prot_P-wetherbeei_contig6164.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6164.1.1
Unique Nameprot_P-wetherbeei_contig6164.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length488
Homology
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A1F3YHA4_9PROT (Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YHA4_9PROT)

HSP 1 Score: 681 bits (1758), Expect = 1.080e-241
Identity = 356/483 (73.71%), Postives = 418/483 (86.54%), Query Frame = 0
Query:    1 MFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQEAR 483
            MF R++RLPA FFD+ SSGA++SK+AYDV GVT+AAT+V+T  V+DS+ VIGLL WL+Y+NWKLTL+ALAVGP ++L V+L S RLR+M+R AQ AMG+L HVL+ETIECHKVVKVFGGQ+YEA RFE+ANQ+LRGF MRQTVPAALT PVT  LAA+ALAII+YI L ES+A RAT+GEF SF+TAMLMLLSPLKHLTE++APLQRGLAAAESVF LID P E D+G+  L RA+G + F+ VS TY TR EPAL+++ F++ PGETVALVGGSGGGKTTLANL+PRFYAP SGRI LDG+DLQ L L+SLR N+ALVSQDVVLFND+I ANIAYGR+   +   + AAAEAAHAM+FIR+TPQGL+T+IGENGMRLSGGQRQRLAIARALLK+APVLILDEATSALDSESER VQ ALE LM+GRTTLVIAHRLSTIE ADRI+VLERG I E+G HV+L+A GG YARLY  Q+A + A+
Sbjct:   73 MFARLVRLPARFFDDHSSGAVLSKVAYDVGGVTSAATTVLTAAVQDSIRVIGLLGWLLYLNWKLTLIALAVGPPIALFVRLLSGRLRSMAREAQHAMGDLVHVLEETIECHKVVKVFGGQEYEARRFERANQRLRGFAMRQTVPAALTTPVTHFLAALALAIIVYIALEESLAARATLGEFASFMTAMLMLLSPLKHLTEINAPLQRGLAAAESVFELIDTPAEEDKGAGQLARARGEIEFQSVSLTYPTRTEPALSSVSFALRPGETVALVGGSGGGKTTLANLLPRFYAPDSGRILLDGHDLQTLKLESLRANLALVSQDVVLFNDSIRANIAYGRMGAASDREVTAAAEAAHAMEFIRETPQGLETLIGENGMRLSGGQRQRLAIARALLKNAPVLILDEATSALDSESERLVQQALETLMRGRTTLVIAHRLSTIERADRIVVLERGRIAETGTHVELIARGGVYARLYQMQFATENAK 555          
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A521VDM5_9PROT (Lipid A export permease/ATP-binding protein MsbA n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521VDM5_9PROT)

HSP 1 Score: 682 bits (1759), Expect = 2.070e-241
Identity = 354/480 (73.75%), Postives = 421/480 (87.71%), Query Frame = 0
Query:    1 MFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQ 480
            MF+R++RLP  FFD+ SSG L+S+IAYDV GVT+AATSV+TV+V+DS+AVIGLL WL Y+NWKLTL+ALAVGP ++LVV+LFS+RLR M+R AQ AMG L  VLQETIEC +VVK+FGGQDYEA RF +ANQ LRG+NMRQT+PAA TVP+TQILA+ ALAIIIYI L +S+A RAT+GEF SF+TAMLMLL+PLK LT+++APLQRGLAAAESVFGLID P+E DRG++ L+RA+G V +E VSFTYATR+E AL+ + F+V PGETVALVG SGGGKTTL NL+PRFY+P+ GRI LDG D+QDLTL+SLRGNIALVSQ+VVLFND+I ANIAYGR++G +   ++AAAEAAHAM+FI  TP+GL T+IGENG+RLSGGQRQRLAIARALLK+APVLILDEATSALDSESER VQAALEVLM+GRTT+VIAHRLSTIE ADRI+VLERG I ESG H +LLA  G YA+LY  Q+A+Q
