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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 1209 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 1206 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186893.7841482-CDS-P-wetherbeei_contig617:6432..6525 | 1683186893.7841482-CDS-P-wetherbeei_contig617:6432..6525 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig617 6433..6525 - |
| 1683186893.7957795-CDS-P-wetherbeei_contig617:6988..7162 | 1683186893.7957795-CDS-P-wetherbeei_contig617:6988..7162 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig617 6989..7162 - |
| 1683186893.8045774-CDS-P-wetherbeei_contig617:7441..8380 | 1683186893.8045774-CDS-P-wetherbeei_contig617:7441..8380 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig617 7442..8380 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig617.7.1 >prot_P-wetherbeei_contig617.7.1 ID=prot_P-wetherbeei_contig617.7.1|Name=mRNA_P-wetherbeei_contig617.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=402bp
RPSPFPSHRFHGQDVRRTLSVHSLGMTGSAPGGLVLYLDEVEKETVSPPP
RRGHQNQSNGHVHNDNEESRGTDYQLHERRKEEAASSSGIHTAGTSAPAQ
QRRWVWDEWDPNEDDGTEESGWDTGPTTQQRVSKISPAGAELAPISHVGG
RRNHSVQTRHSAAENAALRSEGQGAAQFTWSEELPPPHYTLRPAGNTPAG
SFSWHASGRARGHRDDDGGGTSSRDGRGSRSSFHHAGAASWHGSCTTDGG
DNRGGGDDIREAVFGGQAPSTERDTFAGFEGPVAAHKGRAEELRVLVRKG
RAEVRELKLALAKARAATEARRDKLTRKWAARAEHGEEEHAAAAERQRGF
AAEIETDVAALTAKCAVLERQVAKLAASREATVAATTADGVRRLRQARES
WQ back to topmRNA from alignment at P-wetherbeei_contig617:6432..8380- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig617.7.1 ID=mRNA_P-wetherbeei_contig617.7.1|Name=mRNA_P-wetherbeei_contig617.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1949bp|location=Sequence derived from alignment at P-wetherbeei_contig617:6432..8380- (Phaeothamnion wetherbeei SAG_119_79)
CGTCCGTCCCCGTTTCCCTCTCACCGCTTCCATGGTCAAGACGTCAGACG
TACGCTTTCTGTCCACTCTTTGGGGATGACTGGTTCGGCACCTGGAGGCC
TTGTCCTGTATTTAGATGAGGTGGAGAAGGAGACCGTGAGCCCGCCGCCG
CGACGCGGGCACCAGAACCAATCCAACGGCCATGTTCACAATGACAACGA
GGAAAGTAGAGGCACAGACTACCAGCTCCATGAGAGACGCAAGGAGGAAG
CAGCGAGCTCTAGCGGAATACATACTGCTGGCACATCGGCTCCCGCGCAG
CAGCGGCGGTGGGTCTGGGACGAGTGGGATCCCAACGAAGACGACGGCAC
TGAGGAGAGCGGATGGGACACTGGTCCAACCACTCAGCAGCGCGTCTCGA
AGATATCGCCTGCCGGAGCCGAGCTGGCACCGATTTCGCACGTGGGCGGC
CGTCGCAATCATTCTGTGCAAACGAGGCATTCGGCAGCCGAGAATGCAGC
TTTAAGAAGTGAAGGCCAGGGCGCTGCCCAGTTCACCTGGTCCGAGGAGC
TGCCGCCGCCGCACTACACCCTCCGTCCTGCAGGAAATACCCCGGCTGGA
TCATTCTCCTGGCACGCGAGCGGCCGTGCACGCGGTCACCGTGATGATGA
CGGCGGTGGCACTAGCAGCAGAGACGGCCGTGGCAGCCGCAGCTCTTTCC
ATCACGCCGGAGCTGCATCATGGCATGGCAGCTGCACCACAGACGGCGGC
GACAACCGCGGTGGCGGCGACGACATCAGAGAAGCCGTCTTCGGCGGCCA
AGCTCCATCAACGGAGAGGGACACATTTGCGGGCTTCGAAGGGCCGGTGG
CGGCGCACAAGGGGCGCGCAGAGGAGCTGCGTGTCCTTGTCCGCAAAGGG
