prot_P-wetherbeei_contig6115.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6115.1.1
Unique Nameprot_P-wetherbeei_contig6115.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length108
Homology
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BLAST of mRNA_P-wetherbeei_contig6115.1.1 vs. uniprot
Match: A0A7S2M6M4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M6M4_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.260e-12
Identity = 31/73 (42.47%), Postives = 47/73 (64.38%), Query Frame = 0 
Query:   28 RWTCCGATSEDAPGCMAAPHVPKEMMVSIRARGGPPVLVGSQRVSVFQHLEMNIFPSTQYRLAIQMTRGVAML 100
            +WTCC A + +APGC  APH  KE    +R    PPV+ G   +S++ HLE+NIFPS  + L +Q+++ ++ L
Sbjct:  360 KWTCCQARASNAPGCKTAPHTGKERTAVVRVEALPPVVEG---ISLYSHLEVNIFPSVPHTLRVQISKSISRL 429
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BLAST of mRNA_P-wetherbeei_contig6115.1.1 vs. uniprot
Match: A0A7S2UCF0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCF0_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.020e-9
Identity = 30/78 (38.46%), Postives = 44/78 (56.41%), Query Frame = 0 
Query:   28 RWTCCGATSEDAPGCMAAPHVPKEMMVSIRARGGPPVLVGSQRVSVFQHLEMNIFPSTQYRLAIQMTRGVAMLLRRYF 105
            RW+CC A  E APGC + PH  +E  V IR    P  + G   ++++ H E+NI+PS  + + +QMT  +  L   YF
Sbjct: 2316 RWSCCHARWEGAPGCRSRPHTGQERAVDIRVESMPRTVEG---LTMYNHFEINIYPSVPHTIIVQMTNALGKLFIAYF 2390
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6115.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2M6M4_9STRA3.260e-1242.47Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S2UCF0_9STRA1.020e-938.46Hypothetical protein n=1 Tax=Attheya septentrional... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001562Zinc finger, Btk motifPFAMPF00779BTKcoord: 28..43
e-value: 4.5E-5
score: 23.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6115contigP-wetherbeei_contig6115:78..506 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6115.1.1mRNA_P-wetherbeei_contig6115.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6115 78..506 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6115.1.1 ID=prot_P-wetherbeei_contig6115.1.1|Name=mRNA_P-wetherbeei_contig6115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=108bp
SVGGGGVGGFSGSGSGDDGKGGSGESCRWTCCGATSEDAPGCMAAPHVPK
EMMVSIRARGGPPVLVGSQRVSVFQHLEMNIFPSTQYRLAIQMTRGVAML
LRRYFCLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001562Znf_Btk_motif