mRNA_P-wetherbeei_contig6123.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6123.1.1
Unique NamemRNA_P-wetherbeei_contig6123.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6123.1.1 vs. uniprot
Match: A0A521M8C4_9HYPH (TonB family protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521M8C4_9HYPH)

HSP 1 Score: 205 bits (521), Expect = 3.500e-63
Identity = 118/160 (73.75%), Postives = 125/160 (78.12%), Query Frame = 1
Query:    1 PEPAPIPAPTLQSLLAPPAPPXXXXXPELRPSPLTPAPQRKPPAGESAEPPSPHPFVNPADAYSRARVADNYLWQVARKLEGYRYEANVRVNRGVTVVRIVIARDGRLLNASIARSSGVPEFDRGVLAGVRGGSPYTPLPPDIKGDSASFDLPLVSVVGR 480
            PEPAP+PAPT+QSLLAPP   XXXXX                          PHPFVNPADA+SRARVADNYLWQVARKLEGYRY ANV V+RGVTVVR+VIARDGRLLN SIARSSGVPEFDRGVLAGVR GSPY PLPPDIKG+SASFDLPLVS+ GR
Sbjct:  144 PEPAPVPAPTMQSLLAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHPFVNPADAFSRARVADNYLWQVARKLEGYRYNANVNVSRGVTVVRVVIARDGRLLNVSIARSSGVPEFDRGVLAGVRSGSPYAPLPPDIKGESASFDLPLVSITGR 303          
BLAST of mRNA_P-wetherbeei_contig6123.1.1 vs. uniprot
Match: A0A6A7M152_9PROT (TonB family protein n=2 Tax=unclassified Rhodospirillales TaxID=941843 RepID=A0A6A7M152_9PROT)

HSP 1 Score: 203 bits (517), Expect = 3.220e-62
Identity = 96/129 (74.42%), Postives = 114/129 (88.37%), Query Frame = 1
Query:   82 ELRPSPLTPAPQRKPPAGESAEPPSPHPFVNPADAYSRARVADNYLWQVARKLEGYRYEANVRVNRGVTVVRIVIARDGRLLNASIARSSGVPEFDRGVLAGVRGGSPYTPLPPDIKGDSASFDLPLVS 468
            E +PSPL+ AP R+PPAG  +E PSP PFVNPAD Y++AR ADNYLWQV R+L+GYRY+ANVR  +G+TVVR+VIARDGRLLN ++ARSSG+PEFD+GVLAGVR GSPY PLPPDI+GDSA+FDLPLVS
Sbjct:  201 EYKPSPLSTAPSRRPPAGTQSENPSPSPFVNPADTYNKARAADNYLWQVVRRLQGYRYQANVRATQGITVVRVVIARDGRLLNVTVARSSGIPEFDQGVLAGVRSGSPYAPLPPDIRGDSATFDLPLVS 329          
BLAST of mRNA_P-wetherbeei_contig6123.1.1 vs. uniprot
Match: A0A512NLX0_9HYPH (Uncharacterized protein n=2 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NLX0_9HYPH)

HSP 1 Score: 199 bits (505), Expect = 1.600e-59
Identity = 95/130 (73.08%), Postives = 112/130 (86.15%), Query Frame = 1
Query:   79 PELRPSPLTPAPQRKPPAGESAEPPSPHPFVNPADAYSRARVADNYLWQVARKLEGYRYEANVRVNRGVTVVRIVIARDGRLLNASIARSSGVPEFDRGVLAGVRGGSPYTPLPPDIKGDSASFDLPLVS 468
            P+ +PSPL+ AP  +PPAG  ++ PSP PFVNPAD Y++AR ADNYLWQV R+L+GYRY ANV   +G+TVVR+VIARDGRLLN S++RSSGVPEFD+GVLAGVR GSPY PLPPDIKGDSA+FDLPLVS
Sbjct:  277 PQYQPSPLSTAPSHRPPAGTQSDNPSPSPFVNPADTYNKARAADNYLWQVVRRLQGYRYSANVSATQGITVVRVVIARDGRLLNVSVSRSSGVPEFDQGVLAGVRSGSPYAPLPPDIKGDSATFDLPLVS 406          
BLAST of mRNA_P-wetherbeei_contig6123.1.1 vs. uniprot
Match: A0A521LL77_9HYPH (TonB family protein (Fragment) n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LL77_9HYPH)

