mRNA_P-wetherbeei_contig6097.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6097.1.1
Unique NamemRNA_P-wetherbeei_contig6097.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6097.1.1 vs. uniprot
Match: D8LIF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF9_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 4.330e-51
Identity = 127/272 (46.69%), Postives = 158/272 (58.09%), Query Frame = 1
Query:  121 DPVTA-TREGVNEGANNSEAWPNVY-GTERRLNQRCPGRMVGPMGDGQFYCTSPTHGFCDRRSGDCFCSVGYTGSDCSLCLPSHFSSGGLCYPKKLCPGDCSGAGDXXXXXXXXXXXXXXXXXXXGTFLCAARFDARCSACTAGACVACGAGFSLS------SSLPTSNCDVXXXXXXXXXXXXXXXXXXXXXXADPLLLSTRRSGRRVDDAPLPADEETRQLTRPLPFGSQDPLFFADAEDFWLVGDSSSGPADSSGACAQGDDGDATWRC 912
            DP T   RE VNEGA  +  +P +Y G   R  Q CPG MVGP+ DG +YC    HG+CDRRSG CFC+VGY G+ C  C  +H+  GGLCYPK LCP DCS AG                     +  C++ F +RC+ CTA  C +C +G+ +         LP +  D          XXXXXXXXXXXXX DPLLLS RRSG R+DD  LP DE  R+L   L FG++DP +FA AE F +V ++SS   ++S ACAQG  GD +W C
Sbjct:   13 DPFTTFVRERVNEGAPGTPTYPRLYEGVYPR--QICPG-MVGPVDDGMYYCLGKEHGYCDRRSGTCFCNVGYQGTSCQECSSTHYEQGGLCYPKLLCPSDCSEAGTCHHSNGTCSCLPHRVGDDCSSLYCSSVFSSRCTECTADGCTSCESGYYVDYLGGGVDCLPCNRHD---------PXXXXXXXXXXXXXTDPLLLSIRRSGMRIDDPALPFDEMERELPHALEFGTKDPRYFASAEAFDVVANASSPLNETSVACAQGVFGDDSWAC 272          
BLAST of mRNA_P-wetherbeei_contig6097.1.1 vs. uniprot
Match: A0A5D6XZC4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZC4_9STRA)

HSP 1 Score: 179 bits (454), Expect = 6.220e-47
Identity = 159/304 (52.30%), Postives = 186/304 (61.18%), Query Frame = 1
Query:   28 ADGFRIAVEGD--SSANASHFIPYDGGFVARRYDPVTATREGVNEGANNSEAWPNVYGTERRLNQRCPGRMVGPMGDGQFYCTSPTHGFCDRRSGDCFCSVGYTGSDCSLCLPSHFSSGGLCYPKKLCPGDCSGAGDXXXXXXXXXXXXXXXXXXXGTFLCAARFDARCSACTAGACVACGAGFSLSSSLPT-SNCDVXXXXXXXXXXXXXXXXXXXXXXADPLLLSTRRSGRRVDDAPLPADEETRQLTRPLPFGSQDPLFFADAEDFWLVGDSSSGPA------DSSGACAQGDDGDATWRC 912
            A GFR+   G   +SA A+ F PY  G V    DP     E VNEGA  S   P VY  +R   Q CPG MVGP+ D +FYC     G+CDRRSG C C+ GYTG DC+ C PS+F  GGLCYPKK CP DCS  G XXXXXXXXXXXXXXXXXXX    C  +FDA C++CT+  C++C  G+ +  +  T ++C        XXXXXXXXXXXXXXXXADPLL S RRSG R  DA LP DE TR+     P+GSQDP  F +AE F L     +G A      D S +C QG + DAT  C
