prot_P-wetherbeei_contig6142.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig6142.1.1
Unique Name	prot_P-wetherbeei_contig6142.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	680

Homology

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BLAST of mRNA_P-wetherbeei_contig6142.1.1 vs. uniprot
Match: FFT2_SCHPO (ATP-dependent helicase fft2 n=1 Tax=Schizosaccharomyces pombe (strain 972 / ATCC 24843) TaxID=284812 RepID=FFT2_SCHPO)

HSP 1 Score: 70.1 bits (170), Expect = 1.220e-8
Identity = 40/82 (48.78%), Postives = 53/82 (64.63%), Query Frame = 0

Query:  602 VQHGALNL---ECVGDAASDDDGGLAVVTAADVTEACDSLVELNSYQLAGVNWMHVLYHLEVNGVLADEMGLGKTVQTIAFF 680
            + +G LN+   E V   A+D+      VT    T A D  V+L SYQL GVNW+H+LY  +++G+LADEMGLGKT Q +AFF
Sbjct:  510 MSNGELNIVDMESVPTEAADNSDFPKFVTEQPKTLASD--VQLKSYQLVGVNWLHLLYQQKLSGILADEMGLGKTCQVVAFF 589

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BLAST of mRNA_P-wetherbeei_contig6142.1.1 vs. uniprot
Match: A0A7I8VYE9_9ANNE (DgyrCDS9150 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VYE9_9ANNE)

HSP 1 Score: 63.9 bits (154), Expect = 8.820e-7
Identity = 28/50 (56.00%), Postives = 40/50 (80.00%), Query Frame = 0

Query:  630 DVTEACDSLVELNSYQLAGVNWMHVLYHLEVNGVLADEMGLGKTVQTIAF 679
            D+ +  +  ++L  YQ+AG+NW+ +LY  ++NG+LADEMGLGKTVQTIAF
Sbjct:  385 DLPKYLNHTLKLAPYQMAGLNWLALLYKNKINGILADEMGLGKTVQTIAF 434

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BLAST of mRNA_P-wetherbeei_contig6142.1.1 vs. uniprot
Match: A0A1V9YP31_9STRA (ATP-dependent helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YP31_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.150e-6
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 0

Query:  620 DGGLAVVTAADVTEACDSLVELNSYQLAGVNWMHVLYHLEVNGVLADEMGLGKTVQTIAF 679
            D G+  V   D+     +L EL  YQ+ GVNW+++LY  +++ VLADEMGLGKTVQTIAF
Sbjct:  324 DAGVQFVQTRDIPGLSPTL-ELQPYQVVGVNWLYLLYQHKMSAVLADEMGLGKTVQTIAF 382

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BLAST of mRNA_P-wetherbeei_contig6142.1.1 vs. uniprot
Match: A0A5J5EL35_9PEZI (SNF2 family N-terminal domain-containing protein n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5EL35_9PEZI)

HSP 1 Score: 60.8 bits (146), Expect = 8.380e-6
Identity = 26/42 (61.90%), Postives = 35/42 (83.33%), Query Frame = 0

Query:  639 VELNSYQLAGVNWMHVLYHLEVNGVLADEMGLGKTVQTIAFF 680
            VEL  YQLAG+NW+++LY  +++ +LADEMGLGKT Q I+FF
Sbjct:  582 VELKDYQLAGLNWLNLLYEKKLSCILADEMGLGKTCQVISFF 623

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BLAST of mRNA_P-wetherbeei_contig6142.1.1 vs. uniprot
Match: A0A0C3QJE8_9AGAM (Uncharacterized protein n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3QJE8_9AGAM)

HSP 1 Score: 59.3 bits (142), Expect = 2.300e-5
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 0

Query:  641 LNSYQLAGVNWMHVLYHLEVNGVLADEMGLGKTVQTIAF 679
            L  YQLAGV W+ +LY   +NG+LADEMGLGKT+QTI+F
Sbjct:  152 LRDYQLAGVQWLALLYENGLNGILADEMGLGKTLQTISF 190

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BLAST of mRNA_P-wetherbeei_contig6142.1.1 vs. uniprot
Match: A0A177TI12_9BASI (Uncharacterized protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177TI12_9BASI)

HSP 1 Score: 59.3 bits (142), Expect = 2.580e-5
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 0

Query:  639 VELNSYQLAGVNWMHVLYHLEVNGVLADEMGLGKTVQTIAFF 680
            V L +YQLAG+NW+ +LY  + + +LADEMGLGKTVQ I+FF
Sbjct:  722 VVLKNYQLAGLNWLSLLYERKTSCILADEMGLGKTVQVISFF 763

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BLAST of mRNA_P-wetherbeei_contig6142.1.1 vs. uniprot
Match: A0A177VYK8_9BASI (Uncharacterized protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VYK8_9BASI)

HSP 1 Score: 59.3 bits (142), Expect = 2.590e-5
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 0

Query:  639 VELNSYQLAGVNWMHVLYHLEVNGVLADEMGLGKTVQTIAFF 680
            V L +YQLAG+NW+ +LY  + + +LADEMGLGKTVQ I+FF
Sbjct:  746 VVLKNYQLAGLNWLSLLYERKTSCILADEMGLGKTVQVISFF 787

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BLAST of mRNA_P-wetherbeei_contig6142.1.1 vs. uniprot
Match: U4L3K7_PYROM (Similar to Uncharacterized ATP-dependent helicase fft2 acc. no. O74842 n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4L3K7_PYROM)

HSP 1 Score: 58.9 bits (141), Expect = 3.260e-5
Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 0

