mRNA_P-wetherbeei_contig6125.3.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6125.3.3
Unique NamemRNA_P-wetherbeei_contig6125.3.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6125.3.3 vs. uniprot
Match: A0A6P5SHZ7_PRUAV (protein FAR1-RELATED SEQUENCE 6-like n=1 Tax=Prunus avium TaxID=42229 RepID=A0A6P5SHZ7_PRUAV)

HSP 1 Score: 134 bits (336), Expect = 1.730e-30
Identity = 124/417 (29.74%), Postives = 182/417 (43.65%), Query Frame = 2
Query:  254 KMCLPVAGIDATFMKNNEYNGQMLLLVMRDGALRNVVVAAALVDKETEANYTWFFQQVKHGEGMSDLLNNS--KMLFISDRNQGLMNAIDSHFPDASRRHCLAHLARNIKDRPGGSTGLGPGQGLFWSLARSTNVTEWNANWQLLQTARPD----LAAYLAEADFYKWSLLHLMEKGVTGFGVDTSNFVESSNAAFRGLRELQPPAWLETISTYLATERYERRAEAETWREESHIITPPVMDRYWKQAKMASAYKVERLGVDLAKVEHNGTDRFAHQRQVRLDVQQCTCTDWEQLGYPCRHAVAFAKLAGGGDRLSSAEWFRDSRVFSPTFLVDTVIEAYCIEVVLPLRD-DVVPPEGAA---LLPPLRVKPAGRPRKKRIRSRGEGGGDGAAKRVFHCGRCRNTG-HTARTCTNPV 1471
            K C P   +D TF+KN +Y G +L    ++G      +A A+VD E EAN+TWF       E +S++L +    + FI DR +GL+ A+ + FP+++   CL HL  N+  R   S G      + W  +         A    ++  + D    +  +L       WS +    K    +G   SN VE  N+     REL     L+ + T +  +   RR   E W   +  + P V  +  K  +    + V R   +L +V+   +  FA    + L    C+C  W+  G+PC HA+  A LA  GD     E         P F  D     Y I +  P+ D +   PEG     + PPL  KP GRPR KRI+SRGE       K+ + C RC   G H  RTC   +
Sbjct:  106 KFCRPFLCLDGTFVKN-KYKGHLLAATGKNGNQGFFPLAFAIVDSENEANWTWFL------ENLSEVLTDQGRNITFIFDRCKGLIEAVSNVFPESNHFFCLHHLKHNVLARYPSSMGKLYQDWIVWCFSSCAYAPTEGAFEHHVKKLKKDGGDTILEFLDTIPKENWSNVFFPGKK---YGEMCSNLVECFNSWILVERELPIYQLLDRLWTKMMVKYAARRRAVEKW---TTYLCPKVEKQLQKSIETGRHWDVNRSSDNLFEVQAGYS--FA----IDLHQHTCSCCQWQIKGFPCDHAIT-AILADHGDPYEYIE---------PYFTTDYYRSCYGIPIA-PVPDIEKEAPEGLEDFRVKPPLTRKPPGRPRTKRIKSRGE------EKKCYKCSRCGQGGQHNWRTCNAQI 486          
BLAST of mRNA_P-wetherbeei_contig6125.3.3 vs. uniprot
Match: UPI000C1D0B57 (uncharacterized protein LOC111370091 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D0B57)

HSP 1 Score: 132 bits (331), Expect = 6.650e-30
Identity = 121/405 (29.88%), Postives = 190/405 (46.91%), Query Frame = 2
Query:  269 VAGIDATFMKNNEYNGQMLLLVMRDGALRNVVVAAALVDKETEANYTWFFQQVKHGEGMSDLLNNSKMLFISDRNQGLMNAIDSHFPDASRRHCLAHLARNIKDRPGGSTGLGPGQGLFWSLARSTNVTEWNANWQLLQTARPDLAAYLAEADFYK-WSLLHLMEKGVTGFGVDTSNFVESSNAAFRGLRELQPPAWLETISTYLATERYERRAEAETWREESHIITPPVMDRYWKQAKMASAYKVERLGVDLAKVE-HNGTDRFAHQRQVRLDVQQCTCTDWEQLGYPCRHAVAFAKLAGGGDRLSSAEWFRDSRVFSPTFLVDTVIEAY--CIEVVLPLRDDVVPPEGAALLPPLRVKPAGRPRKKRIRSRGEGGGDGAAKRVFHCGRCRNTGHTARTCTNPV 1471
            V  +D  FMK+ ++ G +L+   +D  L+   +A  +VD E  A++TWFF ++ H  GM + L     +FISD  +G+ NAI   +P A    C+ HL  NIK     +  L     LF + A+  ++  +  +   L    P +  YL +   Y+ WS  H   KG+  + + T+N  ES N+ F+  RE    A +E I   L    YER  EAE   E +  +TPP+ D+  K+   A    V    V + + E H G +   +   V L+ + C+C +++    P +HA+A AK  G    +S         + S  ++  +  +AY  CI  V    D  +  +   L P    + +GRP+ +RI SRGEG      ++   C RC   GH   TC N +
