mRNA_P-wetherbeei_contig6111.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6111.3.1 vs. uniprot
Match: A0A7S2WSD0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSD0_9STRA) HSP 1 Score: 109 bits (273), Expect = 5.190e-22 Identity = 103/280 (36.79%), Postives = 146/280 (52.14%), Query Frame = 3
Query: 309 AVDLRLFTGDARLLLDEAVHAAAFGEATSLGRPFHV-PCKMTPAALAAFAGSEYAAGRMVLAGAGVPLQELVALGEAHFGAAPTGGSEATVPSPYVGGDARVKAEGPATHVAVAFSGAAAGSKDAAAAAVLXXXXXXXXXXXXXXXXXXXXXXXXADAGVFGTIGAAPPAGVPALVDAMCAALKSLAATEAAPAELAAAVAVTRVGMLAALEQPGAAVAALAASVXAGADPAAADGRSVMSVTAGAAKALAAAMLKTPVSVACVGETVVVPSRAAIAKKF 1145
A +L + D + LL EA+H AAFG+ T +GR F++ P ++ L A+ Y A M + GAGVP +LV+L E FG+ G P+ YVGG A VKA+ P THVA+ F+GAA GS DAA AVL +D+G+ G GAA PA AL + AA+K++ A + A A AA +AV ++A+ E A LAA++ GA D +V+A + KALA+ ++K+P + A VG +PS + F
Sbjct: 163 AFELATQSTDPQTLLTEALHEAAFGDETPMGRTFYMDPKGISAEHLVAYRAGLYTAENMTVVGAGVPHDQLVSLSECFFGSVAKGTGSKPPPASYVGGAAAVKADAPLTHVALGFNGAAVGSADAATVAVLKELLSHAVTSPSAAAFNITY----SDSGLVGLYGAADPAAAGALTEDFVAAVKAMTAVDDA-AVGAAKLAVKTQTLVASQES-----ATLAANLATGAAVTGVD-----AVSAASVKALASKLVKSPPAFASVGPRYGLPSYNTLTAMF 427
BLAST of mRNA_P-wetherbeei_contig6111.3.1 vs. uniprot
Match: D8LCU2_ECTSI (Mitochondrial Processing Peptidase alpha subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCU2_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 4.450e-15 Identity = 97/289 (33.56%), Postives = 143/289 (49.48%), Query Frame = 3
Query: 270 PTKMTNAN*AKVDAVDLRLFTGDARLLLDEAVHAAAFGEATSLGRPFHVPCKMTPA-ALAAFAGSEYAAGRMVLAGAGVPLQELVALGEAHFGAAPTGGSEATVPSPYVGGDARVKAEGPATHVAVAFSGAAAGSKDAAAAAVLXXXXXXXXXXXXXXXXXXXXXXXXADAGVFGTIGAAPPAGVPALVDAMCAALKSLAATEAAPAELAAAVAVTRVGMLAALEQPGAAVAALAASVXAGADPAAADGRSVMSVTAGAAKALAAAMLKTPVSVACVGETVVVPSRAAI 1133
P ++++A+ AK+ + L+ +D+A+HAAAFG+A SLG+P A L F G+ Y A + + G VP ++ + EA AA + A P+ YVGG+ RVK++ +T V++AF AA DA+A A DAG+ G G P AL A+ + LA A+ AE+A+A+A +V +E+P A+ ALA S G DPA A ++ VTA A K AAA +K+ +S+A VG VP +A I
Sbjct: 165 PWEISDAS-AKLSEIILQRHGESTAEQVDDALHAAAFGDAFSLGKPLTPGLSSLSADGLKEFRGARYKAPGITVIGVNVPHEDFKSQAEAALEAADSSAPAARSPAKYVGGELRVKSDVGSTSVSMAF--AAPSGSDASAPAYEVLGALLGARAAAAAPSASGFSVSYTDAGLVGVTGTCPDGQAGALSQALASCFSGLAT--ASNAEVASAIASAKVSRALKMEKPLYALLALADSASVGTDPAKA-ATALDGVTAAAVKKAAAAAIKSGMSMASVGNISEVPQKAEI 447
BLAST of mRNA_P-wetherbeei_contig6111.3.1 vs. uniprot
Match: A0A4D9D8T2_9STRA (Peptidase_M16 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8T2_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.130e-9 Identity = 50/131 (38.17%), Postives = 70/131 (53.44%), Query Frame = 3