Query:  639 VELNSYQLAGVNWMHVLYHLEVNGVLADEMGLGKTVQTIAFF 680
            V L  YQLAG+NW+++LY  +++ +LADEMGLGKT Q I+FF
Sbjct:  551 VVLKDYQLAGINWLNLLYEKKLSCILADEMGLGKTCQVISFF 592

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BLAST of mRNA_P-wetherbeei_contig6142.1.1 vs. uniprot
Match: UPI001D8CF743 (SNF2 family N-terminal domain-containing protein n=1 Tax=Microdochium trichocladiopsis TaxID=1682393 RepID=UPI001D8CF743)

HSP 1 Score: 58.9 bits (141), Expect = 3.300e-5
Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 0

Query:  638 LVELNSYQLAGVNWMHVLYHLEVNGVLADEMGLGKTVQTIAF 679
            +V+L SYQL G+NWMH+L+    +G+LAD+MGLGKT Q I+F
Sbjct:  589 VVKLKSYQLLGLNWMHLLHQNGFSGILADDMGLGKTCQVISF 630

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BLAST of mRNA_P-wetherbeei_contig6142.1.1 vs. uniprot
Match: UPI0003F0B235 (lymphoid-specific helicase n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0B235)

HSP 1 Score: 58.5 bits (140), Expect = 4.020e-5
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0

Query:  641 LNSYQLAGVNWMHVLYHLEVNGVLADEMGLGKTVQTIAFF 680
            L  YQ+AG+ W+ VL+   VNG+LADEMGLGKTVQ IA F
Sbjct:  264 LRDYQIAGMEWLKVLFENGVNGILADEMGLGKTVQCIALF 303

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig6142.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig6142.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
FFT2_SCHPO	1.220e-8	48.78	ATP-dependent helicase fft2 n=1 Tax=Schizosaccharo...	[more]
A0A7I8VYE9_9ANNE	8.820e-7	56.00	DgyrCDS9150 n=1 Tax=Dimorphilus gyrociliatus TaxID...	[more]
A0A1V9YP31_9STRA	1.150e-6	53.33	ATP-dependent helicase n=1 Tax=Achlya hypogyna Tax...	[more]
A0A5J5EL35_9PEZI	8.380e-6	61.90	SNF2 family N-terminal domain-containing protein n...	[more]
A0A0C3QJE8_9AGAM	2.300e-5	66.67	Uncharacterized protein n=1 Tax=Tulasnella calospo...	[more]
A0A177TI12_9BASI	2.580e-5	61.90	Uncharacterized protein n=2 Tax=Tilletia TaxID=132...	[more]
A0A177VYK8_9BASI	2.590e-5	61.90	Uncharacterized protein n=2 Tax=Tilletia TaxID=132...	[more]
U4L3K7_PYROM	3.260e-5	59.52	Similar to Uncharacterized ATP-dependent helicase ...	[more]
UPI001D8CF743	3.300e-5	59.52	SNF2 family N-terminal domain-containing protein n...	[more]
UPI0003F0B235	4.020e-5	65.00	lymphoid-specific helicase n=1 Tax=Saccoglossus ko...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 482..502
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 464..489
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 418..489
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 349..377
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..110
None	No IPR available	PANTHER	PTHR10799	SNF2/RAD54 HELICASE FAMILY	coord: 442..680
None	No IPR available	PANTHER	PTHR10799:SF854	ATP-DEPENDENT HELICASE BRM	coord: 442..680
IPR038718	SNF2-like, N-terminal domain superfamily	GENE3D	3.40.50.10810		coord: 624..680 e-value: 8.5E-16 score: 59.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 639..679

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig6142	contig	P-wetherbeei_contig6142:602..3008 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig6142.1.1	mRNA_P-wetherbeei_contig6142.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig6142 2..3008 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig6142.1.1 ID=prot_P-wetherbeei_contig6142.1.1|Name=mRNA_P-wetherbeei_contig6142.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=680bp
MVLPKVAAPPASGWLEKRQPLAMTEMERRCNIEVAKQQKKAFRAGMGGQA
PSSKQPGGKKGGGGGGGRKVRGGGGASKRKRKQEWESDDGEEDGDYYGES
SEEDEDNNDNDFGSNGGGSRAKRTKVTGSEKTVRNGKGRGVKGKMGKEGA
AASGASKKRKAQRRAASGSGESDEDSFDESAEESDHSIDLLNDDDEDSNG
GGSGGGRDDTGAGAGGREGGGGTSGSGHSGAAGQNGSEKERGWLVSAGSA
ASAAAASAAATASPSSNSPLTPVGRGLIDGAVAAGTSLAFTADSEIAWAF
GGSLDVPIGPPLKRTAATAPLNQFALTMRRPVPVPALAPAPAPVVAADAV
ASAPPRKRRQVIEDSDDDGDESGTFAAALRNAAAAARAARPGESESIDLT
NEGAAELLDLARGADALPASKSDGVRDAKSESSSWPENGKGGRKAIAVES
ESDDEEEADSEGSDNDDKGGRRYGGGSSDGEEDALEAQAREVLDNCTRLS
ERLMACMARWAAPTPPPAALPPLSASPGAVSKGGCGGGGDGIGGAGDDGS
TGSCAAGNGETGGGDAEQATLAAAAAGSIAGGDGGGAAAAPVAAAAGAAA
VVQHGALNLECVGDAASDDDGGLAVVTAADVTEACDSLVELNSYQLAGVN
WMHVLYHLEVNGVLADEMGLGKTVQTIAFF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR038718	SNF2-like_sf
IPR027417	P-loop_NTPase