HSP 1 Score: 195 bits (496), Expect = 2.400e-59
Identity = 97/132 (73.48%), Postives = 114/132 (86.36%), Query Frame = 1
Query:   58 PPXXXXXPELRPSPLTPAPQRKPP-AGESAEPPSPHPFVNPADAYSRARVADNYLWQVARKLEGYRYEANVRVNRGVTVVRIVIARDGRLLNASIARSSGVPEFDRGVLAGVRGGSPYTPLPPDIKGDSASF 450
            PP     PELRPSPLT APQR+PP A ++ EPPS HPFVNPAD Y+RARV+DNYLWQVARKL GYRY+AN R N G+TVV++VIAR+GRLL+ S+ RSSG+PEFD+GVLAGVR GSPY+PLPPDIKG+SA+F
Sbjct:  176 PPPQAPNPELRPSPLTTAPQRRPPSAPQTTEPPSQHPFVNPADTYARARVSDNYLWQVARKLSGYRYQANTRANEGLTVVKVVIARNGRLLDVSVVRSSGIPEFDQGVLAGVRQGSPYSPLPPDIKGESAAF 307          
BLAST of mRNA_P-wetherbeei_contig6123.1.1 vs. uniprot
Match: UPI001E5423F9 (energy transducer TonB n=2 Tax=Reyranella TaxID=445219 RepID=UPI001E5423F9)

HSP 1 Score: 181 bits (459), Expect = 4.900e-53
Identity = 91/130 (70.00%), Postives = 109/130 (83.85%), Query Frame = 1
Query:   82 ELRPSPLTPAPQRKPPAGESAEPPSPHPFVNPADAYSRARVADNYLWQVARKLEGYRYEANVRVNRGVTVVRIVIARDGRLLNASIARSSGVPEFDRGVLAGVRGGSPYTPLPPDIKGDSASFDLPLVSV 471
            EL+PSPL+ AP ++PP+  SAEPPS H FVNPAD Y+RARVADNYL QV RK+ G+RY++N +  +GVTVVRIVIARDGRLL+A++  SSG PEFD GVLAGVR G+PYTPLP +IKG SA FDLPLVS+
Sbjct:  242 ELKPSPLSTAPAKRPPSASSAEPPSQHTFVNPADTYARARVADNYLAQVLRKIVGFRYQSNTQRRQGVTVVRIVIARDGRLLDATVISSSGEPEFDNGVLAGVRAGAPYTPLPDNIKGASAPFDLPLVSI 371          
BLAST of mRNA_P-wetherbeei_contig6123.1.1 vs. uniprot
Match: A0A521QQY1_9HYPH (TonB family protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521QQY1_9HYPH)

HSP 1 Score: 176 bits (446), Expect = 7.550e-52
Identity = 93/148 (62.84%), Postives = 113/148 (76.35%), Query Frame = 1
Query:   31 LQSLLAPPAPPXXXXXPELRPSPLTPAPQRKPPAGESA-EPPSPHPFVNPADAYSRARVADNYLWQVARKLEGYRYEANVRVNRGVTVVRIVIARDGRLLNASIARSSGVPEFDRGVLAGVRGGSPYTPLPPDIKGDSASFDLPLVSV 471
            L +   PPA P      ++RPSPL P  QR+ PA  +  + P+   FVNPADAY+R+R ADNYLWQVA KL+GYRY+AN   +RG TVVR+ IAR+G+LL   + RSSGVPEFDRGVLAGVR GSPYTPLPPDI+G+SASF+LPL+SV
Sbjct:  155 LATXXXPPARPAPGTRQDVRPSPLPPGQQRRAPAVPNPRDAPTTSHFVNPADAYNRSRAADNYLWQVAMKLQGYRYQANTNASRGTTVVRVTIARNGQLLAVEVIRSSGVPEFDRGVLAGVRAGSPYTPLPPDIQGESASFNLPLISV 302          
BLAST of mRNA_P-wetherbeei_contig6123.1.1 vs. uniprot
Match: A0A1Q3LN59_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3LN59_9PROT)

HSP 1 Score: 174 bits (440), Expect = 6.540e-51
Identity = 92/133 (69.17%), Postives = 107/133 (80.45%), Query Frame = 1
Query:   79 PELRPSPLTPAPQRKPPAGESAE--PPSPHPFVNPADAYSRARVADNYLWQVARKLEGYRYEANVRVNRGVTVVRIVIARDGRLLNASIARSSGVPEFDRGVLAGVRGGSPYTPLPPDIKGDSASFDLPLVSV 471
            P++RPSPL P  QR+ PA  +A+  P + H FVNPADA++RAR ADNYLWQVA KL+GYRY+AN    RG TVVRI IAR+G LL   I RSSGVPEFDRGVLAGVR GSPY+PLP DI+G+SASF+LPLVSV
Sbjct:  174 PDVRPSPLPPGAQRRAPAVPNAQDAPTTSH-FVNPADAFNRARAADNYLWQVAMKLQGYRYQANTNATRGTTVVRITIARNGHLLAVEIIRSSGVPEFDRGVLAGVRAGSPYSPLPADIQGESASFNLPLVSV 305          
BLAST of mRNA_P-wetherbeei_contig6123.1.1 vs. uniprot
Match: A0A521QYL3_9HYPH (TonB family protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521QYL3_9HYPH)