Sbjct:  102 VISVDRIFMKS-KFRGTLLVATCQDANLQIYPLAFGIVDSENNASWTWFFDKLFHVMGMLEGL-----VFISDCKEGIGNAIKIVYPYAHHGCCMWHLQLNIKSNYHKADILP----LFMATAKEYSLINFEKSMANLYCKSPAVGQYLEKKVGYEFWSRAHF--KGIR-YNIMTTNNAESLNSLFKNAREFPVLAMVEQIRKTLQKWFYERHIEAE---ECATTLTPPIEDKMRKKYNDAKGLIV----VPINEYELHVGVENEMY--IVNLEARTCSCREFDLKKLPYKHALAVAKFKG----ISCCS------LCSLYYISASWKQAYAECIYPVTNEADWEISNQPKVLPPLSNRRQSGRPKNRRIPSRGEG------RKTRKCSRCGQRGHNRLTCKNTL 468          
BLAST of mRNA_P-wetherbeei_contig6125.3.3 vs. uniprot
Match: R0HSV9_9BRAS (SWIM-type domain-containing protein n=1 Tax=Capsella rubella TaxID=81985 RepID=R0HSV9_9BRAS)

HSP 1 Score: 134 bits (336), Expect = 1.020e-29
Identity = 120/428 (28.04%), Postives = 188/428 (43.93%), Query Frame = 2
Query:  230 FGCS*QIAKMCLPVAGIDATFMKNNEYNGQMLLLVMRDGALRNVVVAAALVDKETEANYTWFFQQVKHGEGMSDLLNNSKMLFISDRNQGLMNAIDSHFPDASRRHCLAHLARNIKDRPGGSTGLGPGQGLFWSLARSTNVTEWNANWQLLQTARPDLAAYLAEADFYKWSLLHLMEKGVTGFGVDTSNFVESSNAAFRGLRELQPPAWLETISTYLATERYERRAEAETWREESHIITPPVMDRYWKQAKMASAYKVERLGVDLAKVEHNGTDRFAHQRQVRLDVQQCTCTDWEQLGYPCRHAVAFAKLAGGGDRLSSAEWFRDSRVFSPTFLVDTVIEAYCIE--------VVLPL---RDDVVPPE--GAALLPPLRVKPAGRPRKKRIRSRGEGGGDGAAKR-VFHCGRCRNTGHTARTCTNPV 1471
            FG     +     V  IDAT +K  ++ G +L    +DG  + + V   +VD E E  ++WFF+Q+      + + +++ ++F+SDR+  +  A+   +P A    C  HL RN+K       GLG    L    A +  V E+   +  ++   P  A YL       W+ ++   K    + + +SN  ES NAA     E    + +E+I   L    Y RR +A   R     +TP V +   +    ++   V+     + +V  +    F     V ++ + C+C  ++ LG PC HA+A  ++                   + T +VD V E Y IE        V++P     ++ VP E   +  LPP    P GRPRKKRI SRGE  G    +R    C RC  TGH   TC NP+
Sbjct:  381 FGACIHASHFMRKVVIIDATTIKA-KFKGCLLTASFQDGNFQIMPVGFGVVDGENEPAWSWFFKQLA-----TIIPDDADLVFVSDRHNSIYAALRKVYPLAKHGACSVHLYRNVKSIYARQKGLGY---LVAKAAAAYTVGEFRNKFDEIERRSPACANYLRGIGMSHWTRVYFQGKR---YNIMSSNVAESLNAALAKSLEFPIVSMVESIRMMLMRWFYCRREKANKHRSP---VTPEVEELLMRNLSESAELTVKPASFSIYQVNSSDGAGFT----VDIERKTCSCKVFDTLGIPCSHALAAGRV-------------------NRTPIVDMVEEYYKIEGLRSGYSCVIMPAPTAENEDVPEELVNSEKLPPQSSAPPGRPRKKRILSRGESSGKRTRQRSAGRCSRCFGTGHNRATCKNPI 770          
BLAST of mRNA_P-wetherbeei_contig6125.3.3 vs. uniprot
Match: UPI00064E10FD (uncharacterized protein LOC105953518 n=2 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064E10FD)

HSP 1 Score: 132 bits (332), Expect = 3.010e-29
Identity = 115/416 (27.64%), Postives = 180/416 (43.27%), Query Frame = 2
Query:  254 KMCLPVAGIDATFMKNNEYNGQMLLLVMRDGALRNVVVAAALVDKETEANYTWFFQQVKHGEGMSDLLNNSKMLFISDRNQGLMNAIDSHFPDASRRHCLAHLARNIKDRPGGSTGLGPGQGLFWSLARSTNVTEWNANWQLLQTARPDLAA--------YLAEADFYKWSLLHLMEKGVTGFGVDTSNFVESSNAAFRGLRELQPPAWLETISTYLATERYERRAEAETWREESHIITPPVMDRYWKQAKMASAYKVERLGVDLAKVEHNGTDRFAHQRQVRLDVQQCTCTDWEQLGYPCRHAVAFAKLAGGGDRLSSAEWFRDSRVFSPTFLVDTVIEAYCIEVVLPLRDDVVPPEGAALLPPLRVKPAGRPRKKRIRSRGEGGGDGAAKRVFHCGRCRNTGH-TARTCTNPVG 1474