Sbjct:  104 MFERLVRLPTRFFDDHSSGVLLSRIAYDVGGVTSAATSVLTVVVKDSIAVIGLLGWLFYLNWKLTLIALAVGPAIALVVRLFSRRLRRMAREAQHAMGELVQVLQETIECQRVVKIFGGQDYEARRFARANQTLRGYNMRQTIPAAATVPMTQILASFALAIIIYIALEDSLASRATVGEFASFITAMLMLLAPLKRLTDVNAPLQRGLAAAESVFGLIDAPIEEDRGTLRLERARGEVRYEDVSFTYATRSEAALSGVSFAVRPGETVALVGPSGGGKTTLVNLLPRFYSPAGGRILLDGQDIQDLTLESLRGNIALVSQEVVLFNDSIRANIAYGRMSGVSEAEVIAAAEAAHAMEFIGATPEGLGTLIGENGLRLSGGQRQRLAIARALLKNAPVLILDEATSALDSESERAVQAALEVLMRGRTTIVIAHRLSTIERADRIVVLERGGIAESGTHAELLAREGLYAKLYRIQFASQ 583          
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A1F4EXY1_9PROT (Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4EXY1_9PROT)

HSP 1 Score: 681 bits (1756), Expect = 1.120e-240
Identity = 347/484 (71.69%), Postives = 418/484 (86.36%), Query Frame = 0
Query:    1 MFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQEARP 484
            MF R++R PA FFD+ SSG L+SK+AYDV GV AAAT+V+T+ ++D++AV GLLAWL+YINWKLTL+ALAVGP ++  V+L S+RLR+M+RGAQ AMG L+HVL+E+IECH+VVKVFGGQDYE+ RF +ANQ LRGFNMRQTVPAALT P+T  LAA AL++I+YI L+ES+A RAT+GEF SF+TAMLMLL+PLK LTEL+APLQRGLAAAESVF +ID PVE DRG++VL RA+G V +E V+FTY+TR EPAL  +   V PGETVALVGGSGGGKTTL NL+PRFYAP +GRI LDG+D+Q LTL+SLR NIALVSQD+VLFND+I ANIAYGR+ G     ++AAAEAAHA+ FIR+TP+GL+T+IGENG+RLSGGQRQRLAIARALLK+APVLILDEATS+LD+ESERQVQAALE LM+GR T+VIAHRLST+E ADRI+VLERG I+ESGRH +LLA GG YARLY  Q+ A+   P
Sbjct:  105 MFARLVRFPAKFFDDHSSGVLLSKVAYDVGGVMAAATTVLTIAIKDTIAVAGLLAWLLYINWKLTLIALAVGPPIAWAVRLLSRRLRSMARGAQHAMGELAHVLEESIECHRVVKVFGGQDYESGRFARANQLLRGFNMRQTVPAALTTPITYTLAAAALSVIVYIALQESLANRATVGEFASFITAMLMLLAPLKRLTELNAPLQRGLAAAESVFEMIDTPVEEDRGTIVLPRARGEVVYENVAFTYSTRTEPALAGVSLQVRPGETVALVGGSGGGKTTLVNLLPRFYAPGAGRILLDGHDIQTLTLESLRANIALVSQDIVLFNDSIYANIAYGRMGGAAAREVIAAAEAAHAIGFIRETPEGLNTLIGENGLRLSGGQRQRLAIARALLKNAPVLILDEATSSLDTESERQVQAALETLMRGRATIVIAHRLSTVERADRIVVLERGRIMESGRHAELLARGGVYARLYHLQFTAEAVSP 588          
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A537D9W3_9PROT (Lipid A export permease/ATP-binding protein MsbA n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537D9W3_9PROT)

HSP 1 Score: 672 bits (1735), Expect = 1.260e-237
Identity = 343/478 (71.76%), Postives = 417/478 (87.24%), Query Frame = 0
Query:    1 MFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYA 478
            MF R++RLP  FFD+ SSG L+SKIAYDV GVT AATSV+TV V+DS+AV GLL WL Y+NWKLTL+ALAVGPL++  V+L S+RLR M+R AQ +MG+L+HVL+ETIECH+VVKVFGGQ+YE+ RFE+ANQ +RGFNMRQT+ A+LT P+T +LA++ALA+I+Y+ + +S+A R T+GEF SF+TAMLMLL+PLKHLTE+ APLQRGLAAAESVFG+ID PVE DRG+VVL RA+G + +ERV FTY TR+EPAL +I+  + PGETVALVGGSGGGKTTL NL+PRFYAP++GRI LDG+DLQ+LTL SLR NIALVSQD+VLFND+I ANIAYGRL G + + ++AAAEAAHAM FIR+TP+GL T+IGE+G+RLSGGQRQRLAIARALLK+APVLILDEATS+LD+ESER VQAAL+ LM+GRTT+VIAHRLST+E ADRI+VLERG IVE GRH +LLA  G YARLY  Q+A
