mRNA_P-wetherbeei_contig6122.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6122.1.1
Unique NamemRNA_P-wetherbeei_contig6122.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: D8LMA4_ECTSI (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA4_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 3.780e-47
Identity = 75/111 (67.57%), Postives = 86/111 (77.48%), Query Frame = 1
Query:   13 GVVLSKAAAHTAPELTLS-RDQLTVAGDKGFRMSRATLGVDDGNWYWELVCLEPEKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
            GVV+S++A   AP+LT+  +DQLTV G KGFRM+RAT GV +G WYWE   L PE  + HCR GWS   G+LQ PVGYD+ SYAYRDIAGSKVHDS R DNYGEPWGPGDV
Sbjct:   85 GVVISRSAEDCAPQLTMPHKDQLTVTGHKGFRMARATKGVSNGTWYWECAVLPPETTEGHCRLGWSLPAGKLQGPVGYDKFSYAYRDIAGSKVHDSHRSDNYGEPWGPGDV 195          
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: A0A6H5JYI9_9PHAE (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYI9_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 1.050e-44
Identity = 75/111 (67.57%), Postives = 86/111 (77.48%), Query Frame = 1
Query:   13 GVVLSKAAAHTAPELTLS-RDQLTVAGDKGFRMSRATLGVDDGNWYWELVCLEPEKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
            GVV+S++A   AP+LT+  +DQLTV G KGFRM+RAT GV +G WYWE   L PE  + HCR GWS   G+LQ PVGYD+ SYAYRDIAGSKVHDS R DNYGEPWGPGDV
Sbjct:   87 GVVISRSAEDCAPQLTMPHKDQLTVTGHKGFRMARATKGVSNGTWYWECTVLPPETTEGHCRLGWSLPAGKLQGPVGYDKFSYAYRDIAGSKVHDSLRSDNYGEPWGPGDV 197          
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: A0A835YSC8_9STRA (Concanavalin A-like lectin/glucanase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSC8_9STRA)

HSP 1 Score: 147 bits (372), Expect = 5.310e-43
Identity = 69/110 (62.73%), Postives = 83/110 (75.45%), Query Frame = 1
Query:   13 GVVLSKAAAHTAPELTLSRDQLTVAGDKGFRMSRATLGVDDGNWYWELVCLEPEKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
            GV LS+     AP+L LS+DQLTV G+KGFRM RAT G  +G WY+E++ L P + D H R GWST  G+LQAPVGYDR SYAYRD+AGS+VH S R+D YG P+GPGDV
Sbjct:    1 GVALSRT--DCAPQLMLSKDQLTVTGEKGFRMVRATAGASEGAWYFEVLVLPPARADGHVRIGWSTGAGDLQAPVGYDRHSYAYRDLAGSRVHASLRHDGYGAPYGPGDV 108          
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: A0A7S0TCR8_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TCR8_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.400e-30
Identity = 55/100 (55.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:   46 APELTLSRDQLTVAGDKGFRMSRATLGVDDGNWYWELVCLEPEKPDS-HCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
            A +L++S+D L++ GDKG+RM+RA +GV +G WY+E V  E +  D  H R GW+T   ELQA VG+DR  + YRD AGS  HDS R DNYGE +GPGDV
Sbjct:   19 ASQLSVSKDGLSLTGDKGYRMARAVIGVSEGCWYFESVIGESKNGDQGHYRVGWATKEAELQASVGFDRFGFGYRDTAGSLCHDSNREDNYGEAYGPGDV 118          
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: UPI00064D8D25 (protein TRAUCO-like n=1 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064D8D25)