            K C PV  +D TF+K  ++ G +L  V +DG       A A+V++ET AN+ WF + ++   G   +L      FISDR  G++  + + FP +    C+ HL RN+K+        G G  L  ++    +   + A+ +  + A  DL +        +LA+  +  W+  +  E G   +G  TSN VES NA  R  R L    +++ I + L  +   R  E +TW          ++D +  + +  +  K      ++  V +   D         +  + C+C  W+  GYPC HA A   L          E+F  S +F  T+ +          ++ P    VV  +   + PP      GRPR KRI SRGE        R   CGRC   GH   +TCT  +G
Sbjct:  350 KSCRPVVCVDGTFLKG-KHKGILLSAVAKDGNDGLFPFAFAIVNEETNANWAWFLEHLRDSVGTERVLT-----FISDRCHGIVEGVKNIFPGSRHAFCVIHLKRNLKNHF-----RGVGANLRKAIVLQFDSCVYAASKEEFEVAMGDLRSNGAERIFNFLADLPYENWAHSYF-EAG--RYGQSTSNAVESWNAQIRRYRHLPITNFIDAIRSLLMVQMCIRHEEGDTWTTAICPNLETIVDSFVNEGRPLTVKKASEFVYEVYSVPNAVVD---------VQARTCSCRWWQINGYPCVHAAAVLFLYRNDGYEHIDEYFHVS-MFKSTYAM----------LIQPFGKVVVDNQQKLVGPPDYHTRRGRPRVKRIPSRGE-----HIARKMKCGRCNEYGHHNKKTCTKRIG 726          
BLAST of mRNA_P-wetherbeei_contig6125.3.3 vs. uniprot
Match: UPI000C1D4526 (uncharacterized protein LOC111374649 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D4526)

HSP 1 Score: 126 bits (317), Expect = 8.880e-29
Identity = 116/388 (29.90%), Postives = 179/388 (46.13%), Query Frame = 2
Query:  320 MLLLVMRDGALRNVVVAAALVDKETEANYTWFFQQVKHGEGMSDLLNNSKMLFISDRNQGLMNAIDSHFPDASRRHCLAHLARNIKDRPGGSTGLGPGQGLFWSLARSTNVTEWNANWQLLQTARPDLAAYLAEADFYK-WSLLHLMEKGVTGFGVDTSNFVESSNAAFRGLRELQPPAWLETISTYLATERYERRAEAETWREESHIITPPVMDRYWKQAKMASAYKVERLGVDLAKVE-HNGTDRFAHQRQVRLDVQQCTCTDWEQLGYPCRHAVAFAKLAGGGDRLSSAEWFRDSRVFSPTFLVDTVIEAY--CIEVVLPLRDDVVPPEGAALLPPLRVKPAGRPRKKRIRSRGEGGGDGAAKRVFHCGRCRNTGHTARTCTNPV 1471
            +L+   +D  L+   +A  +VD E +A++TWFF ++ H  GM + L     +FISDR + + NAI   +P A    C+ HL  NIK        + P   LF + A+  ++  +  +   L    P +  YL +   Y+ WS  H   KG+  + + T+N  ES N+ F+  RE    A +E I   L    +ER  EAE   E +  +TPP+ D+  K+   A    V    V + + E H   +   +   V L+ + C+  +++    PC+HA+A AK  G             + + SP +   +  +AY  CI  V    D  +  +   L P L    +GRP+ +RI SRGEG      KR   C RC   GH   TC N +
Sbjct:    2 LLVATCQDANLQIYPLAFGIVDSENDASWTWFFDKLFHVTGMLEGL-----VFISDRKESIGNAIKIVYPYAHHGCCMWHLQLNIKSNYH-KIDILP---LFMATAKEYSLINFEKSMANLYRKSPAVGQYLEKKVGYEFWSRAHF--KGIR-YNIMTTNNAESLNSLFKNAREFPVLAMVEQIRKTLQKWFHERHIEAE---ECASTLTPPIEDKMRKKYNDAKGLIV----VPINEYELHVSVENEMY--TVNLEARTCSYREFDLEKLPCKHALAAAKFKG----------ISCNNLCSPYYTSASWKQAYAECIYPVANEADWEISNQPKVLPPLLNRGQSGRPKNRRIPSRGEG------KRTRKCSRCGQRGHNRLTCKNAL 352          
BLAST of mRNA_P-wetherbeei_contig6125.3.3 vs. uniprot
Match: UPI001036E685 (uncharacterized protein LOC114267171 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI001036E685)

HSP 1 Score: 129 bits (324), Expect = 1.690e-28
Identity = 113/414 (27.29%), Postives = 188/414 (45.41%), Query Frame = 2