Sbjct:  101 MFSRLVRLPTRFFDDNSSGVLLSKIAYDVMGVTMAATSVITVAVKDSIAVAGLLGWLFYLNWKLTLIALAVGPLIAWSVRLVSRRLRRMAREAQRSMGDLAHVLEETIECHRVVKVFGGQEYESRRFERANQAVRGFNMRQTIAASLTNPITHVLASVALAVIVYLAMEQSLAARTTVGEFASFLTAMLMLLAPLKHLTEIQAPLQRGLAAAESVFGMIDTPVEEDRGTVVLPRARGELAYERVGFTYPTRDEPALADINLQIRPGETVALVGGSGGGKTTLVNLLPRFYAPTTGRILLDGHDLQELTLASLRANIALVSQDIVLFNDSIYANIAYGRLRGASEKEVIAAAEAAHAMSFIRETPEGLGTLIGESGVRLSGGQRQRLAIARALLKNAPVLILDEATSSLDTESERHVQAALDALMRGRTTIVIAHRLSTVERADRIVVLERGRIVEIGRHAELLAKRGIYARLYELQFA 578          
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A1F3Z8K6_9PROT (Lipid A export permease/ATP-binding protein MsbA (Fragment) n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_67_12 TaxID=1797483 RepID=A0A1F3Z8K6_9PROT)

HSP 1 Score: 671 bits (1730), Expect = 2.320e-237
Identity = 350/485 (72.16%), Postives = 419/485 (86.39%), Query Frame = 0
Query:    1 MFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQEARPA 485
            MF R++R+P  FFD+ SSGAL+SK+AYDV GVT+AAT+V++V V+DS+AV+ LLAWL ++NWKLTL+ALA  PL++L V+LFS+RLR M+R AQ AMG+L HVL+ETIECHKVVKVFGG +YE  RF +ANQ+LRGF+MRQTVPAA TVP+TQILA+ ALAII+YI L +S+A R T+GEFVSFVTAMLML +PLK LT+++APLQRGLAAAESVFGLID PVE DRG+V L+RA+G V +E VSFTY TR E AL+ +  +V PGETVALVG SGGGKTTL NL+PRFYAP++GRI LDG D+QDL L+SLRGN+ALVSQDVVLFNDTI ANIAYG+L G + + +VAAAEAAHA++FIR+T  GL T+IGENG+RLSGGQRQRLAIARALLK+APVLILDEATSALDSESER VQ+ALEVLM+GRTT+VIAHRLSTIE ADRI+VLERG+I E+G H +LLA  G YARL+  Q+A Q A PA
Sbjct:   56 MFARLVRMPTRFFDDHSSGALLSKVAYDVNGVTSAATTVLSVAVKDSVAVLALLAWLFFLNWKLTLIALAAAPLIALAVRLFSRRLRRMAREAQHAMGDLVHVLEETIECHKVVKVFGGHEYEMGRFGRANQRLRGFSMRQTVPAAATVPITQILASTALAIIVYIALEDSLASRTTVGEFVSFVTAMLMLFAPLKRLTDVNAPLQRGLAAAESVFGLIDAPVEEDRGTVRLERARGEVRYENVSFTYPTRTEAALSGVTLAVRPGETVALVGPSGGGKTTLVNLLPRFYAPTAGRILLDGYDIQDLGLESLRGNVALVSQDVVLFNDTIRANIAYGKLGGVSEQEVVAAAEAAHAIEFIRETQDGLQTLIGENGLRLSGGQRQRLAIARALLKNAPVLILDEATSALDSESERLVQSALEVLMRGRTTIVIAHRLSTIERADRIVVLERGKIAETGSHAELLARDGIYARLHRIQFATQAAGPA 540          
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A1F4EYU6_9PROT (Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4EYU6_9PROT)

HSP 1 Score: 670 bits (1728), Expect = 1.060e-236
Identity = 345/480 (71.88%), Postives = 414/480 (86.25%), Query Frame = 0
Query:    1 MFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQ 480
