mRNA_P-wetherbeei_contig6209.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6209.1.1 vs. uniprot
Match: A0A835Z8A0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8A0_9STRA) HSP 1 Score: 143 bits (360), Expect = 7.540e-40 Identity = 78/168 (46.43%), Postives = 101/168 (60.12%), Query Frame = 1
Query: 16 WGVGLWLSSDDKVRRLNRQYRGKRKSTDILSFPFHEGLA------------------PGELPQTTDPEQMYLGDMVVSVAYVARQLERDRQQAANDISRGASGSGGNGIGEEEEDRGVSGAMAGEFDLQRRLELLLVHGLCHLVGYDHETDGDYEAMVVQEERVMAAM 465
W V LWL++D VR+LN QYRGK KSTDILSF ++E PG+L + PE+M LG+M+VS+AYV R +++D+ + EEE DRGVSGAM+ F +Q RL LL +HGL HLVGYDHETD DYE MV +EE ++ A+
Sbjct: 69 WDVSLWLTTDKTVRKLNSQYRGKDKSTDILSFSYNELQCSYRLLHGGSHSTKLQVETPGKLAKVRHPEEMDLGEMMVSLAYVDRVIQQDKAEQDGQSQ------------EEEHDRGVSGAMSRVFTVQERLPLLCIHGLLHLVGYDHETDEDYEVMVAREEELLRAL 224
BLAST of mRNA_P-wetherbeei_contig6209.1.1 vs. uniprot
Match: D7FZG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG5_ECTSI) HSP 1 Score: 144 bits (363), Expect = 1.360e-39 Identity = 77/156 (49.36%), Postives = 101/156 (64.74%), Query Frame = 1
Query: 1 LRAEGWGVGLWLSSDDKVRRLNRQYRGKRKSTDILSFPFHE-GLAPGELPQTTDPEQMYLGDMVVSVAYVARQLERDRQQAANDISRGASGSGGNGIGEEEEDRGVSGAMAGEFDLQRRLELLLVHGLCHLVGYDHETDGDYEAMVVQEERVMAAM 465
L + W VG L++D +V RLNRQYRG STDILSFP H+ +PG LP+ P +M LGDM +S+AYV RQ++RDR++ + +RGVSGAM+ FD+Q R +LLVHGL HL+GYDHET+ DY+AMV EE V+ A+
Sbjct: 133 LGCQAWDVGAVLTTDKEVFRLNRQYRGMSTSTDILSFPNHDMSGSPGVLPKVRFPAEMDLGDMFISLAYVDRQIKRDREEXXXXXXXXXXXXXXXXXXXXDSERGVSGAMSRVFDVQERASMLLVHGLIHLLGYDHETESDYKAMVAVEEEVLRAV 288
BLAST of mRNA_P-wetherbeei_contig6209.1.1 vs. uniprot
Match: F0XVF3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVF3_AURAN) HSP 1 Score: 138 bits (347), Expect = 3.950e-38 Identity = 72/155 (46.45%), Postives = 97/155 (62.58%), Query Frame = 1
Query: 1 LRAEGWGVGLWLSSDDKVRRLNRQYRGKRKSTDILSFPFHEGLAPGELPQTTD---PEQMYLGDMVVSVAYVARQLERDRQQAANDISRGASGSGGNGIGEEEEDRGVSGAMAGEFDLQRRLELLLVHGLCHLVGYDHETDGDYEAMVVQEERVM 456
LR + VG+WL++D +R+ N ++RG RKSTDILSFPFH+ LAPG LP D + + LGDMVVSV YV R+ E+D D + G RGV+ AMA D++ R+ +LLVHGLCHL+ YDHETD ++E MV E+ ++
Sbjct: 66 LRCSEFDVGIWLTTDATIRKYNTRFRGMRKSTDILSFPFHDELAPGALPDAVDRDDEDDLNLGDMVVSVPYVRRRAEKD---GGRDHAPG---------------RGVAAAMAPVADVEERIHMLLVHGLCHLLNYDHETDDEFEDMVALEDELL 202
BLAST of mRNA_P-wetherbeei_contig6209.1.1 vs. uniprot
Match: A0A7S2RF28_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RF28_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.390e-35 Identity = 75/149 (50.34%), Postives = 96/149 (64.43%), Query Frame = 1
Query: 22 VGLWLSSDDKVRRLNRQYRGKRKSTDILSFPFHEGL-APGELPQTTDPEQMYLGDMVVSVAYVARQLERDRQQAANDISRGASGSGGNGIGEEEEDRGVSGAMAGEFDLQRRLELLLVHGLCHLVGYDHETDGDYEAMVVQEERVMAAM 465