Sbjct:   15 ASGFRVLGAGTDPASAPAAVFEPYAHGSVGTFGDPTNPEPERVNEGAPFSPDVPRVY-FQRPPMQSCPG-MVGPVNDEEFYCRGREFGYCDRRSGLCVCNQGYTGLDCTACKPSYFKRGGLCYPKKSCPKDCSQGGAXXXXXXXXXXXXXXXXXXXSQAFC--QFDALCTSCTSTTCLSCVEGYYVEPATQTCASCK------KXXXXXXXXXXXXXXXXADPLLNSVRRSGARAVDAALPFDELTREFAFAFPYGSQDPRVFDEAEAFDLTPTPVAGLAPTPLLSDVSRSCTQGLNSDATLSC 308          
BLAST of mRNA_P-wetherbeei_contig6097.1.1 vs. uniprot
Match: A0A6A3MYL0_9STRA (PA14 domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MYL0_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.010e-44
Identity = 138/279 (49.46%), Postives = 165/279 (59.14%), Query Frame = 1
Query:   82 FIPYDGGFVARRYDPVTATREGVNEGANNSEAWPNVYGTERRLNQRCPGRMVGPMGDGQFYCTSPTHGFCDRRSGDCFCSVGYTGSDCSLCLPSHFSSGGLCYPKKLCPGDCSGAGDXXXXXXXXXXXXXXXXXXXGTFLCAARFDARCSACTAGACVACGAGFSLSSSLPTSNCDVXXXXXXXXXXXXXXXXXXXXXXADPLLLSTRRSGRRVDDAPLPADEETRQLTRPLPFGSQDPLFFADAEDFWLVGDSS--SGPADSSGACAQGDDGDATWRC 912
            F PY  G+V    DP   + E +NEGA  S   P ++     L Q CPG MVGP  +G +YC S  +G+CDRRSG C C+ GYTG DC+ CLP +F  GGLC  KK CP DCS  G+XXXXXXXXXXX            CA  FD +C +CT+  C+ C  GFS+    PT+   V     XXXXXXXXXXXXXXX  AD  L S RRSG R  D PLP DE  R+ ++   +GSQDP  F +AE F +V  S   S   +SS AC QG +GDA W C
Sbjct:   38 FEPYAAGYVGYYGDPANPSAERLNEGAPYSPDTPRIF-FSAPLQQTCPG-MVGPGRNGDYYCYSREYGYCDRRSGLCVCNQGYTGLDCTACLPGYFKQGGLCSAKKSCPNDCSRGGEXXXXXXXXXXXPTRRGADGSQRFCA--FDEKCVSCTSSVCLRCVEGFSVD---PTTQTCVSCARYXXXXXXXXXXXXXXX--ADLQLNSVRRSGARRIDQPLPDDERVREFSQTFVYGSQDPRVFDEAESFTIVPASYTLSPLNESSFACTQGGNGDAGWSC 307          
BLAST of mRNA_P-wetherbeei_contig6097.1.1 vs. uniprot
Match: G4YY21_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YY21_PHYSP)

HSP 1 Score: 167 bits (424), Expect = 5.830e-43
Identity = 141/279 (50.54%), Postives = 172/279 (61.65%), Query Frame = 1
Query:   82 FIPYDGGFVARRYDPVTATREGVNEGANNSEAWPNVYGTERRLNQRCPGRMVGPMGDGQFYCTSPTHGFCDRRSGDCFCSVGYTGSDCSLCLPSHFSSGGLCYPKKLCPGDCSGAGDXXXXXXXXXXXXXXXXXXXGTFLCAARFDARCSACTAGACVACGAGFSLSSSLPTSNCDVXXXXXXXXXXXXXXXXXXXXXXADPLLLSTRRSGRRVDDAPLPADEETRQLTRPLPFGSQDPLFFADAEDFWLVGDSS--SGPADSSGACAQGDDGDATWRC 912
            F PY  G+V    DP   + E +NEG+  S   P ++     L Q CPG MVGP  +G +YC S  +G+CDRRSG C C+ GYTG DC+ CLP +F  GGLC+ K  CP DCS  G+XXXXXXXXXXXXXXXXXXX    CA  FD +C +C++  C+ C  GFS+    P +   V       XXXXXXXXXXXXXXXAD  L S RRSG R  D PLP DE+ R+ ++   +GSQDP  F +AE F +V  S   S   +SS AC QG + DA W C
