mRNA_P-wetherbeei_contig6106.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6106.1.2
Unique NamemRNA_P-wetherbeei_contig6106.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6106.1.2 vs. uniprot
Match: A0A6H5JS11_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JS11_9PHAE)

HSP 1 Score: 437 bits (1125), Expect = 1.880e-150
Identity = 224/314 (71.34%), Postives = 255/314 (81.21%), Query Frame = 1
Query:    1 AEEVGPKVRTMDANCKMDSAVISGLFENGLMGVEAPVEHGGSGLSFMSACIVIEELAKVDPAVAVLVDIHNTLTINLMRQLGESFTQQARYLPCLSTDTVSSFCLSEPGSGSDAFALTTRAVLSADGSHYTIDGQKMWISNAEEAGIFLVFATVDPAAGYKGITCFIVEKEFGGVEVGPKEEKLGIRASSTCPVAFSGCRVPAENVLGQVGKGYRYAIESLNEGRIGIGAQMVGLARGCLDHTMRYLFERRQFGSFIGDFQGMQHQYAQVATEIEAARCLMVHAIRLKETGQPFVKEAAMTKLLTSQVGRYSYS 942
            A+ +GP+VR MD    MD AV+SGLFE+GLMGVEAP E GGSGL+FMSACIV+EE+AKVDPAVAVLVDI NTL  N++R  G    Q+ +Y P L + +VSSFCLSE GSGSDAF+L T+A LS D S+YTI+G+K WISNAE+A +F VFA VDP+ GYKGITCFIVEK FGGV VGPKEEKLGIRASSTCPV FSGC VPA NVLG+VG+GYRYAIE LNEGRIGIGAQM GLA GCL  T+ YLFER+QFG F+GDFQGMQHQ AQ ATE+EAA  L   A R+KE GQPFVKEAAM+KL TSQV   + S
Sbjct:   46 ADVIGPRVRDMDTESTMDPAVVSGLFEHGLMGVEAPEEFGGSGLNFMSACIVVEEVAKVDPAVAVLVDIQNTLISNMLRFWGSRELQE-KYFPKLCSGSVSSFCLSEVGSGSDAFSLATKATLSPDRSYYTIEGEKQWISNAEQAELFFVFANVDPSKGYKGITCFIVEKGFGGVTVGPKEEKLGIRASSTCPVTFSGCEVPATNVLGEVGQGYRYAIEILNEGRIGIGAQMAGLAEGCLSATVPYLFERKQFGGFVGDFQGMQHQVAQAATEVEAASALYRSAARMKEAGQPFVKEAAMSKLYTSQVAERTAS 358          
BLAST of mRNA_P-wetherbeei_contig6106.1.2 vs. uniprot
Match: A0A835ZGF4_9STRA (Acyl-CoA dehydrogenase/oxidase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGF4_9STRA)

HSP 1 Score: 416 bits (1069), Expect = 2.370e-142
Identity = 218/310 (70.32%), Postives = 250/310 (80.65%), Query Frame = 1
Query:   10 VGPKVRTMDANCKMDSAVISGLFENGLMGVEAPVEHGGSGLSFMSACIVIEELAKVDPAVAVLVDIH--NTLTINLMRQLGESFTQQARYLPCLSTDTVSSFCLSEPGSGSDAFALTTRAVLSADGSHYTIDGQKMWISNAEEAGIFLVFATVDPAAGYKGITCFIVEKEF--GGVEVGPKEEKLGIRASSTCPVAFSGCRVPAENVLGQVGKGYRYAIESLNEGRIGIGAQMVGLARGCLDHTMRYLFERRQFGSFIGDFQGMQHQYAQVATEIEAARCLMVHAIRLKET-GQPFVKEAAMTKLLTSQV 924
            + P+VR MD   KMD AV+SGLFENGLM VE P EHGGSGL F+SAC+VIEE+AKVDPAVAVLVDI   NTL  N++R  G    QQA+Y P L   TV+SFCLSEPGSGSDAFAL T A  SADGS+YTI+G K WISNAE+AG+F VFATVD  AGY+GITCFIV+KE   GG+ VG KE+KLGIRASSTCPV F  C+VPAENVLGQVG+GY+YAI+ LNEGRIGIGAQMVGL+ GC +H M YLFER+QFG+ IGDFQ +QHQYAQ+AT+IEAAR L     R+K + G PFVK+AAMTKL TSQV
Sbjct:   19 IKPRVRDMDDASKMDPAVLSGLFENGLMSVEVPTEHGGSGLGFVSACLVIEEIAKVDPAVAVLVDIQATNTLLNNMLRFWGTP-EQQAKYFPLLGHGTVASFCLSEPGSGSDAFALATTATRSADGSYYTIEGAKSWISNAEQAGVFFVFATVDRGAGYRGITCFIVDKEVSNGGISVGRKEDKLGIRASSTCPVTFHDCKVPAENVLGQVGQGYKYAIQILNEGRIGIGAQMVGLSLGCFEHVMPYLFERKQFGTHIGDFQAVQHQYAQMATDIEAARQLTYATARMKASAGLPFVKQAAMTKLFTSQV 327          
BLAST of mRNA_P-wetherbeei_contig6106.1.2 vs. uniprot
Match: A0A0P1AWH5_PLAHL (Short branched chain specific acyl-mitochondrial n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWH5_PLAHL)

