mRNA_P-wetherbeei_contig612.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig612.1.1
Unique NamemRNA_P-wetherbeei_contig612.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig612.1.1 vs. uniprot
Match: A0A835YJH4_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJH4_9STRA)

HSP 1 Score: 230 bits (587), Expect = 7.530e-72
Identity = 115/170 (67.65%), Postives = 136/170 (80.00%), Query Frame = 1 
Query:   58 MNVVQEIQRINERELEAGLSGDASWHAKYKDSAWVFVGGLVTTLTEGDVLCVMSQWGEIEDINLVRDKATGKSKGFAFLKYEDQRSTILAVDNFNGIKLLDRTLRVDHCERYRLPKELKDKEEAEEE------------EKIAEWRPGHAYEGKALASDLSVTKGVDLFA 531
            MNVV+EIQ+INEREL+ GL+G ASWH KYKDSAWVFVGGL   LTEGDV+CV+SQWGEIEDINLVRD+ TGKSKGFAF+KYEDQRSTILAVDN NG +LL R LRVDH E+YRLPKEL+DKE+A++E               A W+PGHAYEGK +    ++ +GVD++A
Sbjct:    1 MNVVREIQKINERELKEGLTGSASWHHKYKDSAWVFVGGLGYELTEGDVICVLSQWGEIEDINLVRDQDTGKSKGFAFVKYEDQRSTILAVDNMNGAQLLGRPLRVDHVEKYRLPKELQDKEDAQQEGGGEQGGEGGEPRSAAAWKPGHAYEGKEIRGSHTLAQGVDVWA 170
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BLAST of mRNA_P-wetherbeei_contig612.1.1 vs. uniprot
Match: A0A7S3YEY6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEY6_HETAK)

HSP 1 Score: 227 bits (578), Expect = 3.150e-69
Identity = 114/167 (68.26%), Postives = 138/167 (82.63%), Query Frame = 1 
Query:   58 MNVVQEIQRINERELEAGLSG-DASWHAKYKDSAWVFVGGLVTTLTEGDVLCVMSQWGEIEDINLVRDKATGKSKGFAFLKYEDQRSTILAVDNFNGIKLLDRTLRVDHCERYRLPKELKDKEEA-EEEEKI--------AEWRPGHAYEGKALASDLSVTKGVDLF 528
            MNV+QEI+RIN+RELEAGL+G DASWH+KYK+SAWV+VG +   LTEGD+LC MSQWGEIEDIN VRDK TGK KGFAF+KYEDQRST+LAVDNFNGI+L+DRTLRVDHCE+YRLPKE++DKE+  EE+ K+        +++ PGHAY+   LAS   + KG DLF
Sbjct:    1 MNVIQEIKRINDRELEAGLTGTDASWHSKYKNSAWVYVGSIPYALTEGDILCFMSQWGEIEDINYVRDKDTGKPKGFAFVKYEDQRSTVLAVDNFNGIELVDRTLRVDHCEKYRLPKEVQDKEDQLEEDAKLLGKQHDSSSKFGPGHAYKDMELASKYDIAKGQDLF 167
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BLAST of mRNA_P-wetherbeei_contig612.1.1 vs. uniprot
Match: A0A7S2RL84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL84_9STRA)