HSP 1 Score: 171 bits (434), Expect = 9.010e-50
Identity = 86/124 (69.35%), Postives = 102/124 (82.26%), Query Frame = 1
Query:  100 LTPAPQRKPPAGESAEPPSPHPFVNPADAYSRARVADNYLWQVARKLEGYRYEANVRVNRGVTVVRIVIARDGRLLNASIARSSGVPEFDRGVLAGVRGGSPYTPLPPDIKGDSASFDLPLVSV 471
            L+ AP R+PP+  SAEPPS H FVNPAD Y+RA+VADNYL +V RK+ GYRY+++ +  RGVTVVRIVIARDGRLL A++  SSG PEFD GVLAGVR G+PY+PLP +IKG SA FDLPLVSV
Sbjct:  204 LSTAPSRRPPSASSAEPPSQHRFVNPADTYARAKVADNYLSEVLRKIVGYRYQSSTQARRGVTVVRIVIARDGRLLGATVISSSGEPEFDEGVLAGVRAGAPYSPLPDNIKGASAPFDLPLVSV 327          
BLAST of mRNA_P-wetherbeei_contig6123.1.1 vs. uniprot
Match: A0A1T4QEX6_9HYPH (TonB family C-terminal domain-containing protein n=2 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4QEX6_9HYPH)

HSP 1 Score: 163 bits (412), Expect = 3.630e-49
Identity = 80/110 (72.73%), Postives = 90/110 (81.82%), Query Frame = 1
Query:  142 AEPPSPHPFVNPADAYSRARVADNYLWQVARKLEGYRYEANVRVNRGVTVVRIVIARDGRLLNASIARSSGVPEFDRGVLAGVRGGSPYTPLPPDIKGDSASFDLPLVSV 471
            AEPP+  PFVNPAD Y+RARV+DNYLWQVA KL GYRY A   +   +TV+RIVIARDGRLL+A IA+SSG P  D GVLAGVR GSPY PLPP IKG+SA+FDLPLVSV
Sbjct:    4 AEPPTSSPFVNPADVYNRARVSDNYLWQVANKLTGYRYYARADITEAMTVIRIVIARDGRLLDARIAQSSGFPVLDNGVLAGVRAGSPYAPLPPSIKGESAAFDLPLVSV 113          
BLAST of mRNA_P-wetherbeei_contig6123.1.1 vs. uniprot
Match: A0A6N6ZS46_9PROT (Pathoproteinis-related protein 1-like protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6N6ZS46_9PROT)

HSP 1 Score: 158 bits (400), Expect = 1.060e-44
Identity = 78/114 (68.42%), Postives = 94/114 (82.46%), Query Frame = 1
Query:  130 AGESAEPPSPHPFVNPADAYSRARVADNYLWQVARKLEGYRYEANVRVNRGVTVVRIVIARDGRLLNASIARSSGVPEFDRGVLAGVRGGSPYTPLPPDIKGDSASFDLPLVSV 471
            +  SAEPPS H  VNPAD Y+RA+VADNYL +V RK+ GYRY++N +  +GVTVVRIVIARDGRLL+A++  SSG PEFD GVLAGVR G+PY+PLP +IKG SA FDLPLVS+
Sbjct:  212 SASSAEPPSQHRLVNPADTYARAKVADNYLSEVLRKIVGYRYQSNTQKRQGVTVVRIVIARDGRLLSATVISSSGEPEFDNGVLAGVRAGAPYSPLPDNIKGASAPFDLPLVSI 325          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6123.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521M8C4_9HYPH3.500e-6373.75TonB family protein n=1 Tax=Reyranella sp. TaxID=1... [more]
A0A6A7M152_9PROT3.220e-6274.42TonB family protein n=2 Tax=unclassified Rhodospir... [more]
A0A512NLX0_9HYPH1.600e-5973.08Uncharacterized protein n=2 Tax=Reyranella soli Ta... [more]
A0A521LL77_9HYPH2.400e-5973.48TonB family protein (Fragment) n=1 Tax=Reyranella ... [more]
UPI001E5423F94.900e-5370.00energy transducer TonB n=2 Tax=Reyranella TaxID=44... [more]
A0A521QQY1_9HYPH7.550e-5262.84TonB family protein n=1 Tax=Reyranella sp. TaxID=1... [more]
A0A1Q3LN59_9PROT6.540e-5169.17Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A521QYL3_9HYPH9.010e-5069.35TonB family protein n=1 Tax=Reyranella sp. TaxID=1... [more]
A0A1T4QEX6_9HYPH3.630e-4972.73TonB family C-terminal domain-containing protein n... [more]
A0A6N6ZS46_9PROT1.060e-4468.42Pathoproteinis-related protein 1-like protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6123contigP-wetherbeei_contig6123:2..484 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1205680.CAKO01000042_gene5353
Preferred nametonB
PFAMsTonB_2,TonB_C
Model size483
Max annot lvl2|Bacteria
KEGG koko:K03832
KEGG TC2.C.1.1
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.31e-53
EggNOG OGsCOG0810@1|root,COG0810@2|Bacteria
Descriptionenergy transducer activity
Cds size483
COG categoryM
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186889.9893334-CDS-P-wetherbeei_contig6123:1..4841683186889.9893334-CDS-P-wetherbeei_contig6123:1..484Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6123 2..484 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6123.1.1prot_P-wetherbeei_contig6123.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6123 2..484 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6123.1.1