HSP 1 Score: 379 bits (973), Expect = 2.380e-127
Identity = 191/314 (60.83%), Postives = 242/314 (77.07%), Query Frame = 1
Query:    1 AEEVGPKVRTMDANCKMDSAVISGLFENGLMGVEAPVEHGGSGLSFMSACIVIEELAKVDPAVAVLVDIHNTLTINLMRQLGESFTQQARYLPCLSTDTVSSFCLSEPGSGSDAFALTTRAVLSADGSHYTIDGQKMWISNAEEAGIFLVFATVDPAAGYKGITCFIVEKEFGGVEVGPKEEKLGIRASSTCPVAFSGCRVPAENVLGQVGKGYRYAIESLNEGRIGIGAQMVGLARGCLDHTMRYLFERRQFGSFIGDFQGMQHQYAQVATEIEAARCLMVHAIRLKETGQPFVKEAAMTKLLTSQVGRYSYS 942
            A+ V P VR MD+  +MD  +  GLFENGL+ VE P ++GGSG SFMS C+ IEEL+KVDP V +LVD+ NT+  N+    G    Q+ +YLP LSTD + SFCLSE GSGSDAFAL T+A  SADGS+Y+I GQKMWISNAE +G++LVFATVDP+ GYKGITCFIV+++  G+E+G  EEKLGI ASSTCPV  +  +VP EN++G+VGKGY+ AI +LNEGRIGI +QM+GLA+G  D T+ YLFER+QFGS IG+FQ +QHQYA+ A +IE AR L+ +A RLK++GQPFVK+AAM KL  S+V   + S
Sbjct:   49 ADVVAPHVRAMDSAGEMDHTITRGLFENGLLAVEIPADYGGSGASFMSLCLTIEELSKVDPVVGLLVDLQNTVVNNVFLMHGTE-GQKEKYLPRLSTDMIGSFCLSEAGSGSDAFALKTKAEASADGSYYSITGQKMWISNAEYSGVYLVFATVDPSRGYKGITCFIVDRDTEGLEIGKPEEKLGICASSTCPVTLTDVKVPKENIMGEVGKGYKIAISTLNEGRIGIASQMLGLAQGVYDQTLPYLFERQQFGSPIGEFQAVQHQYAEAALDIEMARLLVYNAARLKDSGQPFVKQAAMAKLHASRVAEKTAS 361          
BLAST of mRNA_P-wetherbeei_contig6106.1.2 vs. uniprot
Match: A0A7S1S3N8_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1S3N8_ALECA)

HSP 1 Score: 380 bits (976), Expect = 2.990e-127
Identity = 195/295 (66.10%), Postives = 232/295 (78.64%), Query Frame = 1
Query:    1 AEEVGPKVRTMDANCKMDSAVISGLFENGLMGVEAPVEHGGSGLSFMSACIVIEELAKVDPAVAVLVDIHNTLTINLMRQLGESFTQQARYLPCLSTDTVSSFCLSEPGSGSDAFALTTRAVLSADGSHYTIDGQKMWISNAEEAGIFLVFATVDPAAGYKGITCFIVEKEFGGVEVGPKEEKLGIRASSTCPVAFSGCRVPAENVLGQVGKGYRYAIESLNEGRIGIGAQMVGLARGCLDHTMRYLFERRQFGSFIGDFQGMQHQYAQVATEIEAARCLMVHAIRLKETGQPFV 885
            A+ V PKV+ MDA   MD  +I+ LFENGLMGVE P  +GG+G SF + C+VIEELAKVDPAVA  VD+H+T+  N +   G S   +A+YLP L+T+ + SFCLSE GSGSDAF+LTTRAV SADGS YTI GQK+WI+NA  AG+FLVFA VDP+ GYKGITCF+VE++  G+ VGP E+KLGIRASSTCPV   G +VP E +LG+VG+GY+YAI  LNEGRIGIGAQMVGLA+GC D TM YLFERRQFG  IGDFQ MQ QYA VA EIE+AR L+ +A R+KE GQPFV
Sbjct:   88 ADIVAPKVKEMDATSTMDPGLIAALFENGLMGVEVPEAYGGAGASFTAMCLVIEELAKVDPAVAACVDVHSTVVNNTIGFWG-SEEIKAQYLPKLATEFMGSFCLSEAGSGSDAFSLTTRAVPSADGSFYTITGQKLWITNAGNAGVFLVFANVDPSKGYKGITCFVVERDSEGLTVGPHEDKLGIRASSTCPVILEGVKVPTERILGEVGQGYKYAIGILNEGRIGIGAQMVGLAQGCFDATMPYLFERRQFGERIGDFQAMQMQYADVAMEIESARMLVYNAARMKEAGQPFV 381          
BLAST of mRNA_P-wetherbeei_contig6106.1.2 vs. uniprot
Match: A0A225UWA3_9STRA (Acyl-CoA dehydrogenase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A225UWA3_9STRA)

HSP 1 Score: 376 bits (966), Expect = 2.560e-126
Identity = 190/314 (60.51%), Postives = 239/314 (76.11%), Query Frame = 1
Query:    1 AEEVGPKVRTMDANCKMDSAVISGLFENGLMGVEAPVEHGGSGLSFMSACIVIEELAKVDPAVAVLVDIHNTLTINLMRQLGESFTQQARYLPCLSTDTVSSFCLSEPGSGSDAFALTTRAVLSADGSHYTIDGQKMWISNAEEAGIFLVFATVDPAAGYKGITCFIVEKEFGGVEVGPKEEKLGIRASSTCPVAFSGCRVPAENVLGQVGKGYRYAIESLNEGRIGIGAQMVGLARGCLDHTMRYLFERRQFGSFIGDFQGMQHQYAQVATEIEAARCLMVHAIRLKETGQPFVKEAAMTKLLTSQVGRYSYS 942