HSP 1 Score: 218 bits (555), Expect = 6.130e-67
Identity = 109/169 (64.50%), Postives = 135/169 (79.88%), Query Frame = 1 
Query:   58 MNVVQEIQRINERELEAGLSGDA-SWHAKYKDSAWVFVGGLVTTLTEGDVLCVMSQWGEIEDINLVRDKATGKSKGFAFLKYEDQRSTILAVDNFNGIKLLDRTLRVDHCERYRLPKELKDKEEAEEE-----------EKIAEWRPGHAYEGKALASDLSVTKGVDLF 528
            MNV+QEI+RINE EL  G++G A SWHA+Y+DSA+VFVGGL   L EGDVLCV SQWGE+EDINLVRD+ TGKSKGFAF+KYEDQRST+LAVDNFNG++LL R +RVDH  +Y+LP  L++KEEAEEE           E+ +++RPGHAYEG  LA+  ++ KGVDL+
Sbjct:    2 MNVIQEIKRINEEELSRGVAGGAGSWHAQYRDSAYVFVGGLPYDLVEGDVLCVFSQWGEVEDINLVRDEKTGKSKGFAFIKYEDQRSTVLAVDNFNGVELLGRLIRVDHVAKYKLPSHLREKEEAEEENSGHYGPEGDGEEESKYRPGHAYEGAELANKFNIHKGVDLY 170
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BLAST of mRNA_P-wetherbeei_contig612.1.1 vs. uniprot
Match: D7FPK4_ECTSI (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPK4_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 8.380e-67
Identity = 112/168 (66.67%), Postives = 133/168 (79.17%), Query Frame = 1 
Query:   58 MNVVQEIQRINERELEAGLSGDASWHAKYKDSAWVFVGGLVTTLTEGDVLCVMSQWGEIEDINLVRDKATGKSKGFAFLKYEDQRSTILAVDNFNGIKLLDRTLRVDHCERYRLPKELKDKEEAEEEEKIA----------EWRPGHAYEGKALASDLSVTKGVDLFA 531
            MNV+QEI+RINERELE G+SG ASWH +YKDSAWVF GG    LTEGD+LCVMSQWGEIEDINL R+K TGKSKGF F+KYE+Q+STILAVDNFNGI LL RT+RVDH  +Y LP E+++K E E+EE++A          +WRPG AYEGK LA+  +  KGVD+FA
Sbjct:    1 MNVIQEIKRINERELEQGVSGKASWHHEYKDSAWVFAGGFPYDLTEGDILCVMSQWGEIEDINLCREKDTGKSKGFCFIKYENQKSTILAVDNFNGIDLLGRTIRVDHKHKYSLPAEVREKAEKEDEERVARGEAPSEKGPQWRPGVAYEGKQLATSHNFHKGVDVFA 168
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BLAST of mRNA_P-wetherbeei_contig612.1.1 vs. uniprot
Match: A0A4D9D1V2_9STRA (RRM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1V2_9STRA)

HSP 1 Score: 224 bits (570), Expect = 2.220e-66
Identity = 113/169 (66.86%), Postives = 134/169 (79.29%), Query Frame = 1 
Query:   58 MNVVQEIQRINERELEAGLSG-DASWHAKYKDSAWVFVGGLVTTLTEGDVLCVMSQWGEIEDINLVRDKATGKSKGFAFLKYEDQRSTILAVDNFNGIKLLDRTLRVDHCERYRLPKELKDKEEAEEEEKIA----------EWRPGHAYEGKALASDLSVTKGVDLFA 531
            MNVV+EIQR+NE+EL+ G +G + SWH +YKDSAWVFVG L   L+EGDVLCVMSQWGEIED++LVRDK TGKSKGFAFLKYEDQRSTILAVDN NGIKLL+RTLRVDH E+Y LPKE+ +K E +E+ ++            W+PGHAYEGK L     ++KGVDLFA
Sbjct:    1 MNVVREIQRLNEKELQRGTAGMEGSWHGQYKDSAWVFVGSLPLQLSEGDVLCVMSQWGEIEDLHLVRDKGTGKSKGFAFLKYEDQRSTILAVDNMNGIKLLERTLRVDHKEKYALPKEVLEKAEEKEKARLEAGEDGGGGGPRWKPGHAYEGKELVEGHDLSKGVDLFA 169
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BLAST of mRNA_P-wetherbeei_contig612.1.1 vs. uniprot
Match: A0A0P1A7U4_PLAHL (Rna-binding motif x-linked 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A7U4_PLAHL)

HSP 1 Score: 218 bits (555), Expect = 8.440e-66
Identity = 109/166 (65.66%), Postives = 134/166 (80.72%), Query Frame = 1 
Query:   58 MNVVQEIQRINERELEAGLSGDASWHAKYKDSAWVFVGGLVTTLTEGDVLCVMSQWGEIEDINLVRDKATGKSKGFAFLKYEDQRSTILAVDNFNGIKLLDRTLRVDHCERYRLPKELKDKEEAEEEEKIAEWR--PGHAYEGKALASDLSVTKGVDLFAVLPPSH 549
            MNVV EIQR+NERELE  +    SWH KYKDSAWVFVGGL   L+EGDVLCV+SQ+GEIEDI+LVRD  TGKSKGFAF+K+EDQRSTILAVDN NG KLLDR LRVDH  +Y+LPKEL+++ ++E+++ + + R  PGHAYEGK LAS   + KGV++FA +  +H
Sbjct:    1 MNVVAEIQRLNERELELNVPLSGSWHQKYKDSAWVFVGGLPFELSEGDVLCVLSQFGEIEDIHLVRDGKTGKSKGFAFIKFEDQRSTILAVDNLNGFKLLDRVLRVDHVLKYKLPKELQEESDSEDDDHVRKQRGLPGHAYEGKELASSFDLEKGVNVFATVKETH 166
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BLAST of mRNA_P-wetherbeei_contig612.1.1 vs. uniprot
Match: W2N0T6_PHYPR (RRM domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2N0T6_PHYPR)