Query: 309 AVDLRLFTGDARLLLDEAVHAAAFGEATSLGRP-FHVPCKMTPAALAAFAGSEYAAGRMVLAGAGVPLQELVALGEAHFGAAPTGGSEATVPSPYVGGDARVKAEGPATHVAVAFSGAAAGSKDAAAAAVL 698
A D+ F DARL L EA++ AA+GE T LG P +H+ ++T +LA + Y A + + G GV +L + G S+A SPY+GG+AR+KA +T V +AF A KDA VL
Sbjct: 179 AADMETFAADARLQLGEALYEAAYGENTPLGHPLYHLGSQLTAGSLATYRAKTYGANSITVFGTGVAHAQLASWATRLADGLAPGSSKAAPASPYIGGEARLKATSDSTFVGLAFC--APDGKDAGVLEVL 307
BLAST of mRNA_P-wetherbeei_contig6111.3.1 vs. uniprot
Match: G5AFD5_PHYSP (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=G5AFD5_PHYSP) HSP 1 Score: 71.6 bits (174), Expect = 1.600e-9 Identity = 92/285 (32.28%), Postives = 120/285 (42.11%), Query Frame = 3
Query: 300 KVDAVDLRLFTGDARLLLDEAVHAAAFGEATSLGRPFHVPCKM---TPAALAAFAGSEYAAGRMVLAGAGVPLQELVALGEAHFGAAPTGGSEATVPSPYVGGDARVKAEGPATHVAVAFSGAAAGSKDAAAAAVLXXXXXXXXXXXXXXXXXXXXXXXXADAGVFGTIGAAPPAGVPALVDAMCAALKSLAATEAAPAELAAAVAVTRVGMLAALEQPGAAVAALAASVXAGADPAAADGRSVMSVTAGAAKALAAAMLKTPVSVACVGETVVVPSRAAIAKKF 1145
KV + DA L E +HAAAF + +LGRP + +P L A+ L GAGV L L A+FG G A+ + YVGG+ RVK G THVA+A S D A+ VL +DA + G G A P+ ALVD+ A LK A+ A ELAAA L ALEQ ++ + + G P +A V V+A + LA LK SVA +G+ VP A+A K
Sbjct: 167 KVVQAEFEKIAEDASASLLEGIHAAAFYDDVTLGRPLVAAENLGALSPETLFAYYDKYVNTANAALVGAGVAHNTLTDLANAYFGDLTKGSKAASATAKYVGGETRVKKNGKFTHVALALPTVGRDSADFGASQVLRALLSLRLNNKKASAFLSSY----SDAALVGLSGYAAPSEAGALVDSFAAQLKKAASAPATKEELAAA---KTTAALEALEQQST-LSRVGLAATTGVVPKSAS-ELVEGVSAAKLQELAQKALKATPSVAAIGKLSTVPHVDAVASKL 442
BLAST of mRNA_P-wetherbeei_contig6111.3.1 vs. uniprot
Match: W7U357_9STRA (Mitochondrial-processing peptidase alpha subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U357_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 5.810e-9 Identity = 44/115 (38.26%), Postives = 64/115 (55.65%), Query Frame = 3
Query: 309 AVDLRLFTGDARLLLDEAVHAAAFGEATSLGRP-FHVPCKMTPAALAAFAGSEYAAGRMVLAGAGVPLQELVALGEAHFGAAPTGGSEATVPSPYVGGDARVKAEGPATHVAVAF 650
A D+ F DARL L EA++ AA+GE T LG P +H+ ++T +LAA+ Y A + + G GV +L + G S+A SPY+GG+AR+KA +T V +A
Sbjct: 180 AADMETFAADARLQLGEALYEAAYGENTPLGHPLYHLGSQLTAGSLAAYRAKTYGANFITVFGTGVAHAQLASWATRLADGLAPGSSKAAPASPYIGGEARLKATSDSTFVGLAL 294
BLAST of mRNA_P-wetherbeei_contig6111.3.1 vs. uniprot
Match: A0A5D6XKE3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKE3_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 6.070e-7 Identity = 89/282 (31.56%), Postives = 121/282 (42.91%), Query Frame = 3