            A+ V P VR MD   +MD  +  GLFENGL+ VE P ++GGS  SFMS C+ IEEL+KVDP V +LVD+ NT+  N+    G    Q+ +YLP LSTD + SFCLSE GSGSDAFAL T+A +SADGS+Y++ GQKMWISNAE +G++LVFA VD + GYKGITCFIV++E  G+E+G  EEKLGIRASSTCPV  +  +VP EN+LG++GKGY+ AI +LNEGRIGI +QM+GLA+G  D T+ YLFER+QFGS IG+FQ MQHQYA+ A +IE AR L+ +A RLK+ GQPFVK+AAM KL  S+V   + S
Sbjct:   47 ADVVAPNVRAMDTAGEMDHTITRGLFENGLLSVEIPADYGGSEASFMSLCLTIEELSKVDPVVGLLVDLQNTVVNNVFLVHGTE-EQKQKYLPRLSTDMIGSFCLSEAGSGSDAFALKTKAEVSADGSYYSLTGQKMWISNAEYSGVYLVFANVDLSKGYKGITCFIVDREMDGLEIGKPEEKLGIRASSTCPVTLTDVKVPKENILGELGKGYKIAISTLNEGRIGIASQMLGLAQGVYDQTLPYLFERQQFGSPIGEFQAMQHQYAEAALDIETARLLVYNAARLKDAGQPFVKQAAMAKLHASRVAEKTAS 359          
BLAST of mRNA_P-wetherbeei_contig6106.1.2 vs. uniprot
Match: A0A8K1FNP6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNP6_PYTOL)

HSP 1 Score: 375 bits (963), Expect = 1.270e-125
Identity = 188/314 (59.87%), Postives = 243/314 (77.39%), Query Frame = 1
Query:    1 AEEVGPKVRTMDANCKMDSAVISGLFENGLMGVEAPVEHGGSGLSFMSACIVIEELAKVDPAVAVLVDIHNTLTINLMRQLGESFTQQARYLPCLSTDTVSSFCLSEPGSGSDAFALTTRAVLSADGSHYTIDGQKMWISNAEEAGIFLVFATVDPAAGYKGITCFIVEKEFGGVEVGPKEEKLGIRASSTCPVAFSGCRVPAENVLGQVGKGYRYAIESLNEGRIGIGAQMVGLARGCLDHTMRYLFERRQFGSFIGDFQGMQHQYAQVATEIEAARCLMVHAIRLKETGQPFVKEAAMTKLLTSQVGRYSYS 942
            A+ V P+V++MD   +MD  +  GLFENGLM +E P E+GG+  SFM+  I IEEL+KVDP++ +LVD+ NT+  N+    G    Q+  YLP LSTDTV SFCL+E GSGSDAFAL TRA +SADGS+YT++GQKMWISNAE AG+++VFA VDP+ GYKGITCFIV+++  G+E+G  E+KLGIRASSTCPV+F+  +VP E ++G+VGKGY+ AI +LNEGRIGI +QM+GLA+G  D T+ YLF+R QFGS IGDFQ MQHQYA+ A EIE+AR L+ +A RLK+ G PFVK+AAM KL  S++   + S
Sbjct:   64 ADMVYPRVQSMDQAGEMDHEITRGLFENGLMSIEIPAEYGGTEASFMNLAITIEELSKVDPSIGLLVDLQNTVVNNVFVLNGNE-EQKQEYLPRLSTDTVGSFCLTEAGSGSDAFALKTRAEVSADGSYYTLNGQKMWISNAEYAGVYIVFANVDPSKGYKGITCFIVDRDSEGLEIGKPEDKLGIRASSTCPVSFNNVKVPKEKIMGEVGKGYKIAISTLNEGRIGIASQMLGLAQGVYDQTIPYLFDRHQFGSPIGDFQAMQHQYAEAALEIESARLLVYNAARLKDAGLPFVKQAAMAKLHASRIAEKTAS 376          
BLAST of mRNA_P-wetherbeei_contig6106.1.2 vs. uniprot
Match: A0A8K1FKI5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKI5_PYTOL)

HSP 1 Score: 374 bits (961), Expect = 2.560e-125
Identity = 188/314 (59.87%), Postives = 238/314 (75.80%), Query Frame = 1
Query:    1 AEEVGPKVRTMDANCKMDSAVISGLFENGLMGVEAPVEHGGSGLSFMSACIVIEELAKVDPAVAVLVDIHNTLTINLMRQLGESFTQQARYLPCLSTDTVSSFCLSEPGSGSDAFALTTRAVLSADGSHYTIDGQKMWISNAEEAGIFLVFATVDPAAGYKGITCFIVEKEFGGVEVGPKEEKLGIRASSTCPVAFSGCRVPAENVLGQVGKGYRYAIESLNEGRIGIGAQMVGLARGCLDHTMRYLFERRQFGSFIGDFQGMQHQYAQVATEIEAARCLMVHAIRLKETGQPFVKEAAMTKLLTSQVGRYSYS 942