HSP 1 Score: 106 bits (264), Expect = 1.190e-26
Identity = 55/109 (50.46%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   16 VVLSKAAAHTAPELTLSRDQLTVAGDKGFRMSRATLGVDDGNWYWELVCLEPEKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
            + LSK   H A ++ LS D++T +  KG+RM RAT GV +G WY+E+  +   +   H R GWSTD+G+LQAPVGYD  S+ YRDI GSKVH + RY   GE +  GDV
Sbjct:   21 ICLSKV--HKAEKVELSDDRMTASSTKGYRMVRATRGVVEGAWYFEIKVVRLGET-GHTRLGWSTDKGDLQAPVGYDGNSFGYRDIDGSKVHKALRYKYGGEGYKEGDV 126          
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: A0A4D9CPG9_9STRA (B30.2/SPRY domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPG9_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.070e-26
Identity = 55/120 (45.83%), Postives = 72/120 (60.00%), Query Frame = 1
Query:   40 HTAPELTLSRDQLTVAGDK-GFRMSRATLGVDDGNWYWELVCLEP------------------EKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
             +AP+L LSRD + V G + G+RM++ +  V  GNWYWE   LE                   E+   H R GW+T +G LQAPVGYD+ S+ YRD+AGSK+H  +R D YGE +GPGDV
Sbjct:   80 ESAPQLFLSRDLMEVTGCRAGYRMAKGSDCVYSGNWYWECEILEDARTVTAATGGDRQSEERAEEDCPHFRVGWATKQGNLQAPVGYDKHSFGYRDVAGSKIHKCERVDYYGEAYGPGDV 199          
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: A0A482ULD5_9ARCH (B30.2/SPRY domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482ULD5_9ARCH)

HSP 1 Score: 104 bits (260), Expect = 3.060e-26
Identity = 50/79 (63.29%), Postives = 56/79 (70.89%), Query Frame = 1
Query:  106 MSRATLGVDDGNWYWELVCLEPEKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
            M RAT GV +G++YWE   L     D+H R GWST  GELQAPVGYD+ SYAYRDIAGS VH S R D YGE +G GDV
Sbjct:    1 MVRATHGVHEGSYYWEAEVLPSLGDDAHVRIGWSTREGELQAPVGYDQHSYAYRDIAGSMVHKSTRIDEYGEAYGVGDV 79          
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: W7TV98_9STRA (Set1 ash2 histone methyltransferase complex subunit ash2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TV98_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.010e-25
Identity = 55/120 (45.83%), Postives = 72/120 (60.00%), Query Frame = 1
Query:   40 HTAPELTLSRDQLTVAGDK-GFRMSRATLGVDDGNWYWELVCLEP------------------EKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
             +AP+L LSRD + V G + G+RM++ +  V  GNWYWE   LE                   E+   H R GW+T +G LQAPVGYD+ S+ YRD+AGSK+H  +R D YGE +GPGDV
Sbjct:   80 ESAPQLFLSRDLMEVTGCRAGYRMAKGSDCVYSGNWYWECEILEDARTVTAATGGDRQSEERAEEDCPHFRVGWATKQGNLQAPVGYDKHSFGYRDVAGSKIHKCERVDYYGEAYGPGDV 199          
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: A0A7S2MZN0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MZN0_9EUKA)

HSP 1 Score: 100 bits (248), Expect = 5.190e-25
Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 1
Query:   76 LTVAGDKGFRMSRATLGVDDGNWYWEL-VCLEPEKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
            LT  G KG+RM RAT GV  G +++E+ VC      D H R GW T+ G++QAPVGYD+ SY+YRD+ GSK H+S   D YGE +GPGDV
Sbjct:    8 LTAIGYKGYRMVRATHGVSRGTYFYEVKVCDSLNSEDGHARIGWCTESGDVQAPVGYDQNSYSYRDVNGSKFHESIGTD-YGEAYGPGDV 96          
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: A0A176VX76_MARPO (B30.2/SPRY domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VX76_MARPO)