            MF R++RLP  FFD+ SSG L+S+IAYDV GVT+AAT+V+T++V+DS+AVIGLLAWL Y+NWKLTL+ALAVGP ++LVV+LFS+RLR M+R AQ AMG+L  VL ETIEC +VVK+FGGQDYE  RFE+ANQ+LRGFNMRQT+PAA TVP+TQ LAA  LAII+YI L ES++ R T+GEF SF+TAMLMLL+PLK LT+++APLQRGLAAAESVFGLID PVE DRG++ L+RA+G +  + VSFTY TR+EPAL+ +  ++ PGETVALVGGSGGGKTTL NL+PRFY P+ GRI LDGND+Q L L+SLRGN+ALVSQDVVLFND+I ANIAYGR+   +   ++AAAEAAHAM+FIR TP+GL T+IGENG+RLSGGQRQRLAIARALLKDAPVLILDEATSALDSESER VQ+ALEVLM+GRTT+VIAHRLSTIE ADRI+VLERG I E+G H  LLA  G YA+LY  Q+A++
Sbjct:  104 MFARLLRLPNRFFDDHSSGVLLSRIAYDVGGVTSAATTVLTIVVKDSIAVIGLLAWLCYLNWKLTLIALAVGPAIALVVRLFSRRLRRMAREAQHAMGDLVQVLDETIECQRVVKIFGGQDYEMRRFERANQKLRGFNMRQTIPAAATVPITQFLAAGVLAIIVYIALEESLSSRTTVGEFASFITAMLMLLAPLKRLTDVNAPLQRGLAAAESVFGLIDAPVEEDRGTLRLERARGAIDCQNVSFTYPTRDEPALSGVSLAIRPGETVALVGGSGGGKTTLVNLLPRFYVPTGGRILLDGNDIQGLALESLRGNLALVSQDVVLFNDSIRANIAYGRMGSASEAEVIAAAEAAHAMEFIRGTPEGLGTLIGENGLRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERLVQSALEVLMRGRTTIVIAHRLSTIERADRIVVLERGRIAETGTHAQLLAREGVYAKLYRIQFASE 583          
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A1F4B136_9PROT (Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4B136_9PROT)

HSP 1 Score: 667 bits (1722), Expect = 8.630e-236
Identity = 349/480 (72.71%), Postives = 412/480 (85.83%), Query Frame = 0
Query:    1 MFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQ 480
            MF R+IR+P  FFD+ SSG L+S+IAYDV GVTAAAT+V+TV VRDS+AV+GLL WL Y+NWKLTL+AL VGP ++LVV+LFSKRLR M+R +Q AMG+L HVL+ETIEC +VVKVFGGQ+YEA RFE+ANQ+LRGFNMRQTVPAA TVP+TQ+LAA+ALAII+YI L ESI+ R T+GEF SF+TA LMLL+PLK LT+++APLQRGLAAAESVFG+ID PVE DRG+  ++RA+G + ++ VSFTY TR   AL  +   V PGETVALVG SGGGKTTL NL+PRFYAPS GRI LDG+DLQDL L+SLR NIALVSQDVVLFND+I ANIAYGR++G +   ++AAAEAAHAM++IRQTP+GL T+IGENG+RLSGGQRQRLAIARALLK+APVLILDEATS+LDSESER VQAALEVLM+GRTT+VIAHRLSTIE ADRI VL  G IVESG H +LLA  G YARLY  Q+A +
Sbjct:  104 MFARLIRMPTRFFDDHSSGVLLSRIAYDVGGVTAAATTVLTVAVRDSIAVLGLLGWLFYLNWKLTLIALLVGPAIALVVRLFSKRLRRMARESQHAMGDLVHVLEETIECQRVVKVFGGQEYEARRFERANQKLRGFNMRQTVPAAATVPITQMLAAVALAIIVYIALEESISNRTTVGEFASFITATLMLLAPLKRLTDVNAPLQRGLAAAESVFGMIDSPVEEDRGTRRIERARGGIVYDDVSFTYPTRTAAALAGVSLEVHPGETVALVGPSGGGKTTLVNLLPRFYAPSGGRILLDGHDLQDLALESLRANIALVSQDVVLFNDSIRANIAYGRMSGASEAEVIAAAEAAHAMEYIRQTPEGLGTLIGENGLRLSGGQRQRLAIARALLKNAPVLILDEATSSLDSESERLVQAALEVLMRGRTTIVIAHRLSTIERADRIAVLASGRIVESGTHAELLAREGLYARLYRIQFATE 583          
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: UPI0019CBA76D (Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019CBA76D)