            A+ + P+V+ M+   K D  +  GLFENGLM VE P E+GG+  SFMS  I +EEL+KVDP V +L D+ NTL  N+    G    Q+A+YLP   TDTV SFCL+EPG+GSDAF L TRA +SADGS+YT++GQKMWIS+AE AG++LVFA  DP+ GYKGITCFIV+++  G+E+G  E+KLGIRAS+TC V+F+  +VP EN++G++GKGY+ AI +LNEGRIGI AQM+GLA+G  D TM YLF+R QFGS IGDFQ MQHQYA++A EIEAAR L  +A RLK+ G PFVKEAAM KL   +VG  + S
Sbjct:   64 ADMIAPRVQEMERTSKFDHDITKGLFENGLMSVEIPSEYGGAEASFMSLAITVEELSKVDPTVGLLSDLQNTLVNNVFMFFGNE-EQKAKYLPRFCTDTVGSFCLTEPGAGSDAFGLKTRADVSADGSYYTLNGQKMWISHAEFAGVYLVFANADPSKGYKGITCFIVDRDTEGLEIGKPEDKLGIRASATCGVSFTDVKVPKENIIGELGKGYKIAISTLNEGRIGIAAQMLGLAQGVYDQTMPYLFDRHQFGSPIGDFQAMQHQYAEIALEIEAARLLTYNAARLKDAGLPFVKEAAMAKLHAGRVGERAAS 376          
BLAST of mRNA_P-wetherbeei_contig6106.1.2 vs. uniprot
Match: K3WZZ9_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WZZ9_GLOUD)

HSP 1 Score: 372 bits (956), Expect = 9.870e-125
Identity = 186/314 (59.24%), Postives = 239/314 (76.11%), Query Frame = 1
Query:    1 AEEVGPKVRTMDANCKMDSAVISGLFENGLMGVEAPVEHGGSGLSFMSACIVIEELAKVDPAVAVLVDIHNTLTINLMRQLGESFTQQARYLPCLSTDTVSSFCLSEPGSGSDAFALTTRAVLSADGSHYTIDGQKMWISNAEEAGIFLVFATVDPAAGYKGITCFIVEKEFGGVEVGPKEEKLGIRASSTCPVAFSGCRVPAENVLGQVGKGYRYAIESLNEGRIGIGAQMVGLARGCLDHTMRYLFERRQFGSFIGDFQGMQHQYAQVATEIEAARCLMVHAIRLKETGQPFVKEAAMTKLLTSQVGRYSYS 942
            A+ V P+V++MD   +MD  +  GLFENGL+ VE P E+GGS  SFMS CI IEEL+KVDP V +L D+ NT+  N+    G    Q+ +YLP LS++ + SFCLSE GSGSDAFAL TRA  S DGS+YT++GQKMWISNAE AG++LVFA VDP+ GYKGITCFIV+++  G+E+G  E+KLGIRASSTCPV  +  +VP EN++G+VGKGY+ AI +LNEGRIGI +QM+GLA+G  D T+ YLF+R QFG+ IG+FQ MQHQYA+ A EIE+AR L+ +A RLK+ G PFVK+AAM KL  S++   + S
Sbjct:   52 ADVVAPRVQSMDQAGEMDHEITKGLFENGLLSVEIPAEYGGSEASFMSLCITIEELSKVDPVVGLLCDLQNTVVNNVFLFHGNE-AQKEKYLPRLSSEMIGSFCLSEAGSGSDAFALKTRAEASVDGSYYTLNGQKMWISNAEYAGVYLVFANVDPSKGYKGITCFIVDRDMEGLEIGKPEDKLGIRASSTCPVLLNDVKVPKENIMGEVGKGYKIAISTLNEGRIGIASQMLGLAQGVYDQTIPYLFDRHQFGTAIGEFQAMQHQYAEAALEIESARLLVYNAARLKDAGLPFVKQAAMAKLHASRIAEKTAS 364          
BLAST of mRNA_P-wetherbeei_contig6106.1.2 vs. uniprot
Match: H3G8L6_PHYRM (Uncharacterized protein n=16 Tax=Peronosporaceae TaxID=4777 RepID=H3G8L6_PHYRM)

HSP 1 Score: 369 bits (947), Expect = 1.140e-123
Identity = 186/314 (59.24%), Postives = 234/314 (74.52%), Query Frame = 1
Query:    1 AEEVGPKVRTMDANCKMDSAVISGLFENGLMGVEAPVEHGGSGLSFMSACIVIEELAKVDPAVAVLVDIHNTLTINLMRQLGESFTQQARYLPCLSTDTVSSFCLSEPGSGSDAFALTTRAVLSADGSHYTIDGQKMWISNAEEAGIFLVFATVDPAAGYKGITCFIVEKEFGGVEVGPKEEKLGIRASSTCPVAFSGCRVPAENVLGQVGKGYRYAIESLNEGRIGIGAQMVGLARGCLDHTMRYLFERRQFGSFIGDFQGMQHQYAQVATEIEAARCLMVHAIRLKETGQPFVKEAAMTKLLTSQVGRYSYS 942
            A+ V P VR MD   +MD  +  GLF NGL+ VE P ++GGS  SFMS C+ IEEL+KVDP V +L D+ NT+  N+    G    Q+ +YLP LSTD + SFCLSE GSGSDAFAL T+A  SADGS+++I GQKMWISNAE +G++LVFA  DP+ GYKGITCFIV+++  G+E+G  EEKLGIRASSTC V  +  +VP EN+LG++GKGY+ AI +LNEGRIGI +QM+GLA+G  D T+ YLFER QFGS IG+FQ MQHQYA+ A +IE AR L+ +A RLK+ GQPFVK+AAM KL  S+V   + S
