mRNA_P-wetherbeei_contig6206.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6206.1.3 vs. uniprot
Match: D7FUS9_ECTSI (DNA repair protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUS9_ECTSI) HSP 1 Score: 297 bits (760), Expect = 7.640e-91 Identity = 151/263 (57.41%), Postives = 186/263 (70.72%), Query Frame = 1
Query: 391 WGPNTAWHHLQCTVFQCTSPLDIDGYDDLMPDDQMAVEKRVEASQNETDERYEPIDPSTLVRAEWTEQMDTPADLTMPLLAYQREGLAWMHRQEHTEYHGGILADEMGMGKTIQTISLALSHRPDDKDQDQTAQWDAVETSMGREPDPAR---RAGTLVICPLVALLQWRSEIEKFVKEKGLTVCVHHGSKRASSAKDLQDADVVLTTYAIAEADYRKMQARTKVACPDCGRKLYPEKMILHRKYFCGESAQRTEAQAKTQRK 1170
WGP+T WHHL CTVF+ T+P +++GY DL Q +E++V SQ E D+ YEPI P LVR EWTE+ + P D+ LL YQ EGLAWM QE +Y GGILADEMGMGKT+Q I +++R + KD+ +W E MG P A R GTLV+CP +AL QW SE+ +FVK L V +HHG+KRA+ A+DL ADVVLTTYAI E ++RK A KVACPDCG+ LYP+KM +HRKYFCG+SAQRTEAQAKTQRK
Sbjct: 37 WGPSTQWHHLMCTVFKVTTPEEVEGYGDLDDAAQTLLEQKVVKSQGEVDDMYEPITPDDLVRKEWTEKANCPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMG--PGGASKESRGGTLVVCPTIALKQWHSELARFVKPGVLKVVIHHGAKRATLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRK 297
BLAST of mRNA_P-wetherbeei_contig6206.1.3 vs. uniprot
Match: A0A6H5JN56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN56_9PHAE) HSP 1 Score: 296 bits (758), Expect = 5.690e-86 Identity = 151/263 (57.41%), Postives = 186/263 (70.72%), Query Frame = 1
Query: 391 WGPNTAWHHLQCTVFQCTSPLDIDGYDDLMPDDQMAVEKRVEASQNETDERYEPIDPSTLVRAEWTEQMDTPADLTMPLLAYQREGLAWMHRQEHTEYHGGILADEMGMGKTIQTISLALSHRPDDKDQDQTAQWDAVETSMGREPDPAR---RAGTLVICPLVALLQWRSEIEKFVKEKGLTVCVHHGSKRASSAKDLQDADVVLTTYAIAEADYRKMQARTKVACPDCGRKLYPEKMILHRKYFCGESAQRTEAQAKTQRK 1170
WGP+T WHHL CTVF+ T+P +++GY DL Q +E++V SQ E D+ YEPI P LVR EWT++ P D+ LL YQ EGLAWM QE +Y GGILADEMGMGKT+Q I +++R + KD+ +W E MG P A R GTLV+CP +AL QW+SE+ +FVK L V +HHG+KRAS A+DL ADVVLTTYAI E ++RK A KVACPDCG+ LYP+KM +HRKYFCG+SAQRTEAQAKTQRK
Sbjct: 251 WGPSTQWHHLMCTVFKVTTPEEVEGYGDLDDAAQTLLEQKVVKSQGEVDDMYEPITPDDLVRKEWTDKAKCPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMG--PGGASKESRGGTLVVCPTIALKQWQSELARFVKPGILKVVIHHGAKRASLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRK 511
BLAST of mRNA_P-wetherbeei_contig6206.1.3 vs. uniprot
Match: A0A836CRA2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRA2_9STRA) HSP 1 Score: 290 bits (743), Expect = 2.080e-85 Identity = 147/263 (55.89%), Postives = 184/263 (69.96%), Query Frame = 1