Sbjct:   35 FEPYAAGYVGYYGDPSNPSAERLNEGSPYSPDTPRIF-FSAPLQQACPG-MVGPGRNGDYYCFSREYGYCDRRSGLCVCNQGYTGLDCTACLPGYFKQGGLCFAKSDCPNDCSRGGEXXXXXXXXXXXXXXXXXXXSQRFCA--FDEKCVSCSSTTCLRCVEGFSVD---PATQTCVVVSCARYXXXXXXXXXXXXXXXADLQLNSVRRSGARSIDQPLPDDEQVREFSQTFVYGSQDPRVFDEAEPFTVVPASYTLSPLNESSLACTQGGNADAGWSC 306          
BLAST of mRNA_P-wetherbeei_contig6097.1.1 vs. uniprot
Match: A0A225WFM4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WFM4_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.080e-42
Identity = 141/305 (46.23%), Postives = 172/305 (56.39%), Query Frame = 1
Query:   13 LLLGGADGFR--IAVEGDSSANASHFIPYDGGFVARRYDPVTATREGVNEGANNSEAWPNVYGTERRLNQRCPGRMVGPMGDGQFYCTSPTHGFCDRRSGDCFCSVGYTGSDCSLCLPSHFSSGGLCYPKKLCPGDCSGAGDXXXXXXXXXXXXXXXXXXXGTFLCAARFDARCSACTAGACVACGAGFSLSSSLPTSNCDVXXXXXXXXXXXXXXXXXXXXXXADPLLLST-RRSGRRVDDAPLPADEETRQLTRPLPFGSQDPLFFADAEDFWLVGDS-SSGPA-DSSGACAQGDDGDATWRC 912
            LLL  A  FR   + E    A  + F PY  GFV    DP   + E VNEG+  S   P ++     L + CPG MVGP  +G++YC S  +G+CDRRSG C C+ GYTG DC+ C+PS+F  GGLC+PKK CP DCS  G+     XXXXXX            CA  FD +C +CT+  C+ C   F +  S  T  C         XXXXXXXXXXXXXXXAD LL S  RRSG R  D PLP DE  R+L++   +GSQDP  F +AE F L   S SS P  +SS +C QG + D  W C
Sbjct:   10 LLLPSAAAFREVASPEDPLLATPAVFTPYVTGFVGYYGDPTNPSEERVNEGSPFSPDTPRIF-FSAPLQRSCPG-MVGPGRNGEYYCNSREYGYCDRRSGLCVCNHGYTGLDCTTCVPSYFKRGGLCFPKKNCPNDCSRGGECNYATXXXXXXPMRRGADCSQRFCA--FDDKCVSCTSTKCLRCVEKFYVDPS--TQTC---VSCTRYXXXXXXXXXXXXXXXADLLLNSVLRRSGARKLDQPLPDDEIKRELSQTFVYGSQDPRVFDEAEAFTLAPTSYSSLPLNESSVSCTQGANADTKWNC 305          
BLAST of mRNA_P-wetherbeei_contig6097.1.1 vs. uniprot
Match: A0A485KNT5_9STRA (Aste57867_9647 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNT5_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.680e-41
Identity = 154/308 (50.00%), Postives = 188/308 (61.04%), Query Frame = 1
Query:    7 AALLLGGADGFRIAVEGDSS----ANASHFIPYDGGFVARRYDPVTAT-REGVNEGANNSEAWPNVYGTERRLNQRCPGRMVGPMGDGQFYCTSPTHGFCDRRSGDCFCSVGYTGSDCSLCLPSHFSSGGLCYPKKLCPGDCSGAGDXXXXXXXXXXXXXXXXXXXGTFLCAARFDARCSACTAGACVACGAGFSLSSSLPTSNCDVXXXXXXXXXXXXXXXXXXXXXXADPLLLSTRRSG-RRVDDAPLPADEETRQLTRPLPFGSQDPLFFADAEDFWLVGDSSSGPADSSGACAQGDDGDATWRC 912