HSP 1 Score: 107 bits (267), Expect = 7.470e-25
Identity = 53/100 (53.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:   40 HTAPELTLSRDQLTVAGDKGFRMSRATLGVDDGNWYWELVCLEPEKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGD 339
            H A ++ LS D+LT +G KG+RM RAT GV +G WY+E++ ++      H R GWS+ RG++QAPVGYD  SYAYRD+ GSKVH + R + YGEP+  GD
Sbjct:  181 HKAEKIELSLDRLTASGSKGYRMVRATRGVVEGAWYFEII-VQNLGLTGHTRLGWSSRRGDIQAPVGYDAHSYAYRDVDGSKVHCALR-EPYGEPYVEGD 278          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMA4_ECTSI3.780e-4767.57B30.2/SPRY domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JYI9_9PHAE1.050e-4467.57B30.2/SPRY domain-containing protein n=1 Tax=Ectoc... [more]
A0A835YSC8_9STRA5.310e-4362.73Concanavalin A-like lectin/glucanase domain-contai... [more]
A0A7S0TCR8_9STRA2.400e-3055.00Hypothetical protein n=1 Tax=Chrysocystis fragilis... [more]
UPI00064D8D251.190e-2650.46protein TRAUCO-like n=1 Tax=Erythranthe guttata Ta... [more]
A0A4D9CPG9_9STRA2.070e-2645.83B30.2/SPRY domain-containing protein n=1 Tax=Nanno... [more]
A0A482ULD5_9ARCH3.060e-2663.29B30.2/SPRY domain-containing protein n=1 Tax=archa... [more]
W7TV98_9STRA1.010e-2545.83Set1 ash2 histone methyltransferase complex subuni... [more]
A0A7S2MZN0_9EUKA5.190e-2554.44Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A176VX76_MARPO7.470e-2553.00B30.2/SPRY domain-containing protein n=2 Tax=March... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6122contigP-wetherbeei_contig6122:3..687 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LMA4
Preferred nameASH2L
PFAMsSPRY
Model size342
Max annot lvl2759|Eukaryota
KEGG koko:K13113,ko:K14964,ko:K14967
KEGG Pathwayko04212,ko04934,map04212,map04934
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000723,GO:0000785,GO:0000790,GO:0000791,GO:0000902,GO:0000904,GO:0001067,GO:0001932,GO:0001933,GO:0002009,GO:0002164,GO:0002165,GO:0002168,GO:0002376,GO:0002520,GO:0002682,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005703,GO:0005719,GO:0006139,GO:0006259,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006342,GO:0006348,GO:0006351,GO:0006355,GO:0006357,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007275,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007444,GO:0007472,GO:0007474,GO:0007476,GO:0007552,GO:0007560,GO:0007568,GO:0008013,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008284,GO:0008340,GO:0008757,GO:0009058,GO:0009059,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009793,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009965,GO:0009987,GO:0010016,GO:0010033,GO:0010154,GO:0010228,GO:0010259,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010639,GO:0014070,GO:0016043,GO:0016070,GO:0016278,GO:0016279,GO:0016358,GO:0016458,GO:0016567,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018024,GO:0018130,GO:0018193,GO:0018205,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019787,GO:0019899,GO:0022008,GO:0022414,GO:0022607,GO:0030030,GO:0030097,GO:0030154,GO:0030182,GO:0031056,GO:0031057,GO:0031058,GO:0031060,GO:0031062,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031400,GO:0031401,GO:0031490,GO:0031497,GO:0031507,GO:0031974,GO:0031981,GO:0032200,GO:0032259,GO:0032268,GO:0032269,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032774,GO:0032989,GO:0032990,GO:0032991,GO:0033043,GO:0033044,GO:0033127,GO:0033128,GO:0033554,GO:0033993,GO:0034401,GO:0034641,GO:0034645,GO:0034654,GO:0034708,GO:0034968,GO:0035075,GO:0035097,GO:0035107,GO:0035114,GO:0035120,GO:0035209,GO:0035220,GO:0035239,GO:0035295,GO:0036211,GO:0036314,GO:0040029,GO:0042054,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043627,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044665,GO:0044666,GO:0045595,GO:0045637,GO:0045652,GO:0045814,GO:0045815,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045936,GO:0045944,GO:0046483,GO:0048096,GO:0048188,GO:0048189,GO:0048316,GO:0048366,GO:0048367,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048563,GO:0048569,GO:0048608,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048812,GO:0048813,GO:0048827,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051568,GO:0051569,GO:0051571,GO:0051716,GO:0060249,GO:0060255,GO:0060290,GO:0060322,GO:0060429,GO:0060562,GO:0060776,GO:0061458,GO:0061630,GO:0061659,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070647,GO:0070828,GO:0070868,GO:0070869,GO:0071103,GO:0071339,GO:0071704,GO:0071840,GO:0080090,GO:0080182,GO:0090304,GO:0097159,GO:0097305,GO:0097549,GO:0097659,GO:0098687,GO:0099402,GO:0120036,GO:0120039,GO:0140096,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901654,GO:1901700,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1904837,GO:1905268,GO:1905269,GO:1905392,GO:1990188,GO:1990234,GO:2000026,GO:2000112,GO:2000113,GO:2001141,GO:2001251,GO:2001252
Exons3
Evalue6.2e-48
EggNOG OGsKOG2626@1|root,KOG2626@2759|Eukaryota
Descriptioneuchromatin binding
Cds size342
COG categoryK
BRITEko00000,ko00001,ko03036,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186889.8924706-CDS-P-wetherbeei_contig6122:2..781683186889.8924706-CDS-P-wetherbeei_contig6122:2..78Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6122 3..78 -
1683186889.9054415-CDS-P-wetherbeei_contig6122:326..4491683186889.9054415-CDS-P-wetherbeei_contig6122:326..449Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6122 327..449 -
1683186889.9157128-CDS-P-wetherbeei_contig6122:544..6871683186889.9157128-CDS-P-wetherbeei_contig6122:544..687Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6122 545..687 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6122.1.1prot_P-wetherbeei_contig6122.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6122 3..687 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6122.1.1