Query: 403 TAWHHLQCTVFQCTSPLDIDGYDDLMPDDQMAVEKRVEASQNETDERYEPIDPSTLVRAEWTEQMDTPADLTMPLLAYQREGLAWMHRQEHTEYH-GGILADEMGMGKTIQTISLALSHRPDDKDQDQTAQWDAVETSM-----GREPDPARRAGTLVICPLVALLQWRSEIEKFVKEKGLTVCVHHGSKRASSAKDLQDADVVLTTYAIAEADYRKMQARTKVACPDCGRKLYPEKMILHRKYFCGESAQRTEAQAKTQRKK 1173
TAWHHL C V C + DI+GYDDL + Q +++RV+ S+ + DE Y+PI+P L+R W ++ P +L PLL YQ EGL W+ QE E H GGILADEMG KTIQ ISL L++RP KD+ Q + W A E M G RR GTLVICPL+AL QWR+EIE+FV++ GL+V +HG+ RA + L DADVVLTTYA+ +ADYR+M A+ KV CPDCG+ LYP+K+ LHRKYFCGE A+RT AQAKTQRKK
Sbjct: 2 TAWHHLACVVPHCNTAADIEGYDDLPEEQQQVLQERVDESRGQVDELYQPINPDDLIRKAWDKKAPQPPELLSPLLPYQLEGLGWLLHQELEEEHRGGILADEMG--KTIQAISLMLANRPHAKDKQQCSAWTAAEAGMEFPTLGNADTAPRRGGTLVICPLIALTQWRAEIERFVEDGGLSVVTYHGADRAKGTRGLADADVVLTTYAVVQADYRRMVAKRKVKCPDCGKALYPDKLFLHRKYFCGEGAERTAAQAKTQRKK 262
BLAST of mRNA_P-wetherbeei_contig6206.1.3 vs. uniprot
Match: A0A7S1XLE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLE0_9STRA) HSP 1 Score: 269 bits (688), Expect = 4.190e-82 Identity = 135/261 (51.72%), Postives = 179/261 (68.58%), Query Frame = 1
Query: 391 WGPNTAWHHLQCTVFQ-CTSPLDIDGYDDLMPDDQMAVEKRVEASQNETDERYEPIDPSTLVRAEWTEQMDTPADLTMPLLAYQREGLAWMHRQEHTEYHGGILADEMGMGKTIQTISLALSHRPDDKDQDQTAQWDAVETSMGREPDPARRAGTLVICPLVALLQWRSEIEKFVKEKGLTVCVHHGSKRASSAKDLQDADVVLTTYAIAEADYRKMQARTKVACPDCGRKLYPEKMILHRKYFCGESAQRTEAQAKTQRK 1170
+G T W HL+C F SP D+ G+ L + Q A+ R++ +Q+E P+DP+ VRA WTE+ TP D+ +PLL YQ+EGLAWM QE +++ GGILADEMGMGKT+QTI+ ++HRP + W A E + G PD A R GTLVICP++ALLQW++EIEKF E L V V+HG+KR +L+ ADVVLTTY++ ADY K+ A TK+ CPDCGR+ YP+K LH++YFCG+ AQRTEAQ+ TQR+
Sbjct: 205 FGLYTRWLHLKCAWFTGIQSPEDVAGWAALDEESQDAIADRLDKTQSEVAVDMRPVDPNECVRAAWTEKAATPVDIRLPLLPYQQEGLAWMLHQEKSDHRGGILADEMGMGKTLQTIATMVAHRPGPE---HARAWAAAERTHGLTPDAAGRCGTLVICPVIALLQWKAEIEKFTHEGALNVVVYHGAKRTKDLAELRRADVVLTTYSVVMADYNKVMAPTKITCPDCGRRFYPDKYRLHKQYFCGDDAQRTEAQSLTQRR 462
BLAST of mRNA_P-wetherbeei_contig6206.1.3 vs. uniprot
Match: W7TXY3_9STRA (Snf2 super family n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXY3_9STRA) HSP 1 Score: 282 bits (722), Expect = 1.350e-81 Identity = 144/262 (54.96%), Postives = 181/262 (69.08%), Query Frame = 1
Query: 391 WGPNTAWHHLQCTVFQ--CTSPLDIDGYDDLMPDDQMAVEKRVEASQNETDERYEPIDPSTLVRAEWTEQMDTPADLTMPLLAYQREGLAWMHRQEHTEYHGGILADEMGMGKTIQTISLALSHRPDDKDQDQTAQWDAVETSMGREPDPARRAGTLVICPLVALLQWRSEIEKFVKEKGLTVCVHHGSKRASSAKDLQDADVVLTTYAIAEADYRKMQARTKVACPDCGRKLYPEKMILHRKYFCGESAQRTEAQAKTQRK 1170