            AA+LL     FR+    D S      A+ F PY  GFV    DP T   RE +N GA  +   P  +  +  + Q+CPG MVGP  DG++YC    +GFCD+RS  C+C+ GY G +C+ C+P +F  GGLCYPKK CP DCSG G XXXXXXXXXXXXXXXXXXX    C  RFD  C++C++ AC+AC  GF      PT N +  XXXXXXXXXXXXXXXXXXXXX D LL S RRSG R   D P+PA+E  R+ +    +GSQ+P  F +AE + LV     G A     C QG   DA+W C
Sbjct:    9 AAVLLTAVHAFRVVNVTDVSQLAQVPAAVFPPYAHGFVGYYGDPSTTFFREHINSGAIFNPELPTQW-NDMDIYQKCPG-MVGPFSDGEYYCVGKEYGFCDQRSSTCWCNKGYQGLNCTQCIPEYFMQGGLCYPKKNCPRDCSGQGSXXXXXXXXXXXXXXXXXXXSQQSCL-RFDPLCTSCSSNACLACAPGF-----FPT-NTNSCXXXXXXXXXXXXXXXXXXXXXXDFLLNSIRRSGARNTIDPPVPAEEVNREFSFTFVYGSQEPKVFDEAEPYALVASMPPGRA-----CTQGTSLDASWLC 302          
BLAST of mRNA_P-wetherbeei_contig6097.1.1 vs. uniprot
Match: A0A7S3HQ69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQ69_9STRA)

HSP 1 Score: 147 bits (370), Expect = 4.160e-39
Identity = 93/237 (39.24%), Postives = 113/237 (47.68%), Query Frame = 1
Query:   37 FRIAVEGDSSANASHFIPYDGGFVARRYDPVTATREGVNEGANNSEAWPNVY-GTERRLNQRCPGRMVGPMGDGQFYCTSPTHGFCDRRSGDCFCSVGYTGSDCSLCLPSHFSSGGLCYPKKLCPGDCSGAGDXXXXXXXXXXXXXXXXXXXGTFLCAARFDARCSACTAGACVACGAGFSLS--SSLPTSNCDVXXXXXXXXXXXXXXXXXXXXXXADPLLLSTRRSGRRVDDAPL 738
            FRI   G ++ N S+F PYD GFV    DP    RE +NEGA  +     +Y G   R  Q CP  MVGP  DG +YC++   G+CDRRSG CFC+ GY G DCS C  SHF  G  C+PKKLCP DCSG+G+                    T LC  +    C  CT   C+ C +G+ L+  SS   S C                        AD  L S RRSG R+ D  L
Sbjct:   20 FRILAPGTTTPNGSYFKPYDKGFVGTYGDPRNFQRERINEGAFETTEQELLYEGVSPR--QSCP-NMVGPFSDGNYYCSAREFGYCDRRSGTCFCNAGYFGIDCSQCSDSHFKIGTHCFPKKLCPNDCSGSGECDFASGLCTCLPHRTGSMCETQLCT-KHSPLCDTCTENECLKCASGYYLTGNSSKACSTC-----YDFDPRCAGCTLEEGCTVCADSTLTSVRRSGYRLSDPAL 247          
BLAST of mRNA_P-wetherbeei_contig6097.1.1 vs. uniprot
Match: A0A1V9ZK47_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZK47_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.920e-38
Identity = 131/312 (41.99%), Postives = 172/312 (55.13%), Query Frame = 1
Query:    7 AALLLG----GADGFRIAVEGDSSANASH----FIPYDGGFVARRYDPVT-ATREGVNEGANNSEAWPNVYGTERRLNQRCPGRMVGPMGDGQFYCTSPTHGFCDRRSGDCFCSVGYTGSDCSLCLPSHFSSGGLCYPKKLCPGDCSGAGDXXXXXXXXXXXXXXXXXXXGTFLCAARFDARCSACTAGACVACGAGFSLSSSLPTSNCDVXXXXXXXXXXXXXXXXXXXXXXADPLLLSTRRSGRRVDDA-PLPADEETRQLTRPLPFGSQDPLFFADAEDFWLVGDSSSGPADSSGACAQGDDGDATWRC 912