Sbjct:   31 ADVVAPNVRAMDEKGEMDHVITRGLFANGLLSVEIPADYGGSEASFMSLCLTIEELSKVDPVVGLLCDLQNTVVNNVFLVHGTE-QQKEKYLPRLSTDMIGSFCLSEAGSGSDAFALKTKAEASADGSYFSITGQKMWISNAEYSGVYLVFANADPSKGYKGITCFIVDRDMEGLEIGKPEEKLGIRASSTCSVTLTDVKVPKENILGELGKGYKIAISTLNEGRIGIASQMLGLAQGVYDQTLPYLFERHQFGSAIGEFQAMQHQYAEAALDIETARLLVYNAARLKDAGQPFVKQAAMAKLHASRVAEKTAS 343          
BLAST of mRNA_P-wetherbeei_contig6106.1.2 vs. uniprot
Match: A0A2G5B5T6_COERN (Acyl-CoA dehydrogenase NM domain-like protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B5T6_COERN)

HSP 1 Score: 370 bits (949), Expect = 1.210e-123
Identity = 198/313 (63.26%), Postives = 237/313 (75.72%), Query Frame = 1
Query:    4 EEVGPKVRTMDANCKMDSAVISGLFENGLMGVEAPVEHGGSGLSFMSACIVIEELAKVDPAVAVLVDIHNTLTINLMRQLGESFTQQARYLPCLSTDTVSSFCLSEPGSGSDAFALTTRAVLSADGSHYTIDGQKMWISNAEEAGIFLVFATVDPAAGYKGITCFIVEKEFGGVEVGPKEEKLGIRASSTCPVAFSGCRVPAENVLGQVGKGYRYAIESLNEGRIGIGAQMVGLARGCLDHTMRYLFERRQFGSFIGDFQGMQHQYAQVATEIEAARCLMVHAIRLKETGQPFVKEAAMTKLLTSQVGRYSYS 942
            E V PKV  MD    MD  VI GLF+ GLMGVE PV+ GG+  SF+SA +VIEELAKVDP+V+ + D+HNTL   + R  G S T +++YLP LS++ V SFCLSE  SGSDAFAL TRAV   DG +Y I+G KMWI+N+ EA IFLVFATVDP+ GYKGITCF+VEK+ G V +  KE+KLGIRASSTC ++F   RVPAENVLG+VGKGY+ AIE LNEGR+GI AQMVGLA+G  D  M YLFER+QFG+ IGDFQ MQHQYAQ+A EIEAAR L  +A R+KE G+ F+K AAM KL  SQV + + S
Sbjct:   58 EVVQPKVAEMDEKEIMDPQVIRGLFDAGLMGVETPVDFGGAEASFLSAILVIEELAKVDPSVSAMCDVHNTLVNTVFRSYG-SDTLKSKYLPQLSSEKVGSFCLSEAVSGSDAFALQTRAV--RDGDYYVINGSKMWITNSGEADIFLVFATVDPSKGYKGITCFVVEKDMG-VVIAKKEKKLGIRASSTCQLSFDDVRVPAENVLGEVGKGYKIAIEILNEGRVGIAAQMVGLAQGAFDSAMPYLFERKQFGTRIGDFQAMQHQYAQIAVEIEAARLLTYNAARMKEEGKSFIKNAAMAKLYASQVAQRASS 366          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6106.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JS11_9PHAE1.880e-15071.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZGF4_9STRA2.370e-14270.32Acyl-CoA dehydrogenase/oxidase (Fragment) n=1 Tax=... [more]
A0A0P1AWH5_PLAHL2.380e-12760.83Short branched chain specific acyl-mitochondrial n... [more]
A0A7S1S3N8_ALECA2.990e-12766.10Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A225UWA3_9STRA2.560e-12660.51Acyl-CoA dehydrogenase n=4 Tax=Phytophthora TaxID=... [more]
A0A8K1FNP6_PYTOL1.270e-12559.87Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A8K1FKI5_PYTOL2.560e-12559.87Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WZZ9_GLOUD9.870e-12559.24Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
H3G8L6_PHYRM1.140e-12359.24Uncharacterized protein n=16 Tax=Peronosporaceae T... [more]
A0A2G5B5T6_COERN1.210e-12363.26Acyl-CoA dehydrogenase NM domain-like protein n=1 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6106contigP-wetherbeei_contig6106:2..3215 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FWS9
Preferred nameACADSB
PFAMsAcyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
Model size985
Max annot lvl2759|Eukaryota
KEGG rclassRC00052,RC00068,RC00076,RC00148
KEGG koko:K09478,ko:K18402
KEGG ReactionR01175,R02661,R03172,R04751