+G T W HL CT+F S I+GY+ L Q V+KRV S+ E DE +PID S LVR EWT Q + P L +P+L YQ+EGL WM+RQE E+HGGILADEMGMGKTIQ I++ L++RP + + W E S GR PDP RAGTLV+CPL+ALLQW++EI +F +E LTV V+HGS R + LQ ADVVLTTY+I EA+YRKM + KV C DCG++ YP+K+ LH++YFCGE A T AQA+TQRK
Sbjct: 146 FGIVTRWQHLPCTIFAEYLESEESIEGYEYLTEGQQALVKKRVAESREEEDEDSKPIDASELVRKEWTTQREPPETLVLPILPYQKEGLGWMYRQEQVEHHGGILADEMGMGKTIQAIAVMLANRPSEL---HSEAWTRQEASHGRAPDPCMRAGTLVVCPLIALLQWQTEIARFTREGSLTVLVYHGSSREDAKALLQQADVVLTTYSIVEAEYRKMMSPEKVKCEDCGKRFYPDKLRLHKRYFCGEGAVLTAAQARTQRK 404
BLAST of mRNA_P-wetherbeei_contig6206.1.3 vs. uniprot
Match: A0A7R9U350_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U350_9STRA) HSP 1 Score: 264 bits (674), Expect = 4.420e-79 Identity = 131/265 (49.43%), Postives = 175/265 (66.04%), Query Frame = 1
Query: 391 WGPNTAWHHLQCTVFQ-CTSPLDIDGYDDLMPDDQMAVEKRVEASQNETDERYEPIDPSTLVRAEWTEQMDTPADLTMPLLAYQREGLAWMHRQEHTEYHGGILADEMGMGKTIQTISLALSHRPDDKDQDQTAQWDAVETSMGREPDPARRAGTLVICPLVALLQWRSEIEKFVKEKGLTVCVHHGSKRASSAKDLQDADVVLTTYAIAEADYRKMQARTKVACPDCGRKLYPEKMILHRKYFCGESAQRTEAQAKTQRKKSKH 1182
+G T W HL C F P D+ G+ L + + + R+E +Q++ ++P VR WTE+ TP D+ +PLL YQ+EGLAWM QE +++ GGILADEMGMGKT+QTI+ + +RP + + A W E G +PD R GTLVICP++ALLQWR+EIEKF +E L V ++HG KR S ++LQ ADVVLTTY++ +ADY K+ A TK++CPDCG++ YP+K LHRKYFCG AQRT AQA TQR+ H
Sbjct: 231 FGLYTRWLHLSCAYFTGIRKPEDVKGFTALDEEQRAQLTARLEETQDKVPADMRAVEPDACVRKAWTEKRATPKDIKLPLLPYQQEGLAWMIHQEESDHRGGILADEMGMGKTLQTIATIVENRPGPEHE---AAWTEAERKHGLDPDQRVRCGTLVICPVIALLQWRAEIEKFTRENCLNVMIYHGQKRTSDVRELQAADVVLTTYSVVQADYSKVLAPTKISCPDCGKRFYPDKFRLHRKYFCGAQAQRTSAQALTQRRSGAH 492
BLAST of mRNA_P-wetherbeei_contig6206.1.3 vs. uniprot
Match: A0A7S3MHT9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHT9_9STRA) HSP 1 Score: 259 bits (661), Expect = 7.850e-73 Identity = 142/281 (50.53%), Postives = 177/281 (62.99%), Query Frame = 1
Query: 391 WGPNTAWHHLQCTVFQ--CTSPLDIDGYDDLMPDDQMAVEKRVEASQNETDERYEPIDPSTLVRAEWTEQMDTPADLTMPLLAYQREGLAWMHRQEHTEYHGGILADEMGMGKTIQTISLALSHRPDDKDQDQTAQWDAVE---------------TSMGRE-PDPARRAGTLVICPLVALLQWRSEIEKFVKEKGLTVCVHHGSKRASSAKDLQDADVVLTTYAIAEADYRKMQARTKVACPDCGRKLYPEKMILHRKYFCGESAQRTEAQAKTQRKKSK 1179