HSP 1 Score: 214 bits (546), Expect = 1.890e-64
Identity = 110/165 (66.67%), Postives = 130/165 (78.79%), Query Frame = 1 
Query:   58 MNVVQEIQRINERELEAGLSGDASWHAKYKDSAWVFVGGLVTTLTEGDVLCVMSQWGEIEDINLVRDKATGKSKGFAFLKYEDQRSTILAVDNFNGIKLLDRTLRVDHCERYRLPKELKDKEEAEEE-EKIAEWRPGHAYEGKALASDLSVTKGVDLFAVLPPSH 549
            MNVV EIQR+NERELE  +    SWH KY +SAWVFVGGL   L+EGDVLCV+SQ+GEIEDI+LVRD  TGKSKGFAF+K+EDQRSTILAVDN NG KLLDR LRVDH  +Y+LPKEL++  ++E+E ++     PGHAYEGK LASD  + KGVD+FA    SH
Sbjct:    1 MNVVAEIQRLNERELELNVPLSGSWHQKYSESAWVFVGGLPFELSEGDVLCVLSQFGEIEDIHLVRDGKTGKSKGFAFIKFEDQRSTILAVDNLNGFKLLDRVLRVDHVLKYKLPKELQEDSDSEDEGDRKQRGLPGHAYEGKELASDFDLHKGVDVFAAPEESH 165
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BLAST of mRNA_P-wetherbeei_contig612.1.1 vs. uniprot
Match: A0A2P4XM74_9STRA (U2 snRNP component IST3 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XM74_9STRA)

HSP 1 Score: 209 bits (532), Expect = 5.670e-63
Identity = 105/157 (66.88%), Postives = 126/157 (80.25%), Query Frame = 1 
Query:   58 MNVVQEIQRINERELEAGLSGDASWHAKYKDSAWVFVGGLVTTLTEGDVLCVMSQWGEIEDINLVRDKATGKSKGFAFLKYEDQRSTILAVDNFNGIKLLDRTLRVDHCERYRLPKELKDKEEAEEEEKIAEWR--PGHAYEGKALASDLSVTKGVD 522
            MNVV EIQR+NERELE  +    SWH KY +SAW+F+GGL   L+EGDVLCV+SQ+GEIEDI+LVRD  TGKSKGFAF+KYEDQRSTILAVDN N  KLLDR LRVDH  +Y+LPKEL++  ++E+E+K  + R  PGHAYEGK LA+D  + KGVD
Sbjct:    1 MNVVAEIQRLNERELELDVPLSGSWHQKYSESAWIFIGGLPFELSEGDVLCVLSQFGEIEDIHLVRDGKTGKSKGFAFIKYEDQRSTILAVDNLNSFKLLDRVLRVDHVLKYKLPKELQEDSDSEDEDKERKQRGLPGHAYEGKELATDFDLHKGVD 157
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BLAST of mRNA_P-wetherbeei_contig612.1.1 vs. uniprot
Match: A0A6A3KRR2_9STRA (RRM domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KRR2_9STRA)

HSP 1 Score: 211 bits (536), Expect = 5.980e-63
Identity = 106/159 (66.67%), Postives = 129/159 (81.13%), Query Frame = 1 
Query:   58 MNVVQEIQRINERELEAGLSGDASWHAKYKDSAWVFVGGLVTTLTEGDVLCVMSQWGEIEDINLVRDKATGKSKGFAFLKYEDQRSTILAVDNFNGIKLLDRTLRVDHCERYRLPKELKDKEEAEEE-EKIAEWRPGHAYEGKALASDLSVTKGVDLFA 531
            MNVV EIQR+NERELE  +   ASWH KY +SAWVFVGGL   L+EGDVLCV+SQ+GEIED++LVRD  TGKSKGFAF+K+EDQRST+LAVDN NG +LLDR LRVDH  +Y+LPKEL++  ++E+E E+     PGHAYEGK LASD  + +GVD+FA
Sbjct:    1 MNVVAEIQRLNERELELNVPLSASWHQKYLESAWVFVGGLPFELSEGDVLCVLSQFGEIEDLHLVRDGKTGKSKGFAFVKFEDQRSTVLAVDNLNGFRLLDRVLRVDHVLKYKLPKELQEDSDSEDEQERRPRGLPGHAYEGKELASDFDLQQGVDVFA 159
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BLAST of mRNA_P-wetherbeei_contig612.1.1 vs. uniprot
Match: A0A7S1C5P3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5P3_9STRA)