HSP 1 Score: 667 bits (1720), Expect = 3.050e-235
Identity = 348/485 (71.75%), Postives = 411/485 (84.74%), Query Frame = 0
Query:    1 MFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQEARPA 485
            MF R++R+PA FFD+ SSG+++SK+AYDV GVTAAAT+V+TV V+D++A+IGLLAWL Y+NWKLTLVALAVGPL++L V+L S+RLR+M+R AQ +MG+L HVL+ETIECHKVVK+FGGQ YEA RF++ANQ+LRGFNMRQTVPAALT PVT ILA+ ALAII+Y+ + +S+A R T+GEF SF TAML+LL+PLKHLTE++APLQRGLAAAESVF LID PVE D G + + RA+G + F+ V  TYATR EPAL  + F+V PGETVALVGGSGGGKTTL NL+PRFY+P SGRI LDG DLQ L L+SLR N+ALVSQDVVLFNDTI ANIAYG +       +  AA+AAHAMDFIR+ PQGLDT+IGENGMRLSGGQRQRLAIARALLK+APVLILDEATSALDSESER VQ ALE LM+GRTT+VIAHRLSTIE ADRI+VLERG + E G H +LLA GG YARLY  QYAA+  + A
Sbjct:  115 MFARLVRMPARFFDDHSSGSVLSKVAYDVGGVTAAATTVLTVAVKDTIAIIGLLAWLFYLNWKLTLVALAVGPLIALFVRLLSRRLRSMAREAQHSMGDLVHVLEETIECHKVVKIFGGQAYEARRFQRANQRLRGFNMRQTVPAALTTPVTHILASTALAIILYLAMEDSLAGRITVGEFASFFTAMLLLLAPLKHLTEINAPLQRGLAAAESVFELIDAPVEEDAGRLEIARARGQIEFQAVCLTYATRIEPALAGVSFAVQPGETVALVGGSGGGKTTLVNLLPRFYSPQSGRILLDGIDLQALKLESLRANLALVSQDVVLFNDTIRANIAYGAMGAAGEREVTEAAQAAHAMDFIREMPQGLDTLIGENGMRLSGGQRQRLAIARALLKNAPVLILDEATSALDSESERLVQDALETLMRGRTTIVIAHRLSTIERADRIVVLERGLVAEEGTHDELLARGGIYARLYRIQYAAEHVKDA 599          
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A521VQ12_9PROT (Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VQ12_9PROT)

HSP 1 Score: 666 bits (1718), Expect = 3.490e-235
Identity = 347/478 (72.59%), Postives = 411/478 (85.98%), Query Frame = 0
Query:    1 MFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYA 478
            MF R++RLP  FFD+ SSG L+S+IAYDV GVT+AATSV+TV+V+DS+AVIGLL WL Y+NWKLTL+ALAVGP ++LVV+LFS+RLR M+R AQ AMG+L HVL+ETIEC +VVK+FGGQ+YEA RFE ANQ+LRGFNMRQT+ A+ TVP+TQILA+ ALAII+YI L ES++   T+GEF SF+TA LMLL+PLK LT+++APLQRGLAAAESVFGLID PVE DRG+V L RA+G + FE VSFTY TR EPAL  +  +V PGETVALVG SGGGK+TL NL+PRFYAPSSGRI LDG D+Q LTL+SLRGNIALVSQDVVLFND+I ANIAYGR++G     ++AAA+AAHAM+FIR TP+GL T+IGENG+RLSGGQRQRLAIARALLK+APVLILDEATSALDSESER VQ+ALE LM+GR+T+VIAHRLSTIE ADRI+VLERG + E G H +LLA  G YARLY  Q+A
Sbjct:  104 MFARLVRLPTRFFDDHSSGVLLSRIAYDVGGVTSAATSVLTVVVKDSIAVIGLLGWLFYLNWKLTLIALAVGPAIALVVRLFSRRLRRMAREAQHAMGDLVHVLEETIECQRVVKIFGGQEYEAGRFEHANQKLRGFNMRQTIAASATVPMTQILASAALAIIVYIALEESLSSGTTVGEFTSFITATLMLLAPLKRLTDVNAPLQRGLAAAESVFGLIDAPVEEDRGTVQLARARGDIAFEDVSFTYPTRTEPALAGVSLTVRPGETVALVGTSGGGKSTLINLLPRFYAPSSGRILLDGRDIQGLTLESLRGNIALVSQDVVLFNDSIRANIAYGRMSGAAEADVIAAAQAAHAMEFIRATPEGLGTLIGENGLRLSGGQRQRLAIARALLKNAPVLILDEATSALDSESERAVQSALEELMRGRSTIVIAHRLSTIERADRIVVLERGRVAECGTHAELLAREGVYARLYRIQFA 581          