VGLWLSSD VR N +YRG RKSTDILSFPF++ L AP LP+ + M LGDM+VSV YVAR +RD + A +S G + GE + GVSG M F Q RL LL++HG+CHL+G+DHE D +Y M +EER++ +
Sbjct: 99 VGLWLSSDRTVRDWNTRYRGMRKSTDILSFPFYDQLRAPDPLPEMQCEDDMNLGDMIVSVPYVARACKRDHRDA---LSMGED----SWTGESVQLGGVSGEMMHYFSPQPRLALLVIHGICHLLGHDHEEDSEYALMRAEEERLIRGL 240
BLAST of mRNA_P-wetherbeei_contig6209.1.1 vs. uniprot
Match: W7UC15_9STRA (Rrna maturation factor n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UC15_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.640e-32 Identity = 73/150 (48.67%), Postives = 97/150 (64.67%), Query Frame = 1
Query: 22 VGLWLSSDDKVRRLNRQYRGKRKSTDILSFPFHEGLAPGELPQTTD----PEQMYLGDMVVSVAYVARQLERDRQQAANDISRGASGSGGNGIGEEEEDRGVSGAMAGEFDLQRRLELLLVHGLCHLVGYDHETDGDYEAMVVQEERVMA 459
V LWL++D +R N +YRGKR +TDILSFPFHE APG +P + E LGDM+VSV YV RQ +RD+ A+ + +G + G +RG SGAMA F +Q RL L++HG+ HL+G+DHETD DY MV +E+RV+A
Sbjct: 247 VSLWLTNDRSIREYNDRYRGKRTATDILSFPFHEYEAPG-IPTSESWALTGEVKDLGDMIVSVPYVQRQCQRDQ---ADWLEKGENLWSG--------ERGASGAMARVFGVQDRLPFLVIHGVLHLLGFDHETDKDYNEMVKEEDRVLA 384
BLAST of mRNA_P-wetherbeei_contig6209.1.1 vs. uniprot
Match: A0A4D9DAX9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAX9_9STRA) HSP 1 Score: 124 bits (312), Expect = 6.820e-32 Identity = 71/150 (47.33%), Postives = 92/150 (61.33%), Query Frame = 1
Query: 22 VGLWLSSDDKVRRLNRQYRGKRKSTDILSFPFHEGLAPGELPQTTD----PEQMYLGDMVVSVAYVARQLERDRQQAANDISRGASGSGGNGIGEEEEDRGVSGAMAGEFDLQRRLELLLVHGLCHLVGYDHETDGDYEAMVVQEERVMA 459
V LWL++D +R N +YRGKR +TDILSFPFHE APG +P + E LGDM+VSV YV RQ +RD+ SG +RG SGAMA F +Q RL L++HG+ HL+G+DHETD +Y MV +E+RV+A
Sbjct: 111 VSLWLTNDRSIREYNDRYRGKRTATDILSFPFHEYEAPG-VPTSESWALTGEVKDLGDMIVSVPYVQRQCQRDQVDWFEKGENLWSG-----------ERGASGAMARVFGVQDRLPFLVIHGVLHLLGFDHETDKEYNEMVKEEDRVLA 248
BLAST of mRNA_P-wetherbeei_contig6209.1.1 vs. uniprot
Match: A0A1Z5JES7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JES7_FISSO) HSP 1 Score: 117 bits (292), Expect = 1.340e-29 Identity = 65/155 (41.94%), Postives = 91/155 (58.71%), Query Frame = 1
Query: 10 EGWGVGLWLSSDDKVRRLNRQYRGKRKSTDILSFPFHEGLAPGEL--PQTTDPEQMYLGDMVVSVAYVARQLERDRQQAAN-DISRGASGSGGNGIGEEEEDRGVSGAMAGEFDLQRRLELLLVHGLCHLVGYDHETDGDYEAMVVQEERVMAAM 465
E +GV L L D++++ +N + RG TDILSFPF E + PG L PQ P+ LGD++V V YV R+ + D++ D +RGVSGAMA +D + R+ +LL+HG+ HLVGYDHE D DYE MV +EE ++A +
Sbjct: 84 ETYGVSLELIGDEEMQEINLESRGVDAPTDILSFPFSEYIEPGTLEPPQFDIPDYYQLGDLLVDVPYVMRRCQEDKEYYEQLDXXXXXXXX---------XERGVSGAMARIYDAEERIHMLLIHGMLHLVGYDHEDDEDYELMVAKEEEILAEL 229
BLAST of mRNA_P-wetherbeei_contig6209.1.1 vs. uniprot
Match: A0A7S1GRK6_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GRK6_CYCTE) HSP 1 Score: 113 bits (282), Expect = 3.080e-29 Identity = 60/139 (43.17%), Postives = 83/139 (59.71%), Query Frame = 1