HSP 1 Score: 207 bits (528), Expect = 7.350e-63
Identity = 105/169 (62.13%), Postives = 130/169 (76.92%), Query Frame = 1 
Query:   58 MNVVQEIQRINERELEAGLSGDASWHAKYKDSAWVFVGGLVTTLTEGDVLCVMSQWGEIEDINLVRDKATGKSKGFAFLKYEDQRSTILAVDNFNGIKLLDRTLRVDHCERYRLPKELKDKEEAEEEE------KIAEWRPGHAYEGKALASDLSVTKGVDLFAVLPPS 546
            MNVV+EI+RINE EL AG+S  ASWHA+Y+ SAWV+VGGL + LTEGDV+CV SQWGEIED+ LVRD+ TGKSKGFAF+KYEDQRST+LAVDN NG KLL RTLRVDH   Y+ PK+ KD+++   E+      ++    PGHAY  K LAS  S+++GVD+FA   P+
Sbjct:    1 MNVVREIERINEEELRAGISESASWHARYRSSAWVYVGGLSSELTEGDVVCVFSQWGEIEDVVLVRDEETGKSKGFAFIKYEDQRSTVLAVDNGNGAKLLGRTLRVDHKLEYQAPKKKKDRKDGYNEDSSGDDDELKAHAPGHAYAEKELASGYSISRGVDVFAAPEPT 169
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig612.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YJH4_9STRA7.530e-7267.65RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3YEY6_HETAK3.150e-6968.26Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2RL84_9STRA6.130e-6764.50Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
D7FPK4_ECTSI8.380e-6766.67RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A4D9D1V2_9STRA2.220e-6666.86RRM domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A0P1A7U4_PLAHL8.440e-6665.66Rna-binding motif x-linked 2 n=1 Tax=Plasmopara ha... [more]
W2N0T6_PHYPR1.890e-6466.67RRM domain-containing protein n=11 Tax=Phytophthor... [more]
A0A2P4XM74_9STRA5.670e-6366.88U2 snRNP component IST3 n=1 Tax=Phytophthora palmi... [more]
A0A6A3KRR2_9STRA5.980e-6366.67RRM domain-containing protein n=2 Tax=Phytophthora... [more]
A0A7S1C5P3_9STRA7.350e-6362.13Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig612contigP-wetherbeei_contig612:1020..2512 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FPK4
Preferred nameRBMX2
PFAMsRRM_1,zf-CCCH
Model size1071
Max annot lvl2759|Eukaryota
KEGG koko:K07919,ko:K13107,ko:K14807
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000349,GO:0000375,GO:0000377,GO:0000393,GO:0000398,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005686,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006366,GO:0006396,GO:0006397,GO:0006401,GO:0006403,GO:0006405,GO:0006406,GO:0006417,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0007623,GO:0008104,GO:0008150,GO:0008152,GO:0008380,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009299,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0010638,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031503,GO:0031974,GO:0031981,GO:0032204,GO:0032206,GO:0032268,GO:0032270,GO:0032501,GO:0032774,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0034248,GO:0034250,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0042162,GO:0042752,GO:0042789,GO:0042886,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043487,GO:0043488,GO:0043565,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045184,GO:0045727,GO:0045893,GO:0045935,GO:0046483,GO:0046700,GO:0046907,GO:0048511,GO:0048518,GO:0048522,GO:0050657,GO:0050658,GO:0050789,GO:0050790,GO:0050794,GO:0051028,GO:0051052,GO:0051054,GO:0051128,GO:0051130,GO:0051168,GO:0051169,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051338,GO:0051347,GO:0051641,GO:0051649,GO:0051972,GO:0051973,GO:0060255,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070274,GO:0070727,GO:0071011,GO:0071013,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097167,GO:0097525,GO:0097659,GO:0120114,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902494,GO:1902680,GO:1903311,GO:1903506,GO:1903508,GO:1904353,GO:1904355,GO:1905661,GO:1905663,GO:1990904,GO:2000112,GO:2000278,GO:2000573,GO:2001141,GO:2001252
Exons3
Evalue1.37e-67
EggNOG OGsKOG0126@1|root,KOG0126@2759|Eukaryota
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-12_000920.1
EC3.6.4.13
DescriptionmRNA-containing ribonucleoprotein complex export from nucleus
Cds size1071
COG categoryL
BRITEko00000,ko01000,ko03009,ko03041,ko04031,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186889.6248145-CDS-P-wetherbeei_contig612:1019..16821683186889.6248145-CDS-P-wetherbeei_contig612:1019..1682Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig612 1020..1682 -
1683186889.6376123-CDS-P-wetherbeei_contig612:1862..19911683186889.6376123-CDS-P-wetherbeei_contig612:1862..1991Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig612 1863..1991 -
1683186889.6472008-CDS-P-wetherbeei_contig612:2233..25121683186889.6472008-CDS-P-wetherbeei_contig612:2233..2512Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig612 2234..2512 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig612.1.1prot_P-wetherbeei_contig612.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig612 1020..2512 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig612.1.1