Query:  260 CLPVAGIDATFMKNNEYNGQMLLLVMRDGALRNVVVAAALVDKETEANYTWFFQQVKHGEGMSDLLNNSKML-FISDRNQGLMNAIDSHFPDASRRHCLAHLARNIKD--RPGGSTGLGPGQGLFWSLARSTNVTEWNANWQLLQTARPDLA-AYLAEADFYKWSLLHLMEKGVTGFGVDTSNFVESSNAAFRGLRELQPPAWLETISTYLATERYERRAEAETWREESHIITPPVMDRYWKQAKMASAYKVERLGVDLAKVEHNGTDRFAHQRQVRLDV--QQCTCTDWEQLGYPCRHAVAFAKLAGGGDRLSSAEWFRDSRVFSPTFLVDTVIEAYCIEVVLPLRDDVVPP---EGAALLPPLRVKPAGRPRKKRIRSRGEGGGDGAAKRVFHCGRCRNTG-HTARTCTNPV 1471
            C P+  +D TF+K  ++ G +L    +DG      +A A+VD E   N+ WF         +++++N+ + L F+SDR+ GL+ +I + F  A    CL HL RN++D  R   S+        F S A +  V  +N   +    A P  A A+L +     W+  H   +G   +G  +SN VES N+  R  R L     L++I T +  +  +RR +A++W     ++ P + D+  K      ++ + +   ++ +V    +        V +DV  + C+C  W+  G+PC HAV   + +G               V  P + V     +Y   +  P+     PP   E   + PP   +P GRP+KKR+ SRG+        +   C RC+  G H  +TC  P+
Sbjct:  204 CRPMLFLDGTFLKG-KFKGNLLATTAKDGNQGLFPLAIAIVDSENTTNWAWFLGH------LANVVNSQRELTFLSDRHAGLLESIPAIFRTAHHAFCLEHLQRNLQDKLRYVNSSYRACLLSKFRSCAYAPTVVAFNEKLEEFMKASPKAAPAFLKDLSPQYWANAHF--RGAR-YGEMSSNAVESFNSWIREARHLLITQLLDSIQTKIMRQMSKRRLKAQSW---PGVVCPKMEDQLVKAYNKGRSWLLSQSNNEIFEVHSFPS--------VMVDVGRRTCSCFQWQIKGFPCAHAVVAIRNSG----------LDLYNVVDPYYHVSEYRNSYACNI-HPIPTVEKPPFSIEDYIIQPPAVKRPPGRPKKKRMLSRGK------EVQQIRCSRCQRLGNHNRKTCKKPI 579          
BLAST of mRNA_P-wetherbeei_contig6125.3.3 vs. uniprot
Match: A0A6S7KQM9_LACSI (Uncharacterized protein n=1 Tax=Lactuca saligna TaxID=75948 RepID=A0A6S7KQM9_LACSI)

HSP 1 Score: 129 bits (324), Expect = 3.640e-28
Identity = 113/398 (28.39%), Postives = 174/398 (43.72%), Query Frame = 2
Query:  275 GIDATFMKNNEYNGQMLLLVMRDGALRNVVVAAALVDKETEANYTWFFQQVKHGEGMSDLLNNSKMLFISDRNQGLMNAIDSHFPDASRRHCLAHLARNIKDRPGGSTGLGPGQGLFWSLARSTNVTEWNANWQLLQTARPDLAAYLAEADFYKWSLLHLMEKGVTGFGVDTSNFVESSNAAFRGLRELQPPAWLETISTYLATERYERRAEAETWREESHIITPPVMDRYWKQAKMASAYKVERLGVDLAKVEHNGTDRFAHQRQVRLDVQQCTCTDWEQLGYPCRHAVAFAKLAGGGDRLSSAEWFRDSRVFSPTFLVDTVIEAYCIEVVLPLRDDVVPPEGAA---LLPPLRVKPAGRPRKKRIRSRGEGGGDGAAKRVFHCGRCRNTGHTARTC 1459
            G+D  FMK   Y+G +L  V  DG      +A A+V+ E   ++TWF   +    G   L  NS   FISDR +GL+ A++  FP A  R+CL HL  N+K +  G       +   W  A  T + ++N+  + L+    +   +L       WS  H    G        +N  ES N+     R+    + LE I  Y+  +    + E +   + +  +TP       K  + A+  +    G    +V   GT+++     V +D Q C+C  WE  G PC+H++A    A    RL++           PT+ + T  E Y  +V  P+   ++  +      L+PP    P GRP+KKR RS  E  G     +   C +C N GH  RTC
Sbjct:  371 GLDGAFMKG-PYHGMILTAVGLDGNNCTYPLAYAVVEAENFNSWTWFLTNLGDDLG---LYANSNFTFISDRQKGLLPALEKLFPAAEHRYCLRHLHENMKRKWRGKEF----KDCLWKCATCTTIPQFNSAMEELKKLNSEAYDWLNSIPPKHWSRSHF--SGRAHCDAVLNNMCESLNSKIVKGRDKPIISCLEFIREYIMRKIVMVQKEID---KANGPLTPTATKTLEKIKERAAQCRAVFCGNGKYQVTSEGTNQYV----VNMDQQTCSCNRWELTGIPCKHSIA----AIWDMRLNNENVGIPETWVHPTYWLKTWKEMYVFKVE-PINGRLLWEKSTCPTKLIPPKYRVPIGRPKKKRRRSATEDDGVSTKWKSVTCTKCGNVGHNGRTC 746          
BLAST of mRNA_P-wetherbeei_contig6125.3.3 vs. uniprot