WG T W HL CTVF S ++DG+ DL + V++R S NE DE EPIDP LVR W + ++ +L MPLL YQ+EGL WM QE + HGGILADEMGMGKTIQ I+L L +RPD D Q +W A + TS E P+P R GTL++ P VA+ QW++EI +F KE LTV V+HGS R +SA DL D+VLT+Y I E +YRK A TKV C C +K YP+K+ +HRKYFCGESAQRT AQA TQ+KK++
Sbjct: 69 WGLFTRWQHLDCTVFHKGINSVEELDGFSDLNTQQKDLVKERFALSANEIDEDMEPIDPDELVRKAWEKPVEPSPNLLMPLLPYQKEGLGWMVNQEQNDVHGGILADEMGMGKTIQAIALMLQNRPDMSDFAQLREWAASDARHAAPAIADSSTSSTSSSSECPEPMVRCGTLIVLPTVAIRQWQTEIARFTKEGSLTVKVYHGSDRNTSALDLTKTDIVLTSYKILEIEYRKATAGTKVTCRVCQKKFYPDKLRVHRKYFCGESAQRTAAQALTQKKKAR 349
BLAST of mRNA_P-wetherbeei_contig6206.1.3 vs. uniprot
Match: A0A6G0XA82_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XA82_9STRA) HSP 1 Score: 196 bits (498), Expect = 3.210e-51 Identity = 109/269 (40.52%), Postives = 155/269 (57.62%), Query Frame = 1
Query: 376 LTYIMWGPNTAWHHLQCTVFQCTSPLDIDGYDDLMPDDQMAVEK-RVEASQNETDERYEPIDPSTLVRAEWTEQMDTPADLTMPLLAYQREGLAWMHRQEHTEYHGGILADEMGMGKTIQTISLALSHRPDDKDQDQTAQWDAVETSMGREPDPARRAGTLVICPLVALLQWRSEIEKFVKEKGLTVCVHHGSKRASSAKDLQDADVVLTTYAIAEADYRKMQARTKVACPDCGRKLYPEKMILHRKYFCGESAQRTEAQAKTQRKKSK 1179
L + +G NT + H++CT+ P+++DG DL P+D V+K +E S+ ++ P+ ++ + LT LL YQ+EGLAWM QE ++Y GGILADEMGMGKTIQ ISL L + + R GTL+ICP++A +QW+SEIE+FV+ L++ ++HG KR + A + DVVLTTY+I E++ RK+ KVAC C + PEK+I H KYFCG A +T+ QAK Q+ K K
Sbjct: 489 LVHSRFGLNTYYKHVECTLLNNEIPIELDGLRDLDPEDLAYVQKYMLENSKRGVEDERVPLSDEHFIKRDILPAAKPSPHLTASLLPYQQEGLAWMKAQEASKYRGGILADEMGMGKTIQAISLLLEN-----------------VKIKRSKGMLMGGGTLIICPVIACMQWKSEIERFVESNHLSILLYHGPKRTNLATHIASYDVVLTTYSILESEGRKLMEAEKVACAYCKKLFVPEKLIPHNKYFCGPDAHKTKKQAKQQKGKGK 740
BLAST of mRNA_P-wetherbeei_contig6206.1.3 vs. uniprot
Match: A0A1Z5KAJ8_FISSO (DNA repair protein RAD16 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KAJ8_FISSO) HSP 1 Score: 195 bits (496), Expect = 5.840e-51 Identity = 125/292 (42.81%), Postives = 165/292 (56.51%), Query Frame = 1
Query: 409 WHHLQCTVFQCTSPL--DIDGYDDLMPDDQMAVEKRVEASQNETDERYEPIDPSTLVRAEWTEQM-DTPADLTMPLLAYQREGLAWMHRQEHT--EYHGGILADEMGMGKTIQTISLALSHRPD-----------------DKDQDQTAQWDAV------ETSMGREPDPAR--------RAGTLVICPLVALLQWRSEIEKFV-KEKGLTVCVHHGSKRASSAK--DLQDADVVLTTYAIAEADYRKMQARTKVACPDCGRKLYPEKMILHRKYFCGESAQRTEAQAKTQR 1167
+ HL+C +F D+ G+ L +DQ A+ R++ S E + E + P LV+ ++ ++ D P LT LL +Q EG +WM+ QE E GGILADEMGMGKT+QTI L +RP +K Q + A W E M P+ AR RAGTLV+CP+VAL QW+SE+EKFV E GLTV ++HG KR S + DVVLTTY + E D+RKM + KVACP+CG K K+ +H KYFCGE+AQRTEAQA+ +R