>prot_P-wetherbeei_contig612.1.1 ID=prot_P-wetherbeei_contig612.1.1|Name=mRNA_P-wetherbeei_contig612.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=357bp
CGHRNARLLIRGDFLSARAMNVVQEIQRINERELEAGLSGDASWHAKYKD
SAWVFVGGLVTTLTEGDVLCVMSQWGEIEDINLVRDKATGKSKGFAFLKY
EDQRSTILAVDNFNGIKLLDRTLRVDHCERYRLPKELKDKEEAEEEEKIA
EWRPGHAYEGKALASDLSVTKGVDLFAVLPPSHPPAPQASSNGSEEEDNA
QRARKKHKRHKKEEKRGKHHKKKHKREKKEWRDGGKDDNDDESDGEFHNG
GGGGGEPEGREGGSGAIQEEWRRDVGGTLAAARAAAAADEAAPLDLGTAR
RPVNTGPVADWRGTLFGGRGGGRGGMGSGGRGGGSGSGGGGGGRGGGGDR
RGGNGK*
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mRNA from alignment at P-wetherbeei_contig612:1020..2512-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig612.1.1 ID=mRNA_P-wetherbeei_contig612.1.1|Name=mRNA_P-wetherbeei_contig612.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1493bp|location=Sequence derived from alignment at P-wetherbeei_contig612:1020..2512- (Phaeothamnion wetherbeei SAG_119_79)
TGTGGGCATAGGAATGCGCGGCTCCTAATCCGCGGCGACTTTCTCAGTGC
AAGGGCGATGAACGTCGTGCAGGAGATTCAGCGCATCAACGAGCGCGAGC
TGGAGGCTGGTCTGTCGGGAGACGCGTCCTGGCACGCCAAATACAAGGAC
AGCGCCTGGGTGTTTGTGGGCGGCCTCGTCACGACGTTGACCGAGGGCGA
CGTGCTCTGCGTGATGTCGCAGTGGGGCGAGATCGAGGACATTAACCTCG
TGCGGGACAAGGCCACGGGAAAATCAAAGGTCGGTAGCTTTGGTACGTCT
ATTTTCATCGTCCCCTTTTCCGCTTTTGCTTTCTGCTCCCTTTCTTGATC
CCCTTGGTTTCTCGTGGTCTCTATTCTCCTATTTGCCTCCATCTCGCTGT
TTGAGTGAGATGACTGCGGCAAGTATGTTTGTGCACAATCGTGGTCGAAC
TAGCTCTCGCTGTCGTTTAGCCTCCTTTGCTCGACTAATACCGAGTATGA
GTCAACCTTTTGCGGCCGCAGGGCTTTGCCTTTCTCAAGTATGAGGATCA
ACGAAGCACCATCCTCGCCGTCGACAACTTCAACGGCATCAAACTTCTCG
ACCGGACGCTGCGCGTCGACCACTGCGAGCGATACCGGCTGCCGAAAGAG
GTAAGTGCTGCTGCTGCGGCCCTGATTCATAACGGACTTCGGGCTGGTGG
AATGCTCCCCACTCTTTCATTTCTAGCTGCTGGTGCCGCCGCTTCGGCTC
TGCCGCATCGTCGCATTCACAACCATGGCTGCCGCATCTCGTGCCGGCCC
TTTTCTGCTGACACCAATCTCTCTATGCAGCTGAAAGATAAAGAAGAGGC
GGAGGAAGAAGAAAAGATCGCGGAATGGCGGCCCGGCCACGCCTACGAGG
GAAAAGCACTCGCCAGCGACCTCAGCGTCACCAAAGGAGTCGATCTGTTC
GCCGTGCTGCCGCCATCGCATCCGCCGGCGCCGCAGGCGTCGAGCAACGG
CTCCGAGGAGGAAGACAACGCCCAACGGGCGCGAAAGAAGCACAAGCGCC
ACAAAAAGGAGGAGAAGCGAGGGAAGCACCACAAGAAGAAGCACAAGCGG
GAAAAGAAGGAATGGCGAGACGGCGGCAAAGACGACAATGACGACGAAAG
CGATGGCGAATTCCACAACGGTGGCGGCGGCGGCGGCGAGCCGGAAGGCA
GGGAGGGCGGAAGCGGCGCGATTCAGGAGGAGTGGCGCCGCGACGTCGGC
GGGACTTTGGCGGCGGCTCGAGCGGCAGCAGCGGCTGACGAGGCGGCCCC
ACTCGACCTCGGGACGGCAAGACGGCCGGTTAACACTGGGCCGGTCGCGG
ACTGGAGAGGGACCCTGTTCGGCGGCCGAGGGGGCGGGCGCGGTGGCATG
GGCAGCGGCGGCCGCGGCGGCGGCAGCGGCAGCGGCGGCGGCGGCGGCGG
CAGGGGCGGTGGCGGGGACAGACGTGGCGGGAATGGAAAATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig612:1020..2512-