Match: UPI001C691C0D (uncharacterized protein LOC122194883 n=11 Tax=Lactuca sativa TaxID=4236 RepID=UPI001C691C0D)

HSP 1 Score: 129 bits (323), Expect = 6.140e-28
Identity = 118/409 (28.85%), Postives = 175/409 (42.79%), Query Frame = 2
Query:  275 GIDATFMKNNEYNGQMLLLVMRDGALRNVVVAAALVDKETEANYTWFFQQVKHGEGMSDLLNNSKMLFISDRNQGLMNAIDSHFPDASRRHCLAHLARNIKDRPGGSTGLGPGQGLFWSLARSTNVTEWNANWQLLQTARPDLAAYLAEADFYKWSLLHLMEKGVTGFGVDTSNFVESSNAAFRGLRELQPPAWLETISTYLATERYERRAEAETWREESHIITPPVMDRYWKQAKMASAYKVERLGVDLAKVEHNGTDRFAHQRQVRLDVQQCTCTDWEQLGYPCRHAVA--FAKLAGGGDRLSSAEWFRDSRVFSPTFLVDTVIEAYCIEVVLPLRDDVVPPEGAA---LLPPLRVKPAGRPRKKRIRSRGEGGGD-GAAKRVF---HCGRCRNTGHTARTCTNPVG 1474
            G+D TFMK   Y GQ+L  V  D       VA A+V+ E+ +++TWF + +  GE + DL  NS   FISDR +G++ A++  FP A  R CL H+  N+K +  G           W   R+T V  +N     L+    +  A++++     W+  H   +  T   ++  N  E  N+     R+      LE I  YL       + E +       ++TP     + K    AS Y  +  G    +V     D++     V L+   C+C  WE  G+PCRHAV   + K+  G +     EW        P + + T    Y    + PL    + P+      LLPP      GRP+KKR R   E     G   R +    C +C N GH +RTC    G
Sbjct:  672 GLDGTFMKG-PYPGQVLTAVGLDSNNGIYPVAYAVVETESTSSWTWFLELL--GEDL-DLGPNSNFTFISDRQKGIIPAMEKVFPSAEHRFCLRHIQENMKKQWKGKDLSDQ----LWECGRATTVNHFNRAMDELKKINAEAHAWVSKIPANTWAKSHFSGRAHTDCLLN--NLCEVFNSKLDEGRDKPIITCLEYIREYLMKRLCVVQKEIDKC---EGLLTPTATTLFEKIKADASKYVAKYNGAGKYQVASTWQDQYV----VNLNDHSCSCRFWEITGFPCRHAVCAIWDKIENGENAPHVDEWVH------PCYRLSTWKAMY-FNKIDPLNGRTMWPKSDCPFTLLPPKHKTQVGRPKKKRRRGVDEPNSQAGRLSRKYLAVTCSKCHNKGHNSRTCKGQGG 1056          
BLAST of mRNA_P-wetherbeei_contig6125.3.3 vs. uniprot
Match: UPI0012492EB0 (uncharacterized protein LOC115958131 n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI0012492EB0)

HSP 1 Score: 128 bits (322), Expect = 7.800e-28
Identity = 114/407 (28.01%), Postives = 180/407 (44.23%), Query Frame = 2
Query:  260 CLPVAGIDATFMKNNEYNGQMLLLVMRDGALRNVVVAAALVDKETEANYTWFFQQVKHGEGMSDLLNNSKMLFISDRNQGLMNAIDSHFPDASRRHCLAHLARNIKDRPGGSTGLGPGQGLFWSLARSTNVTEWNANWQLLQTARPDLAAYLAEADFYKWSLLHLMEKGVTGFGVDTSNFVESSNAAFRGLRELQPPAWLETISTYLATERYERRAEAETWREESHIITPPVMDRYWKQAKMASAYKVERLGVDLAKVEHNGTDRFAHQRQVRLDVQQCTCTDWEQLGYPCRHAVA--FAKLAGGGDRLSSAEWFRDSRVFSPTFLVDTVIEAYCIEVVLPL--RDDVVPPEGAALLPPLRVKPAGRPRKKRIRSRGEGGGDGAAKRV---FHCGRCRNTGHTARTC 1459
            C P+ G+D   +K   + GQ+L    RDG      VA A+V++E + ++ WF QQ     G  + LN    +FISDR +GL+ AI+  FP    R+C+ H+  N K       GL     L W  A +T + E+    Q L+   P    YLA+ +  +WS  H   + ++      +N  E  N+     R+    A LE I   L T  Y++R   E +      + P + D+  K  + +  +     G  + +V++   DR  H   V L  + C+C  W+  G PC+H +   F  L    D +             P +L +T ++ Y  E++ P+  + + V    AA + P   KP GRP K R ++  E        R+     CG+C   GH +R C