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A521Z5Q4_9PROT (Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521Z5Q4_9PROT)

HSP 1 Score: 652 bits (1682), Expect = 7.720e-230
Identity = 335/482 (69.50%), Postives = 408/482 (84.65%), Query Frame = 0
Query:    1 MFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQEA 482
            MF +++R PA +FD++SSG L+S++AYDV+GV  +AT+V+TV V+DS+AVIGLL WL Y++W+LTL+ALAVGPL++L VKL SKRLR M+R AQ AMG + HVL+E+I+ HKVVK+FGGQDYEA RF +A Q LRG++MRQ VP ALT PVT  LAA+ALAII+YI +R S+  RAT+G+F SF+TAMLMLL+P+K LTE++ PLQRGLAAAESVFG+ID PVE DRG+V L RA+G V +E ++F Y TR EPAL NID  + PGETVALVGGSGGGKTTL NL+PRFY P++GR+ LDG+D+Q LTL SLR NIALVSQD+VLFND+I ANIAYG + G   + ++AAAEAAHAM FIR+ P+GL+T IGE+G+RLSGGQRQRLAIARALLK+APVLILDEATSALDSESERQVQAAL+ LM+GRTT+VIAHRLSTIEHADRI+VLERG IVE GRH +LLA  G YARLY  Q+ A+ A
Sbjct:   93 MFAKLVRFPARYFDDQSSGVLLSRVAYDVSGVAGSATTVLTVTVKDSVAVIGLLGWLFYLSWQLTLIALAVGPLIALFVKLLSKRLRRMAREAQHAMGGIVHVLEESIQAHKVVKIFGGQDYEAGRFARATQLLRGYHMRQAVPEALTTPVTHTLAAVALAIIVYIAMRASLEDRATVGQFASFITAMLMLLAPIKRLTEINGPLQRGLAAAESVFGMIDNPVEEDRGTVKLPRARGEVAYENLTFVYPTRTEPALQNIDLHIRPGETVALVGGSGGGKTTLVNLLPRFYTPTAGRVLLDGHDIQTLTLQSLRANIALVSQDIVLFNDSIYANIAYGTMNGAAEKEVIAAAEAAHAMTFIRELPEGLNTPIGESGVRLSGGQRQRLAIARALLKNAPVLILDEATSALDSESERQVQAALDTLMRGRTTIVIAHRLSTIEHADRIVVLERGRIVEIGRHAELLAKEGAYARLYRMQFDAERA 574          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F3YHA4_9PROT1.080e-24173.71Lipid A export permease/ATP-binding protein MsbA n... [more]
A0A521VDM5_9PROT2.070e-24173.75Lipid A export permease/ATP-binding protein MsbA n... [more]
A0A1F4EXY1_9PROT1.120e-24071.69Lipid A export permease/ATP-binding protein MsbA n... [more]
A0A537D9W3_9PROT1.260e-23771.76Lipid A export permease/ATP-binding protein MsbA n... [more]
A0A1F3Z8K6_9PROT2.320e-23772.16Lipid A export permease/ATP-binding protein MsbA (... [more]
A0A1F4EYU6_9PROT1.060e-23671.88Lipid A export permease/ATP-binding protein MsbA n... [more]
A0A1F4B136_9PROT8.630e-23672.71Lipid A export permease/ATP-binding protein MsbA n... [more]
UPI0019CBA76D3.050e-23571.75Lipid A export permease/ATP-binding protein MsbA n... [more]
A0A521VQ12_9PROT3.490e-23572.59Lipid A export permease/ATP-binding protein MsbA n... [more]
A0A521Z5Q4_9PROT7.720e-23069.50Lipid A export permease/ATP-binding protein MsbA n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 265..452
e-value: 4.3E-19
score: 79.4