>mRNA_P-wetherbeei_contig612.1.1 ID=mRNA_P-wetherbeei_contig612.1.1|Name=mRNA_P-wetherbeei_contig612.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1071bp|location=Sequence derived from alignment at P-wetherbeei_contig612:1020..2512- (Phaeothamnion wetherbeei SAG_119_79)
TGTGGGCATAGGAATGCGCGGCTCCTAATCCGCGGCGACTTTCTCAGTGC
AAGGGCGATGAACGTCGTGCAGGAGATTCAGCGCATCAACGAGCGCGAGC
TGGAGGCTGGTCTGTCGGGAGACGCGTCCTGGCACGCCAAATACAAGGAC
AGCGCCTGGGTGTTTGTGGGCGGCCTCGTCACGACGTTGACCGAGGGCGA
CGTGCTCTGCGTGATGTCGCAGTGGGGCGAGATCGAGGACATTAACCTCG
TGCGGGACAAGGCCACGGGAAAATCAAAGGGCTTTGCCTTTCTCAAGTAT
GAGGATCAACGAAGCACCATCCTCGCCGTCGACAACTTCAACGGCATCAA
ACTTCTCGACCGGACGCTGCGCGTCGACCACTGCGAGCGATACCGGCTGC
CGAAAGAGCTGAAAGATAAAGAAGAGGCGGAGGAAGAAGAAAAGATCGCG
GAATGGCGGCCCGGCCACGCCTACGAGGGAAAAGCACTCGCCAGCGACCT
CAGCGTCACCAAAGGAGTCGATCTGTTCGCCGTGCTGCCGCCATCGCATC
CGCCGGCGCCGCAGGCGTCGAGCAACGGCTCCGAGGAGGAAGACAACGCC
CAACGGGCGCGAAAGAAGCACAAGCGCCACAAAAAGGAGGAGAAGCGAGG
GAAGCACCACAAGAAGAAGCACAAGCGGGAAAAGAAGGAATGGCGAGACG
GCGGCAAAGACGACAATGACGACGAAAGCGATGGCGAATTCCACAACGGT
GGCGGCGGCGGCGGCGAGCCGGAAGGCAGGGAGGGCGGAAGCGGCGCGAT
TCAGGAGGAGTGGCGCCGCGACGTCGGCGGGACTTTGGCGGCGGCTCGAG
CGGCAGCAGCGGCTGACGAGGCGGCCCCACTCGACCTCGGGACGGCAAGA
CGGCCGGTTAACACTGGGCCGGTCGCGGACTGGAGAGGGACCCTGTTCGG
CGGCCGAGGGGGCGGGCGCGGTGGCATGGGCAGCGGCGGCCGCGGCGGCG
GCAGCGGCAGCGGCGGCGGCGGCGGCGGCAGGGGCGGTGGCGGGGACAGA
CGTGGCGGGAATGGAAAATGA
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