Sbjct:  421 CRPIIGLDGCHLKGR-FGGQILAATARDGNDNIFPVALAVVEQENKDSWVWFLQQFSDDIGNPEQLN---FVFISDRQKGLIPAIEMLFPTVEHRYCVKHIYNNFKVN---HKGLELKDAL-WRCAGATTIKEFEKRMQELKDLDPKAWEYLADINPAQWSKSHFTCRALSD--CLANNLSELFNSMILKARDKPILAMLEWIRVRLMTNLYKKRKGIEKY---VGKVCPNIQDKLEKLKQESIPFCATPSGRFMYEVDN---DRERH--VVNLTNRTCSCRIWDLTGLPCKHGITAIFKNLEKVEDYVH------------PCYLRETYLQTYQ-EIIQPMPGQSEWVQTGHAAPVAPHVYKPPGRPPKLRKKAPDEPRNPYRISRMNKTIKCGKCHKEGHNSRGC 796          
BLAST of mRNA_P-wetherbeei_contig6125.3.3 vs. uniprot
Match: A0A6P5GA16_ANACO (uncharacterized protein LOC109721429 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GA16_ANACO)

HSP 1 Score: 126 bits (317), Expect = 1.110e-27
Identity = 122/409 (29.83%), Postives = 171/409 (41.81%), Query Frame = 2
Query:  260 CLPVAGIDATFMKNNEYNGQMLLLVMRDGALRNVVVAAALVDKETEANYTWFFQQVKHGEGMSDLLNNSKMLFISDRNQGLMNAIDSHFPDASRRHCLAHLARNIKDRPGGSTGLGPGQGLFWSLARSTNVTEWNANWQLLQTARPDLAAYLAEADFYKWSLLHLMEKGVTGFGVD--TSNFVESSNAAFRGLRELQPPAWLETISTYLATERYERRAEAETWREESHIITPPVMDRYWKQAKMASAYKVERLGVDLAKVEHNGTD-RFAHQRQVRLDVQQCTCTDWEQLGYPCRHAVAFAKLAGGGDRLSSAEWFRDSRVFSPTFLVDTVIEAYCIEVV-LPLRDDVVPPE-GAALLPPLRVKPAGRPRKKRIRSRGEGGGDGAAKRVFHCGRCRNTGHTARTCTNPV 1471
            C P   +D   +K  ++ G ++     DG      VA  +V+ E   ++ WF   +K   G  + L     +F SDR +GL  A+   +P    R C+ HL  N K +  G       +   W+ AR+     +  +   +  A P    YL +   Y WS      K  T    D  T+N  ES NA     R       L+TI   +  +  +RR  A  W  E   I P V+      +K    Y+V  L  D    E  G   RF    +VRL   QC+C  W+  G PC HA++         +L   +W        P F V    EAY   +  LP  D  V  + G  +LPP+  +PAGRPR KRIR+  E     A ++   C RC   GH A+TC NPV
Sbjct:   64 CRPYIALDGCHLKG-KHRGVLVSATSIDGNSSIFPVAFGVVESENSNSWEWFLHGLKTAIGDFEGL-----VFSSDRQKGLDEAVQVVYPRVEHRECMRHLYANFKKKFRGDCY----RDSLWAAARAYTPNVYETSIAKVYEANPMAFEYLRQNHSYLWS----RSKFGTIAKCDYLTNNIFESFNAWLSNDRHRPLIDMLDTIRQKIMVKMEDRRNRARKWDSE---IVPTVLKYVNNISKGLGQYEV--LWSDEFSAEVIGPQSRF----EVRLHDMQCSCRLWQVKGVPCIHAMSVI------GKLKHEKW---ENYVHPYFTVAKYKEAYASSIAPLPSCDQWVKIDIGLRVLPPILKRPAGRPRNKRIRASDEM----AIRKRHRCKRCNKLGHRAKTCKNPV 436          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6125.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P5SHZ7_PRUAV1.730e-3029.74protein FAR1-RELATED SEQUENCE 6-like n=1 Tax=Prunu... [more]
UPI000C1D0B576.650e-3029.88uncharacterized protein LOC111370091 n=1 Tax=Olea ... [more]
R0HSV9_9BRAS1.020e-2928.04SWIM-type domain-containing protein n=1 Tax=Capsel... [more]
UPI00064E10FD3.010e-2927.64uncharacterized protein LOC105953518 n=2 Tax=Eryth... [more]
UPI000C1D45268.880e-2929.90uncharacterized protein LOC111374649 n=2 Tax=Olea ... [more]
UPI001036E6851.690e-2827.29uncharacterized protein LOC114267171 n=1 Tax=Camel... [more]
A0A6S7KQM9_LACSI3.640e-2828.39Uncharacterized protein n=1 Tax=Lactuca saligna Ta... [more]
UPI001C691C0D6.140e-2828.85uncharacterized protein LOC122194883 n=11 Tax=Lact... [more]
UPI0012492EB07.800e-2828.01uncharacterized protein LOC115958131 n=1 Tax=Querc... [more]