>prot_P-wetherbeei_contig6123.1.1 ID=prot_P-wetherbeei_contig6123.1.1|Name=mRNA_P-wetherbeei_contig6123.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=161bp
PEPAPIPAPTLQSLLAPPAPPPPAPRPELRPSPLTPAPQRKPPAGESAEP
PSPHPFVNPADAYSRARVADNYLWQVARKLEGYRYEANVRVNRGVTVVRI
VIARDGRLLNASIARSSGVPEFDRGVLAGVRGGSPYTPLPPDIKGDSASF
DLPLVSVVGR*
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mRNA from alignment at P-wetherbeei_contig6123:2..484+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6123.1.1 ID=mRNA_P-wetherbeei_contig6123.1.1|Name=mRNA_P-wetherbeei_contig6123.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig6123:2..484+ (Phaeothamnion wetherbeei SAG_119_79)
CCCGAGCCGGCGCCGATCCCGGCGCCCACACTGCAGTCCCTGCTGGCCCC GCCGGCGCCGCCCCCGCCAGCACCCCGGCCGGAGCTTCGGCCTTCGCCGC TCACGCCCGCGCCCCAGCGGAAACCGCCTGCGGGCGAGTCGGCGGAGCCG CCGTCGCCGCACCCCTTCGTCAATCCTGCAGACGCCTACTCGCGCGCCCG CGTCGCCGACAACTATCTCTGGCAGGTCGCGCGCAAGCTCGAGGGCTATC GCTACGAGGCCAACGTCCGCGTCAACCGGGGCGTCACCGTGGTGCGTATC GTCATCGCGCGCGATGGCCGGTTGCTCAACGCCAGCATCGCCCGTTCGAG CGGAGTCCCGGAGTTCGACCGCGGCGTCCTGGCCGGCGTGCGCGGCGGCT CGCCCTACACGCCGCTGCCGCCCGATATCAAGGGCGACAGCGCCAGCTTC GACTTACCACTGGTCTCCGTCGTTGGCCGATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6123:2..484+

>mRNA_P-wetherbeei_contig6123.1.1 ID=mRNA_P-wetherbeei_contig6123.1.1|Name=mRNA_P-wetherbeei_contig6123.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig6123:2..484+ (Phaeothamnion wetherbeei SAG_119_79)
CCCGAGCCGGCGCCGATCCCGGCGCCCACACTGCAGTCCCTGCTGGCCCC
GCCGGCGCCGCCCCCGCCAGCACCCCGGCCGGAGCTTCGGCCTTCGCCGC
TCACGCCCGCGCCCCAGCGGAAACCGCCTGCGGGCGAGTCGGCGGAGCCG
CCGTCGCCGCACCCCTTCGTCAATCCTGCAGACGCCTACTCGCGCGCCCG
CGTCGCCGACAACTATCTCTGGCAGGTCGCGCGCAAGCTCGAGGGCTATC
GCTACGAGGCCAACGTCCGCGTCAACCGGGGCGTCACCGTGGTGCGTATC
GTCATCGCGCGCGATGGCCGGTTGCTCAACGCCAGCATCGCCCGTTCGAG
CGGAGTCCCGGAGTTCGACCGCGGCGTCCTGGCCGGCGTGCGCGGCGGCT
CGCCCTACACGCCGCTGCCGCCCGATATCAAGGGCGACAGCGCCAGCTTC
GACTTACCACTGGTCTCCGTCGTTGGCCGATGA
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