AGGGCGGAGGTGCGGGAACTCAAGCTCGCCCTCGCCAAAGTCAGTTTGAC
AACCGGTTTCCTTCGAACTAAGTTTCTCTTGCCTCAGATGGTGCCAGGCT
GTGGATGGGCGGAAGTTTCGCCCGCCGTGTGGAGACCACAAGAAGCTGCG
AAAGGTTTTGGAGTTATCTTTGATCTCTCTCAATCCCAGACTCGCTGCAG
GCAGCGCTGAGAAGAACCAGGAGCAGAGCTTGGCCCTAAATTCAGAGCCA
TCACCGATGCAAAATGTGTTTCTTTTCACACGTCCCGCTTCCTCTCTTGG
TCTGCTCTTGAACGGCAGGCGCGGGCGGCAACGGAGGCACGGCGCGACAA
GTTGACCCGCAAGTGGGCAGCGCGGGCGGAGCACGGGGAGGAGGAGCACG
CGGCGGCGGCAGAACGGCAGCGGGGCTTCGCCGCCGAGATTGAAACGGAT
GTGGCGGCGCTCACCGCCAAGTGCGCCGTGCTGGAGCGGCAGGCGAGTTG
TTTTGGACGCCGCTGCAACTGTTTCTCCGTTCTCCGCAGGTTTCAATTCC
GTTCCTCGTAGCCATCATGCGCTGAGGATCTTGCCCTCTATTCACCTCTC
ATCGTTCGATCGCAAGGCGTCAGAGGCTGGAAAGTCCTACTGCGGCGCTT
TTATGGTTTTCTAGAACGGTGTCGCGGAAATATGCCATGAGGTTTCCTTC
GTGTTCCTTCGTACTTTTCAAGCCTGCGCGCCTGTGCCGTTGGATCCTGT
CCTGTCTGGTTCTTTATGTCCTCCATCCAATCATAGCTGTGGCTCTGTCA
CTATCCTCAGTGCTGCCGCTGCCGCCGCCGCCGCCCTGCCACCGCAAAAT
GTGTCGAAGCTCTTTTTCTCTCCATTCACCTTTGCCGCATTTTTATCTTT
CCTTAGTCAGCTATACCTATGCTGCTCTCCACTCATACGCTCTCCTTTCC
CGCAGGTGGCCAAGTTGGCGGCGTCGCGGGAGGCCACCGTCGCCGCCACG
ACCGCCGACGGCGTCCGCCGGCTGCGGCAGGCGCGCGAGAGCTGGCAGC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig617:6432..8380- >mRNA_P-wetherbeei_contig617.7.1 ID=mRNA_P-wetherbeei_contig617.7.1|Name=mRNA_P-wetherbeei_contig617.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1206bp|location=Sequence derived from alignment at P-wetherbeei_contig617:6432..8380- (Phaeothamnion wetherbeei SAG_119_79)
CGTCCGTCCCCGTTTCCCTCTCACCGCTTCCATGGTCAAGACGTCAGACG
TACGCTTTCTGTCCACTCTTTGGGGATGACTGGTTCGGCACCTGGAGGCC
TTGTCCTGTATTTAGATGAGGTGGAGAAGGAGACCGTGAGCCCGCCGCCG
CGACGCGGGCACCAGAACCAATCCAACGGCCATGTTCACAATGACAACGA
GGAAAGTAGAGGCACAGACTACCAGCTCCATGAGAGACGCAAGGAGGAAG
CAGCGAGCTCTAGCGGAATACATACTGCTGGCACATCGGCTCCCGCGCAG
CAGCGGCGGTGGGTCTGGGACGAGTGGGATCCCAACGAAGACGACGGCAC
TGAGGAGAGCGGATGGGACACTGGTCCAACCACTCAGCAGCGCGTCTCGA
AGATATCGCCTGCCGGAGCCGAGCTGGCACCGATTTCGCACGTGGGCGGC
CGTCGCAATCATTCTGTGCAAACGAGGCATTCGGCAGCCGAGAATGCAGC
TTTAAGAAGTGAAGGCCAGGGCGCTGCCCAGTTCACCTGGTCCGAGGAGC
TGCCGCCGCCGCACTACACCCTCCGTCCTGCAGGAAATACCCCGGCTGGA
TCATTCTCCTGGCACGCGAGCGGCCGTGCACGCGGTCACCGTGATGATGA
CGGCGGTGGCACTAGCAGCAGAGACGGCCGTGGCAGCCGCAGCTCTTTCC
ATCACGCCGGAGCTGCATCATGGCATGGCAGCTGCACCACAGACGGCGGC
GACAACCGCGGTGGCGGCGACGACATCAGAGAAGCCGTCTTCGGCGGCCA
AGCTCCATCAACGGAGAGGGACACATTTGCGGGCTTCGAAGGGCCGGTGG
CGGCGCACAAGGGGCGCGCAGAGGAGCTGCGTGTCCTTGTCCGCAAAGGG
AGGGCGGAGGTGCGGGAACTCAAGCTCGCCCTCGCCAAAGCGCGGGCGGC
AACGGAGGCACGGCGCGACAAGTTGACCCGCAAGTGGGCAGCGCGGGCGG
AGCACGGGGAGGAGGAGCACGCGGCGGCGGCAGAACGGCAGCGGGGCTTC
GCCGCCGAGATTGAAACGGATGTGGCGGCGCTCACCGCCAAGTGCGCCGT
GCTGGAGCGGCAGGTGGCCAAGTTGGCGGCGTCGCGGGAGGCCACCGTCG
CCGCCACGACCGCCGACGGCGTCCGCCGGCTGCGGCAGGCGCGCGAGAGC
TGGCAG back to top
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