>prot_P-wetherbeei_contig6122.1.1 ID=prot_P-wetherbeei_contig6122.1.1|Name=mRNA_P-wetherbeei_contig6122.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=114bp
MSLQGVVLSKAAAHTAPELTLSRDQLTVAGDKGFRMSRATLGVDDGNWYW
ELVCLEPEKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQ
RYDNYGEPWGPGDV
back to top

mRNA from alignment at P-wetherbeei_contig6122:3..687-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6122.1.1 ID=mRNA_P-wetherbeei_contig6122.1.1|Name=mRNA_P-wetherbeei_contig6122.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=685bp|location=Sequence derived from alignment at P-wetherbeei_contig6122:3..687- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCTTTGCAGGGAGTCGTCTTGTCTAAGGCGGCTGCTCACACTGCCCC GGAGCTTACGCTATCAAGAGATCAGCTCACGGTGGCTGGAGACAAGGGTT TCCGCATGAGTCGAGCAACTCTCGGTGTCGACGATGGGAACTGGTGCGCG AGCTTTCCGTATGCTCAAACCGTTCTTCTTTTGTTTCTTTGAAAGTGGTG CATGTTAAAGTGAACTCTTGCGTGCTCAAGCCCTTCAGGTACTGGGAACT CGTGTGCTTGGAGCCTGAGAAACCAGACAGCCATTGCCGGGCTGGGTGGT CCACCGACCGCGGCGAATTGCAGGCGCCCGTCGGCTACGACCGGCGAAGC TATGCGTATAGGTGCGTCGTGGGAGGAGTATCTCTTCGGAAATGGATTAC GGGGCGTGCTGTTCCTGCCTTCGCGTCGTAGATGGTGTTGCCGATCTGAA GGAAATACATATGGTTGTCTTTGTTTTCTCGTCGACAATTACCATTCGCA TCCCTTTTCTGCCGCAAACTCGCCCACGGCCTCCCCCCTTCTTCTGTTTC GATTGTGCTCTCTACATATCCTCCGCCAAATTCATTGTTGGGCTCATTTC AATTGCCAGGGACATTGCTGGCTCCAAGGTGCACGACAGCCAGCGCTACG ACAACTACGGTGAGCCGTGGGGGCCTGGCGACGTC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6122:3..687-

>mRNA_P-wetherbeei_contig6122.1.1 ID=mRNA_P-wetherbeei_contig6122.1.1|Name=mRNA_P-wetherbeei_contig6122.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=342bp|location=Sequence derived from alignment at P-wetherbeei_contig6122:3..687- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCTTTGCAGGGAGTCGTCTTGTCTAAGGCGGCTGCTCACACTGCCCC
GGAGCTTACGCTATCAAGAGATCAGCTCACGGTGGCTGGAGACAAGGGTT
TCCGCATGAGTCGAGCAACTCTCGGTGTCGACGATGGGAACTGGTACTGG
GAACTCGTGTGCTTGGAGCCTGAGAAACCAGACAGCCATTGCCGGGCTGG
GTGGTCCACCGACCGCGGCGAATTGCAGGCGCCCGTCGGCTACGACCGGC
GAAGCTATGCGTATAGGGACATTGCTGGCTCCAAGGTGCACGACAGCCAG
CGCTACGACAACTACGGTGAGCCGTGGGGGCCTGGCGACGTC
back to top