGPLDTIQIYVWQSPEFSVTVPVRPDGRISTPLIEDLEATGKTPTQLARDIEDKLKVYVQDPLVTVIVSGFAGPFDQQVRVVGEAIQPRAIPYRANMTMLDVMIEVGGLTEFASGNRAVLARGGGTSSEKATFNVRLDDLLRDGDIRANVPVLPGDVIIIPQSWF 218 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6224.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6224.4.1 >prot_P-wetherbeei_contig6224.4.1 ID=prot_P-wetherbeei_contig6224.4.1|Name=mRNA_P-wetherbeei_contig6224.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=201bp GRPLAVIASLLFVAMLQACSGLKDASQVAASDTAAKPEYIIGPRDSIQIFback to top mRNA from alignment at P-wetherbeei_contig6224:2653..3255- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6224.4.1 ID=mRNA_P-wetherbeei_contig6224.4.1|Name=mRNA_P-wetherbeei_contig6224.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig6224:2653..3255- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6224:2653..3255- >mRNA_P-wetherbeei_contig6224.4.1 ID=mRNA_P-wetherbeei_contig6224.4.1|Name=mRNA_P-wetherbeei_contig6224.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig6224:2653..3255- (Phaeothamnion wetherbeei SAG_119_79)back to top |