Sbjct: 244 YRHLECAIFDSNVQTLQDVGGWQSLKVEDQEALSARIQESLKEIKQEEEELQPDELVQESFSGEIRDPPKGLTASLLPFQVEGASWMYCQEVNTPEIRGGILADEMGMGKTLQTIVSMLDNRPILQHSPPGVKHPPSSPDLEKRQAEEALWAKALEEWKHEMDMNNVPEKARPKGKKGGTRAGTLVVCPVVALSQWKSELEKFVDSEAGLTVGIYHGPKRNSEMPLDMMHKYDVVLTTYQVLEQDFRKMVSPNKVACPNCGGKFKISKLKIHLKYFCGENAQRTEAQARQRR 535
BLAST of mRNA_P-wetherbeei_contig6206.1.3 vs. uniprot
Match: A0A482RXU1_9ARCH (PARP-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXU1_9ARCH) HSP 1 Score: 182 bits (462), Expect = 3.790e-50 Identity = 104/229 (45.41%), Postives = 136/229 (59.39%), Query Frame = 1
Query: 391 WGPNTAWHHLQCTVFQ--CTSPLDIDGYDDLMPDDQMAVEKRVEASQNETDERYEPIDPSTLVRAEWTEQMDTPADLTMPLLAYQREGLAWMHRQEHTEYHGGILADEMGMGKTIQTISLALSHRPDDKDQDQTAQWDA----------VETSMGREPDPARRAGTLVICPLVALLQWRSEIEKFVKEKGLTVCVHHGSKRASSAKDLQDA--DVVLTTYAIAEADYRK 1035
WG T W HL CT+F TS IDGY L P D++ V++R EAS++E DE PIDP L+R W + ++ ADL MPLL YQ+EGL W QE ++ HGGILADEMGMGKTIQ I+L L +RP D + W A ETS P RAGTL++ P VA+ QW+ EI +F +E L V V+HGS R +D+ + DVV+T+Y ++ + K
Sbjct: 78 WGLFTRWQHLDCTIFHKSLTSVDQIDGYLILSPSDKLLVQERFEASKHEVDEDSVPIDPDELIRKSWNQPLEPHADLLMPLLPYQKEGLGWCVAQERSDVHGGILADEMGMGKTIQAIALMLHNRPARGDAELEEVWAASDNAHAHSTLTETSSIHAQLP--RAGTLIVLPTVAIRQWQLEIVRFTRESSLRVKVYHGSDRNLGVEDITEGEYDVVITSYKVSSCNLDK 304 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6206.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6206.1.3 >prot_P-wetherbeei_contig6206.1.3 ID=prot_P-wetherbeei_contig6206.1.3|Name=mRNA_P-wetherbeei_contig6206.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=433bp MADVASDSGDSGSEFEADSSSSTESDSDKPGEFEPESDVEEEKPKKRSPPback to top mRNA from alignment at P-wetherbeei_contig6206:370..3128- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6206.1.3 ID=mRNA_P-wetherbeei_contig6206.1.3|Name=mRNA_P-wetherbeei_contig6206.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2759bp|location=Sequence derived from alignment at P-wetherbeei_contig6206:370..3128- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6206:370..3128- >mRNA_P-wetherbeei_contig6206.1.3 ID=mRNA_P-wetherbeei_contig6206.1.3|Name=mRNA_P-wetherbeei_contig6206.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1299bp|location=Sequence derived from alignment at P-wetherbeei_contig6206:370..3128- (Phaeothamnion wetherbeei SAG_119_79)back to top |