KEGG Pathwayko00071,ko00280,ko01100,ko01110,ko01212,map00071,map00280,map01100,map01110,map01212
Hectar predicted targeting categoryother localisation
GOsGO:0002376,GO:0003674,GO:0003824,GO:0003995,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006091,GO:0006139,GO:0006163,GO:0006520,GO:0006629,GO:0006631,GO:0006635,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009063,GO:0009081,GO:0009083,GO:0009117,GO:0009150,GO:0009259,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016627,GO:0016937,GO:0019395,GO:0019637,GO:0019693,GO:0019752,GO:0022900,GO:0030258,GO:0031974,GO:0032787,GO:0033865,GO:0033875,GO:0034032,GO:0034440,GO:0034641,GO:0035383,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045087,GO:0046395,GO:0046483,GO:0050829,GO:0050896,GO:0051186,GO:0051704,GO:0051707,GO:0055086,GO:0055114,GO:0070013,GO:0071704,GO:0072329,GO:0072521,GO:0098542,GO:1901135,GO:1901360,GO:1901564,GO:1901565,GO:1901575
Exons7
Evalue5.3e-146
EggNOG OGsCOG1960@1|root,KOG0139@2759|Eukaryota
EC1.3.99.12
Descriptionoxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
Cds size936
COG categoryI
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6106.1.2prot_P-wetherbeei_contig6106.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6106 21..3185 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186888.9569106-UTR-P-wetherbeei_contig6106:1..201683186888.9569106-UTR-P-wetherbeei_contig6106:1..20Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6106 2..20 -
1683186889.056324-UTR-P-wetherbeei_contig6106:3185..32151683186889.056324-UTR-P-wetherbeei_contig6106:3185..3215Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6106 3186..3215 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186888.9745078-CDS-P-wetherbeei_contig6106:20..1791683186888.9745078-CDS-P-wetherbeei_contig6106:20..179Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6106 21..179 -
1683186888.9851458-CDS-P-wetherbeei_contig6106:583..8801683186888.9851458-CDS-P-wetherbeei_contig6106:583..880Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6106 584..880 -
1683186889.0005317-CDS-P-wetherbeei_contig6106:1175..14241683186889.0005317-CDS-P-wetherbeei_contig6106:1175..1424Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6106 1176..1424 -
1683186889.0104485-CDS-P-wetherbeei_contig6106:1602..16621683186889.0104485-CDS-P-wetherbeei_contig6106:1602..1662Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6106 1603..1662 -
1683186889.0201938-CDS-P-wetherbeei_contig6106:1870..18821683186889.0201938-CDS-P-wetherbeei_contig6106:1870..1882Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6106 1871..1882 -
1683186889.0313103-CDS-P-wetherbeei_contig6106:2095..22141683186889.0313103-CDS-P-wetherbeei_contig6106:2095..2214Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6106 2096..2214 -