Query: 46 DKVRRLNRQYRGKRKSTDILSFPFHEGLAPGEL--PQTTDPEQMYLGDMVVSVAYVARQLERDRQQAANDISRGASGSGGNGIGEEEEDRGVSGAMAGEFDLQRRLELLLVHGLCHLVGYDHETDGDYEAMVVQEERVM 456
++++ NR+ R + TDILSFP H+ L PG L P+ P+ LGDM+V V YV R+ + D + D ++DRGVSGAM EFD ++RL +LLVHG+ HLVGYDH D DYE MV +E+ ++
Sbjct: 1 EEMQETNRETRDVDQPTDILSFPMHDALEPGVLMKPEIDIPQLYNLGDMMVDVPYVIRRCKEDEEWEYED----------------DDDRGVSGAMVEEFDPEKRLHMLLVHGMLHLVGYDHIDDEDYEVMVAKEDEIL 123
BLAST of mRNA_P-wetherbeei_contig6209.1.1 vs. uniprot
Match: A0A5D6Y445_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y445_9STRA) HSP 1 Score: 114 bits (285), Expect = 3.900e-29 Identity = 60/139 (43.17%), Postives = 74/139 (53.24%), Query Frame = 1
Query: 16 WGVGLWLSSDDKVRRLNRQYRGKRKSTDILSFPFHEGLAPGELPQTTDPEQMYLGDMVVSVAYVARQLERDRQQAANDISRGASGSGGNGIGEEEEDRGVSGAMAGEFDLQRRLELLLVHGLCHLVGYDHETDGDYEAM 432
W VG+ L++D +RRLNR +R K K TDILSFPFH+ PG P+ E+ YLGDM +S AYV RQ E AA L+ R+ +LL HGLCHL+GYDHETD D+E M
Sbjct: 42 WDVGVMLTTDAHMRRLNRTHRQKDKPTDILSFPFHQVRRPGRFPRVRSREERYLGDMYISPAYVRRQCESGELDAAE-------------------------------TLETRMPVLLAHGLCHLLGYDHETDEDFERM 149
BLAST of mRNA_P-wetherbeei_contig6209.1.1 vs. uniprot
Match: A0A1Z5K9I9_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9I9_FISSO) HSP 1 Score: 115 bits (288), Expect = 5.050e-29 Identity = 65/155 (41.94%), Postives = 92/155 (59.35%), Query Frame = 1
Query: 10 EGWGVGLWLSSDDKVRRLNRQYRGKRKSTDILSFPFHEGLAPGEL--PQTTDPEQMYLGDMVVSVAYVARQLERDRQQAAN-DISRGASGSGGNGIGEEEEDRGVSGAMAGEFDLQRRLELLLVHGLCHLVGYDHETDGDYEAMVVQEERVMAAM 465
E +GV L L D++++ +N + RG +DILSFPF + + PG L PQ P+ LGD++V V YV R+ + D++ D S +RGVSGAMA +D + R+ +LLVHG+ HLVGYDHE D DYE MV +EE ++A +
Sbjct: 82 ETYGVSLELIGDEEMQAVNLESRGVDAPSDILSFPFSDYIEPGTLEPPQFDIPDYYQLGDLLVDVPYVMRRCQEDKEYYEQLDESXXXXXX---------XERGVSGAMARIYDAEERIHMLLVHGMLHLVGYDHEDDDDYELMVAKEEEILAEL 227 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6209.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6209.1.1 >prot_P-wetherbeei_contig6209.1.1 ID=prot_P-wetherbeei_contig6209.1.1|Name=mRNA_P-wetherbeei_contig6209.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp LRAEGWGVGLWLSSDDKVRRLNRQYRGKRKSTDILSFPFHEGLAPGELPQback to top mRNA from alignment at P-wetherbeei_contig6209:10..805+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6209.1.1 ID=mRNA_P-wetherbeei_contig6209.1.1|Name=mRNA_P-wetherbeei_contig6209.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=796bp|location=Sequence derived from alignment at P-wetherbeei_contig6209:10..805+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6209:10..805+ >mRNA_P-wetherbeei_contig6209.1.1 ID=mRNA_P-wetherbeei_contig6209.1.1|Name=mRNA_P-wetherbeei_contig6209.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig6209:10..805+ (Phaeothamnion wetherbeei SAG_119_79)back to top |