IPR011917ABC transporter, lipid A-core flippase, MsbATIGRFAMTIGR02203TIGR02203coord: 1..477
e-value: 1.9E-204
score: 678.3
IPR003439ABC transporter-like, ATP-binding domainPFAMPF00005ABC_trancoord: 256..406
e-value: 4.4E-33
score: 114.7
IPR003439ABC transporter-like, ATP-binding domainPROSITEPS50893ABC_TRANSPORTER_2coord: 239..475
score: 24.129751
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 1..195
e-value: 2.4E-40
score: 138.9
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 1..207
score: 42.53812
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 237..482
e-value: 4.3E-148
score: 496.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 229..477
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10ABC transporter type 1, transmembrane domaincoord: 2..236
e-value: 4.3E-148
score: 496.8
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 1..224
IPR039421Type 1 protein exporterPANTHERPTHR24221ATP-BINDING CASSETTE SUB-FAMILY Bcoord: 1..475
NoneNo IPR availablePANTHERPTHR24221:SF188LIPID A EXPORT ATP-BINDING/PERMEASE PROTEIN MSBAcoord: 1..475
NoneNo IPR availableCDDcd18552ABC_6TM_MsbA_likecoord: 1..215
e-value: 5.16895E-91
score: 277.381
IPR017871ABC transporter-like, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 378..392

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6164contigP-wetherbeei_contig6164:61..1524 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6164.1.1mRNA_P-wetherbeei_contig6164.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6164 1..2630 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6164.1.1 ID=prot_P-wetherbeei_contig6164.1.1|Name=mRNA_P-wetherbeei_contig6164.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=488bp
MFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAV
IGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNL
SHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVP
VTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTE
LSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYAT
RNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLD
GNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAA
AEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLI
LDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLER
GEIVESGRHVDLLAAGGTYARLYTTQYAAQEARPAAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR011917ABC_transpr_lipidA
IPR003439ABC_transporter-like_ATP-bd
IPR011527ABC1_TM_dom
IPR027417P-loop_NTPase
IPR036640ABC1_TM_sf
IPR039421Type_1_exporter
IPR017871ABC_transporter-like_CS