1683186889.041284-CDS-P-wetherbeei_contig6106:3145..31851683186889.041284-CDS-P-wetherbeei_contig6106:3145..3185Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6106 3146..3185 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6106.1.2

>prot_P-wetherbeei_contig6106.1.2 ID=prot_P-wetherbeei_contig6106.1.2|Name=mRNA_P-wetherbeei_contig6106.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=312bp
MDANCKMDSAVISGLFENGLMGVEAPVEHGGSGLSFMSACIVIEELAKVD
PAVAVLVDIHNTLTINLMRQLGESFTQQARYLPCLSTDTVSSFCLSEPGS
GSDAFALTTRAVLSADGSHYTIDGQKMWISNAEEAGIFLVFATVDPAAGY
KGITCFIVEKEFGGVEVGPKEEKLGIRASSTCPVAFSGCRVPAENVLGQV
GKGYRYAIESLNEGRIGIGAQMVGLARGCLDHTMRYLFERRQFGSFIGDF
QGMQHQYAQVATEIEAARCLMVHAIRLKETGQPFVKEAAMTKLLTSQVGR
YSYSSPSDEGF*
back to top

mRNA from alignment at P-wetherbeei_contig6106:2..3215-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6106.1.2 ID=mRNA_P-wetherbeei_contig6106.1.2|Name=mRNA_P-wetherbeei_contig6106.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3214bp|location=Sequence derived from alignment at P-wetherbeei_contig6106:2..3215- (Phaeothamnion wetherbeei SAG_119_79)
GCCGAAGAAGTGGGGCCCAAAGTTCGCACCATGGACGCGAATTGCAAGAT GGACTCAGCGGTGATTTCAGGTAAGGGGTTCCTCTGTTTTCCATCACCGG CGACCTTCCCAGAAAGATGGCGCGAGCTTCTCTATACCGCCTCCCAGGTA ACCGCTGCTCTGTCGATTTTTCGTCTCGGTGTTGCCCCTCCTGCGGTTCT TTGCCGTGAGACCGCAGCTTCCTTTTGAACGTGCTCAATCTATGAAAAAT CCGTGCCATCTTCCGAATGTTGCGTTGTAGCCGTTTTCGAGTGCAGTAAT CGGATGAGTGTTAGGGCCGGACCGTAACCGAATCCTTGGCTGCGGTCGCG ATAAGAAGGCGTAAGATCCAGCGAGCCGCTAGTGCAATTGGGCAGCGTAA TGTATACCGGTTTTGTGTGTGTTCTTGACTGTAGTGTTCGTGAAACTCAG AAAAGCATGCAGCTCACTGCGAGGCGGAATCAAGCGGGAAGCATGGTAGC AGTTTTCTGAATTCCGCAACTTCGATTTGCTTTGCTCTTCCCAGGGTTTT CCCAATTCCGAATTGCTGAGACCAAGTATGCCCTGTGTATTTTGAGGCGA AAAGCAAGCGTTCTCTGTCTTGTCGCGGACGCGCTACTCCCTAGCCGGCC CCCCTGTCGCGAAAAGAGAGCGTCGTCCGGCAGCGGCCTCCAACGAACTC CTTGGAAAGCAGCAATGTTGAGGGTACCAGTTCAACGCCGCACACTGGAG CACGGCTTGTGCGTGGAATCCTCACGTCGTTTGGGTGCTCACGCCGTTCC AATTCTCATTGTTATTAACGAATATCGTTCTTTTTCCCGACGTCGATAAC CGCTACCCTTCTACTGACCTCCCCCTGGGGCTAGCCGAAACCAACTCTAA CGGGCAGAACTTTAAACGATTCTTCTGCATTTCATTGCCGCCCTGGACTG GCAAACCCGCTGCTTTCACCTTTTCTTTTTCTTTGCCTTGCATTTTGGAA GGTCTGTTTGAAAACGGGCTGATGGGCGTTGAAGCTCCGGTTGAACACGG CGGCAGCGGCTTGTCTTTCATGTCGGCGTGCATCGTCATCGAAGAGCTCG CCAAAGTTGACCCCGCCGTGGTAAGGTTCTCATAATGCTTCTTTTATGCA GGAAGGAATGCAGGGCGATCCACGTTTTGCTGAAAAAGACGGCTGGGAGT GCACGTTCTGCTTTAGCTGGAAATTGGAACATGCCTGAGGTCTCGTACAT TTCAGGTACTTAACATGCTTCCTGACCAGCCTTTCCTTTCTCCACATCGT CCTCTTTCAACGAAATTGGCCGTCTGACCACAGGCGGTTTTGGTGGTGAG TGCGTCCCGAAAACTCTCCGCGCTACCTTCAATCTTTCTATTTATCTTTT CAGCGAGACGGGCAACCGTTAAGTCACTTGGCGCATAAGAGAGTGCCTTT TTTAAGCGTCGCGTATGGTCTTTTTTCTCGCTGACTAATCACCAGCCCTC CCTAATTCGGCGTTCGTTTATCCGACGGTTTGCACTGAACCGCACCACAA CAGGATATCCACAACACGCTCACAATAAACCTGATGCGCCAGCTCGGTGA GTCTTTTACCCAAGTTTCGGGCGGTGAAAAGATACGGCTGCGTGCTAATC ATAAGTTGTCATGTTATAGAGCGCGATGAAGTGCAAACAACACGCTTTAT TCGCCATCCTTTCGCCATCCAACTTTTTGCTTCTATCTGTCCGCTCTCCT