A0A6P5GA16_ANACO1.110e-2729.83uncharacterized protein LOC109721429 n=2 Tax=Anana... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6125contigP-wetherbeei_contig6125:843..2603 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog3659.XP_004139616.1
PFAMsDBD_Tnp_Mut,MULE,SWIM
Model size1480
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.35e-34
EggNOG OGs29CIJ@1|root,2RJNC@2759|Eukaryota,37THD@33090|Viridiplantae,3GEBB@35493|Streptophyta,4JTMA@91835|fabids
DescriptionMULE transposase domain
Cds size1224
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186890.2396467-CDS-P-wetherbeei_contig6125:842..16241683186890.2396467-CDS-P-wetherbeei_contig6125:842..1624Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6125 843..1624 -
1683186890.2500288-CDS-P-wetherbeei_contig6125:1905..23471683186890.2500288-CDS-P-wetherbeei_contig6125:1905..2347Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6125 1906..2347 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186890.2652392-UTR-P-wetherbeei_contig6125:2347..26031683186890.2652392-UTR-P-wetherbeei_contig6125:2347..2603Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6125 2348..2603 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6125.3.3prot_P-wetherbeei_contig6125.3.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6125 843..2347 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6125.3.3

>prot_P-wetherbeei_contig6125.3.3 ID=prot_P-wetherbeei_contig6125.3.3|Name=mRNA_P-wetherbeei_contig6125.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=408bp
MCLPVAGIDATFMKNNEYNGQMLLLVMRDGALRNVVVAAALVDKETEANY
TWFFQQVKHGEGMSDLLNNSKMLFISDRNQGLMNAIDSHFPDASRRHCLA
HLARNIKDRPGGSTGLGPGQGLFWSLARSTNVTEWNANWQLLQTARPDLA
AYLAEADFYKWSLLHLMEKGVTGFGVDTSNFVESSNAAFRGLRELQPPAW
LETISTYLATERYERRAEAETWREESHIITPPVMDRYWKQAKMASAYKVE
RLGVDLAKVEHNGTDRFAHQRQVRLDVQQCTCTDWEQLGYPCRHAVAFAK
LAGGGDRLSSAEWFRDSRVFSPTFLVDTVIEAYCIEVVLPLRDDVVPPEG
AALLPPLRVKPAGRPRKKRIRSRGEGGGDGAAKRVFHCGRCRNTGHTART
CTNPVGG*
back to top

mRNA from alignment at P-wetherbeei_contig6125:843..2603-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6125.3.3 ID=mRNA_P-wetherbeei_contig6125.3.3|Name=mRNA_P-wetherbeei_contig6125.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1761bp|location=Sequence derived from alignment at P-wetherbeei_contig6125:843..2603- (Phaeothamnion wetherbeei SAG_119_79)
ATACCCCGTCGTCGTCAGCGAAGACCTGCCGCCGGTCATCAAGGATCGCT TCGAGAGGGCGTTCGTGATGCTGCACTCGTCGCAAGAGGTGAGTGAGGCG GCAGGAGTTGAATGCACCATGTCTGCCCGTTCTCCTCCCGTCTGGTGCTC CTAGCTCTCGTCCTTCTTTTTTCGTGAACTCTGAAGGCGCCTGTTTCGGC CCTTTCCAACGCTGCCTGCCACGCCGCCTTTTGGCTGCTCTTGACAGATC GCCAAGATGTGCTTGCCGGTTGCGGGCATTGACGCCACGTTCATGAAGAA CAACGAGTACAACGGGCAGATGCTGCTTCTTGTCATGCGCGACGGCGCTC TTCGCAACGTTGTCGTGGCCGCAGCTCTGGTGGACAAGGAGACGGAGGCC AACTACACCTGGTTTTTCCAGCAAGTGAAGCACGGCGAAGGCATGAGCGA CCTGCTCAACAACTCCAAGATGCTCTTCATCTCGGATCGCAACCAGGGAC TCATGAACGCCATCGACTCGCACTTCCCCGACGCATCCCGTCGTCATTGC