Query: 315 DLRLFTGDARLLLDEAVHAAAFGEATSLGRPF---HVPCKMTPAALAAFAGSEYAAGRMVLAGAGVPLQELVALGEAHFGAAPTGGSEATVPSPYVGGDARVKAEGPATHVAVAFSGAAAGSKDA--AAAAVLXXXXXXXXXXXXXXXXXXXXXXXXADAGVFGTIGAAPPAGVPALVDAMCAALKSLAATEAAPAELAAAVAVTRVGMLAALEQPGAAVAALAASVXAGADPAAADGRSVMSVTAGAAKALAAAMLKTPVSVACVGETVVVPSRAAIAKKF 1145
+L L G L+ E VHAAAF + SLGRP K L F + + + G+G+ +L L ++F P G + + YVGG++RVK P THVA+ F G +DA +A VL D G+ G G A A V ALVD+ A +KSLA T + ELA A V + +L+ + A AL + PA A S TA + + LA L + SVA VG+ VP A+ K
Sbjct: 175 ELELLAGSPSSLVAEGVHAAAFYDDVSLGRPLVSVENLAKFGAEDLWKFYETYVNSANAAVFGSGIEHSDLANLVGSYFSDLPAGSAAPHAAAKYVGGESRVKTAAPVTHVALGFE--TVGKRDALYGSAHVLRAVLAGRLNAKFASAFYTPYI----DGGLVGFSGHAANADVGALVDSFAAEIKSLATTSVSAEELAVAKTVASLNILSTIGSRNGAT-ALVGLLGVVQAPAPAPLSLAESATAKSVQELAKRALASRPSVASVGKVSAVPHVDALIAKL 449
BLAST of mRNA_P-wetherbeei_contig6111.3.1 vs. uniprot
Match: H3GHN9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHN9_PHYRM) HSP 1 Score: 62.0 bits (149), Expect = 1.960e-6 Identity = 92/279 (32.97%), Postives = 115/279 (41.22%), Query Frame = 3
Query: 336 DARLLLDEAVHAAAFGEATSLGRPFHVPCKM---TPAALAAFAGSEYAAGRMVLAGAGVPLQELVALGEAHFGAAPTGGSEATVPSPYVGGDARVKAEGPATHVAVAFSGAAAGSKDAAAAAVLXXXXXXXXXXXXXXXXXXXXXXXXADAGVFGTIGAAPPAGVPALVDAMCAALKSLAATEAAPAELAAAVAVTRVGMLAALEQPGAA------VAALAASVXAGADPAAADGRSVMSVTAGAAKALAAAMLKTPVSVACVGETVVVPSRAAIAKKF 1145
DA L E +HAAAF E +LGRP + +P AL AF L GAGV L L +FG+ G A+ + YVGG+ RVK THVA+A S D A+ VL +DA + G G A + ALVD+ A LK A+ A ELAAA L ALEQ V +A + P+A V VTA + LA LK SVA +G+ VP A+A K
Sbjct: 202 DASASLLEGLHAAAFYEDLTLGRPVAAADNLQALSPEALWAFHDKYVNTANAALVGAGVNHSTLTDLANEYFGSFAKGVEAASATAKYVGGETRVKKAAKFTHVALALPTVGRDSADFGASQVLRALLSLRLNNKKASAFLSSY----SDAALVGLSGYAVHSEAGALVDSFAAELKKAASAPATKEELAAA---KTTAALEALEQYSTQTGTLGRVGLIATTGFVSQSPSAL----VEGVTAAKLQELAQKALKATPSVAAIGKLSAVPHVDAVANKL 469
BLAST of mRNA_P-wetherbeei_contig6111.3.1 vs. uniprot
Match: A0A6A3NAN3_9STRA (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NAN3_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 3.260e-6 Identity = 67/204 (32.84%), Postives = 83/204 (40.69%), Query Frame = 3
Query: 300 KVDAVDLRLFTGDARLLLDEAVHAAAFGEATSLGRPFHVPCK---MTPAALAAFAGSEYAAGRMVLAGAGVPLQELVALGEAHFGAAPTGGSEATVPSPYVGGDARVKAEGPATHVAVAFSGAAAGSKDAAAAAVLXXXXXXXXXXXXXXXXXXXXXXXXADAGVFGTIGAAPPAGVPALVDAMCAALKSLAATEAAPAELAAA 902
KV + DA L E +HAAAF +LGRP + P L A+ L GAGV L L A+FG G A+ + YVGG+ RVK G THVA+A S D A+ VL +DA + G G A P+ LVD+ A LK A+ A ELAAA
Sbjct: 167 KVVQAEFEKIAEDASASLLEGIHAAAFYNDVTLGRPLVAAENVGALIPETLWAYYDKYVNTSNAALVGAGVAHNTLTDLANAYFGDFAKGSKAASAAAKYVGGETRVKKNGKFTHVALALPTGGHDSADFGASQVLRALLSLRLNNKKASAFLASY----SDAALVGLSGYAAPSEAGTLVDSFAAELKKAASAPATKEELAAA 366