CATCGAAAACGATGCTTGATCTTCCAGGCACAGAGGCGCAGCAGGCCCGG TACCTGCCGTGCCTTAGCACCGACACCGTGTCGAGTTTTTGCCTCTCCGA GCCCGGCTCGGGCAGCGACGCGTTCGCTCTGACGACGCGGGCGGTGCTCT CGGCCGACGGCTCGCACTACACGATCGACGGCCAAAAGATGTGGATATCG AATGCCGAGGAGGCCGGCATCTTTCTGGTCTTCGCTACGGTGGATCCCGC CGCCGGATACAAGGGAATCACCTGCTTCATCGTCGAGAAGGTGAGTTTGG AGGCGACTACAGGCGGCGGCGAAGGAGGGCGGCGGCGGCGAGCGCCGATG GTTGTCAGTGAGACCGTTGCTGGTAGCAGCAGCGCACGGCGGCGGCAGAC GACTGCAAATGACGGCGGCTGCTGCAGATAGCTGCTGTGGCAGGCAACAG CGGCGGGCGGCGGCGGCAGGCGGCAGCGGTAGATGGTCGCGGCAATTGTT TTCTGTTTCCGAGTCTGATACACTCCCGCTGCTGCTGTCTGCACATCGTT CCCTCCCGCCAAAATCGAACCAACGAACAACCCAGGAGTTTGGAGGCGTG GAGGTAGGGCCGAAGGAGGAAAAGCTCGGCATCCGCGCCTCCTCCACCTG CCCCGTTGCCTTCAGCGGGTGCCGCGTGCCGGCTGAGAATGTGCTGGGCC AGGTCGGCAAGGGCTACCGCTACGCCATCGAGAGCCTCAACGAGGGCCGC ATCGGCATCGGTGCCCAGATGGTGGGGCTGGCGCGCGGCTGCCTCGACCA CACCATGAGGTACCTGTTCGAGCGGCGGCAGTTTGGGTCGTTCATCGGGG ACTTTCAGGGCATGCAGCACCAGTACGCGCAGGTGCGTTGGTGGGCGGAG AGTGAAAGGGGTGTGTGCTTGCTGGTCTTGCGGCGGGCTTGTTGGATGGA GGAGACAAGTTAAGCAGGGGTGAAGTTGAGTCGGCCTATTGGTTGGCAGT GTGGTTGGGTGCGGTCTTGTGAAGGCACCATTCCATCATGCTTTCGCTGT CGTACAGCATTAACTTTCCCACCAATTTCTGGAGCTTGTTGTGTGGGAAT TTTGCGGTATATGTCGGTCGTCATAGTTTCAGAAACGCTTGCGTTGTTCA TCCAGTTTTCATGGAAGGCTCTACTGCCCAGGCTACGGTAGCGGTGTCTT GTCTGGCAAGAGTTCACAAGGACTACGGACAGAGAGAGGGCCGTACCAGC CAACACCGACCGCCACAACCCATTGCTGAAATGCAGGTGGCGACGGAGAT TGAAGCGGCGCGCTGTCTGATGGTGCACGCCATCCGGCTGAAAGAGACGG GGCAGCCCTTCGTCAAGGAGGCCGCTATGACCAAACTCCTCACTTCGCAG GTCGGCCGGTACTCTTACTCTTCGCCTTCCGACGAAGGATTTTGATCACT GTGGGTGGTTTTTT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6106:2..3215-

>mRNA_P-wetherbeei_contig6106.1.2 ID=mRNA_P-wetherbeei_contig6106.1.2|Name=mRNA_P-wetherbeei_contig6106.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=936bp|location=Sequence derived from alignment at P-wetherbeei_contig6106:2..3215- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACGCGAATTGCAAGATGGACTCAGCGGTGATTTCAGGTCTGTTTGA
AAACGGGCTGATGGGCGTTGAAGCTCCGGTTGAACACGGCGGCAGCGGCT
TGTCTTTCATGTCGGCGTGCATCGTCATCGAAGAGCTCGCCAAAGTTGAC
CCCGCCGTGGCGGTTTTGGTGGATATCCACAACACGCTCACAATAAACCT
GATGCGCCAGCTCGGTGAGTCTTTTACCCAACAGGCCCGGTACCTGCCGT
GCCTTAGCACCGACACCGTGTCGAGTTTTTGCCTCTCCGAGCCCGGCTCG
GGCAGCGACGCGTTCGCTCTGACGACGCGGGCGGTGCTCTCGGCCGACGG
CTCGCACTACACGATCGACGGCCAAAAGATGTGGATATCGAATGCCGAGG
AGGCCGGCATCTTTCTGGTCTTCGCTACGGTGGATCCCGCCGCCGGATAC
AAGGGAATCACCTGCTTCATCGTCGAGAAGGAGTTTGGAGGCGTGGAGGT
AGGGCCGAAGGAGGAAAAGCTCGGCATCCGCGCCTCCTCCACCTGCCCCG
TTGCCTTCAGCGGGTGCCGCGTGCCGGCTGAGAATGTGCTGGGCCAGGTC
GGCAAGGGCTACCGCTACGCCATCGAGAGCCTCAACGAGGGCCGCATCGG
CATCGGTGCCCAGATGGTGGGGCTGGCGCGCGGCTGCCTCGACCACACCA
TGAGGTACCTGTTCGAGCGGCGGCAGTTTGGGTCGTTCATCGGGGACTTT
CAGGGCATGCAGCACCAGTACGCGCAGGTGGCGACGGAGATTGAAGCGGC
GCGCTGTCTGATGGTGCACGCCATCCGGCTGAAAGAGACGGGGCAGCCCT
TCGTCAAGGAGGCCGCTATGACCAAACTCCTCACTTCGCAGGTCGGCCGG
TACTCTTACTCTTCGCCTTCCGACGAAGGATTTTGA
back to top