CTGGCGCATTTGGCGCGCAACATCAAGGATCGGCCAGGCGGCAGCACGGG GCTCGGCCCCGGCCAAGGTCTCTTCTGGAGCCTCGCTCGTTCGACCAACG TGACCGAATGGAATGCGAACTGGCAGCTTCTGCAGACGGCCCGCCCAGGT GAGATGCTCACCATTTTTTCCTACTCGTTTTTTACTAAGTTCATTGCTGG CTGTTGGTGGGGGAAGCCGACCCAGGCCTGCTGTCGCTCTATCATTAGCC GACTACTACTATTTGCATGGAGAGCATGCCCCTGCGTTTTCCTGTGTGCC TGGAGGCTGGGGGGCGGTCGCTCTGTTGGCGCTGCTCCTTGCGCCCATGT TCTAGCGGCGGCGGCCGTCTCGACAAGGACCGCCCTTGACCTTCCGTGCC TGGTCCGCCCGGTCTTTCTGTCTGCGCAGACCTCGCCGCCTACTTGGCGG AGGCGGACTTCTACAAGTGGTCGCTGCTGCATCTCATGGAGAAAGGCGTG ACAGGCTTCGGCGTCGACACGTCCAACTTCGTTGAGAGCTCCAATGCAGC CTTCCGTGGCCTCCGTGAGCTGCAGCCGCCCGCGTGGCTCGAGACCATCA GCACGTATCTCGCGACGGAGCGGTACGAGCGCCGCGCCGAGGCCGAGACT TGGCGGGAGGAGTCGCACATCATCACGCCGCCGGTGATGGATCGGTACTG GAAGCAGGCCAAGATGGCGAGCGCCTACAAAGTGGAGCGCCTTGGGGTCG ACCTGGCCAAGGTGGAGCACAACGGCACTGATAGGTTCGCACACCAGCGC CAAGTTCGTCTCGATGTGCAGCAGTGTACGTGCACGGACTGGGAGCAGCT GGGCTACCCGTGCCGCCACGCCGTCGCCTTTGCCAAGTTAGCAGGCGGCG GCGACCGGCTGAGCAGCGCGGAATGGTTCCGCGACAGCAGGGTTTTCAGC CCCACTTTTCTGGTGGATACGGTTATAGAGGCTTACTGCATTGAGGTTGT CTTGCCGCTCCGCGACGACGTTGTGCCGCCCGAGGGGGCGGCACTTCTTC CGCCGCTGCGGGTGAAGCCGGCCGGGCGTCCGCGCAAGAAGCGGATCCGC AGCCGGGGGGAGGGCGGTGGGGATGGCGCTGCTAAACGTGTCTTTCACTG CGGCCGGTGCCGCAACACCGGCCACACGGCTCGCACTTGCACGAATCCCG TTGGCGGCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6125:843..2603-

>mRNA_P-wetherbeei_contig6125.3.3 ID=mRNA_P-wetherbeei_contig6125.3.3|Name=mRNA_P-wetherbeei_contig6125.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1224bp|location=Sequence derived from alignment at P-wetherbeei_contig6125:843..2603- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGCTTGCCGGTTGCGGGCATTGACGCCACGTTCATGAAGAACAACGA
GTACAACGGGCAGATGCTGCTTCTTGTCATGCGCGACGGCGCTCTTCGCA
ACGTTGTCGTGGCCGCAGCTCTGGTGGACAAGGAGACGGAGGCCAACTAC
ACCTGGTTTTTCCAGCAAGTGAAGCACGGCGAAGGCATGAGCGACCTGCT
CAACAACTCCAAGATGCTCTTCATCTCGGATCGCAACCAGGGACTCATGA
ACGCCATCGACTCGCACTTCCCCGACGCATCCCGTCGTCATTGCCTGGCG
CATTTGGCGCGCAACATCAAGGATCGGCCAGGCGGCAGCACGGGGCTCGG
CCCCGGCCAAGGTCTCTTCTGGAGCCTCGCTCGTTCGACCAACGTGACCG
AATGGAATGCGAACTGGCAGCTTCTGCAGACGGCCCGCCCAGACCTCGCC
GCCTACTTGGCGGAGGCGGACTTCTACAAGTGGTCGCTGCTGCATCTCAT
GGAGAAAGGCGTGACAGGCTTCGGCGTCGACACGTCCAACTTCGTTGAGA
GCTCCAATGCAGCCTTCCGTGGCCTCCGTGAGCTGCAGCCGCCCGCGTGG
CTCGAGACCATCAGCACGTATCTCGCGACGGAGCGGTACGAGCGCCGCGC
CGAGGCCGAGACTTGGCGGGAGGAGTCGCACATCATCACGCCGCCGGTGA
TGGATCGGTACTGGAAGCAGGCCAAGATGGCGAGCGCCTACAAAGTGGAG
CGCCTTGGGGTCGACCTGGCCAAGGTGGAGCACAACGGCACTGATAGGTT
CGCACACCAGCGCCAAGTTCGTCTCGATGTGCAGCAGTGTACGTGCACGG
ACTGGGAGCAGCTGGGCTACCCGTGCCGCCACGCCGTCGCCTTTGCCAAG
TTAGCAGGCGGCGGCGACCGGCTGAGCAGCGCGGAATGGTTCCGCGACAG
CAGGGTTTTCAGCCCCACTTTTCTGGTGGATACGGTTATAGAGGCTTACT
GCATTGAGGTTGTCTTGCCGCTCCGCGACGACGTTGTGCCGCCCGAGGGG
GCGGCACTTCTTCCGCCGCTGCGGGTGAAGCCGGCCGGGCGTCCGCGCAA
GAAGCGGATCCGCAGCCGGGGGGAGGGCGGTGGGGATGGCGCTGCTAAAC
GTGTCTTTCACTGCGGCCGGTGCCGCAACACCGGCCACACGGCTCGCACT
TGCACGAATCCCGTTGGCGGCTGA
back to top