BLAST of mRNA_P-wetherbeei_contig6111.3.1 vs. uniprot
Match: A0A7S2SMW1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SMW1_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 4.610e-6 Identity = 45/123 (36.59%), Postives = 64/123 (52.03%), Query Frame = 3
Query: 300 KVDAVDLRLFTGDARLLLDEAVHAAAFGEATSLGRPFHVP----CKMTPAALAAFAGSEYAAGRMVLAGAGVPLQELVALGEAHFGAAPTGGSEATVP--SPYVGGDARVKAEGPATHVAVAF 650
KV + +L + + +L E AA+G+ + LGRP P K++ L F S +AA RMVL+ +GV Q LV +FG P+ + V S Y GGD R+ A+ P THVA+ F
Sbjct: 169 KVISYELDDMNSNPQAVLTELFQEAAYGQQSPLGRPLWCPKRNLSKISSQDLIDFRNSTFAANRMVLSASGVDHQTLVDFAGKYFGDLPSSPANPAVSEKSVYRGGDRRISADSPLTHVAMCF 291
BLAST of mRNA_P-wetherbeei_contig6111.3.1 vs. uniprot
Match: A0A388LQW3_CHABU (Mitochondrial-processing peptidase subunit alpha n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LQW3_CHABU) HSP 1 Score: 59.3 bits (142), Expect = 1.520e-5 Identity = 50/123 (40.65%), Postives = 66/123 (53.66%), Query Frame = 3
Query: 348 LLDEAVHAAAFGEATSLGRPFHVP----CKMTPAALAAFAGSEYAAGRMVLAGAGVPLQELVALGEAHFGAAPTGGSEATVPSPYVGGDARVKAEGPATHVAVAFS--GAAAGSKDAAAAAVL 698
L+ EA+H+A G A +LGRP P ++ AA F + Y A RMVLA +GV +L+A+ E F P T + YVGGD R+ A+ P THVA+ F G KDA A +VL
Sbjct: 230 LMVEALHSA--GYAGALGRPLLCPESNVGRLDSAACREFVEANYTAPRMVLAASGVDHSDLLAVAEPLFSDLPKVALPPTPLTEYVGGDWRLAADAPVTHVALGFEFPGGWRNEKDAVAISVL 350 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6111.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6111.3.1 >prot_P-wetherbeei_contig6111.3.1 ID=prot_P-wetherbeei_contig6111.3.1|Name=mRNA_P-wetherbeei_contig6111.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=241bp MTPAALAAFAGSEYAAGRMVLAGAGVPLQELVALGEAHFGAAPTGGSEATback to top mRNA from alignment at P-wetherbeei_contig6111:1706..3563- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6111.3.1 ID=mRNA_P-wetherbeei_contig6111.3.1|Name=mRNA_P-wetherbeei_contig6111.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1858bp|location=Sequence derived from alignment at P-wetherbeei_contig6111:1706..3563- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6111:1706..3563- >mRNA_P-wetherbeei_contig6111.3.1 ID=mRNA_P-wetherbeei_contig6111.3.1|Name=mRNA_P-wetherbeei_contig6111.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=723bp|location=Sequence derived from alignment at P-wetherbeei_contig6111:1706..3563- (Phaeothamnion wetherbeei SAG_119_79)back to top |