            A +LLG    G + FR+    D SA  S     F PY  G V    DP T A RE +N G   +   P  + T   ++ +CPG MVGP  DG++YC    +GFCDRRS  C+C+ GYTG  C+ C+P ++  GGLCYP+K CP DCSG G XXXXXXXXXXXXXX         CAA  DA C++C  G+C +C  G+ +++S   + C +  XXXXXX              AD  L S +RSG R  D  PLP +E  R+ +    +G+Q P  F + E +++V      P  ++ AC QG  GDATW C
Sbjct:    3 AGVLLGAWAAGVNSFRLLNATDVSALVSLPPAVFGPYARGNVGYYGDPTTTAFREHINPGVIFNPEQPTQW-TGVTISLQCPG-MVGPFSDGEYYCVGKAYGFCDRRSSTCWCNKGYTGVACTECIPEYYPLGGLCYPRKNCPNDCSGQGSXXXXXXXXXXXXXXVGADCSLQSCAA-IDALCTSCAGGSCRSCIPGYFVNASNRCAPCTLIDXXXXXXDIGVCLVC------ADFQLNSVKRSGPRSTDLWPLPPEEVGREFSFQAVYGTQSPHVFDETEAYFVVPT----PLGATTACTQGTRGDATWTC 301          
BLAST of mRNA_P-wetherbeei_contig6097.1.1 vs. uniprot
Match: T0R1I8_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R1I8_SAPDV)

HSP 1 Score: 151 bits (381), Expect = 3.030e-37
Identity = 118/279 (42.29%), Postives = 155/279 (55.56%), Query Frame = 1
Query:   82 FIPYDGGFVARRYDPVTAT-REGVNEGANNSEAWPNVYGTERRLNQRCPGRMVGPMGDGQFYCTSPTHGFCDRRSGDCFCSVGYTGSDCSLCLPSHFSSGGLCYPKKLCPGDCSGAGDXXXXXXXXXXXXXXXXXXXGTFLCAARFDARCSACTAGACVACGAGFSLSSSLPTSNCDVXXXXXXXXXXXXXXXXXXXXXXADPLLLSTRRSGRRVDDA-PLPADEETRQLTRPLPFGSQDPLFFADAEDFWLVGDSSSGPADSSGACAQGDDGDATWRC 912
            F PY  G V    +P T + RE +N GA      P  +G    ++ +CPG MVGP  DG++YC    +G+CDRRS  C+C+ GYTG +C+ C+P +F  GGLCYPK+ CP DCSG G                    G   C A  DA C +C    C+ C   + +S+S  T+ C     XXXXXXXXXXXXXXXXXXXAD  L S +RSG R  D  P+P +E  R+ +    FGSQ P  F + E + L   +     D++ AC QG +GDA+W+C
Sbjct:   41 FGPYARGNVGYYGNPATTSFREHINPGAIFHPEQPTQWGGVA-ISLQCPG-MVGPFSDGEYYCAGREYGYCDRRSSTCYCNKGYTGRNCTTCIPEYFGVGGLCYPKRSCPNDCSGQGTCDYATGICSCSPSRVGLDCGQPACTA-IDALCVSCAGATCLRCIQSYFVSAS--TNRC---VSXXXXXXXXXXXXXXXXXXXADFHLNSVKRSGPRTTDPWPMPPEERIREFSYLAVFGSQSPHAFDETEPYTLQATA----LDATQACTQGGNGDASWQC 307          
BLAST of mRNA_P-wetherbeei_contig6097.1.1 vs. uniprot
Match: A0A024TPT6_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TPT6_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.900e-36
Identity = 127/282 (45.04%), Postives = 160/282 (56.74%), Query Frame = 1
Query:   82 FIPYDGGFVARRYDPV-TATREGVNEGANNSEAWPNVYGTERRLNQRCPGRMVGPMGDGQFYCTSPTHGFCDRRSGDCFCSVGYTGSDCSLCLPSHFSSGGLCYPKKLCPGDCSGAGDXXXXXXXXXXXXXXXXXXXGTFLCAARFDARCSACTAGACVACGAGFS--LSSSLPTSNCDVXXXXXXXXXXXXXXXXXXXXXXADPLLLSTRRSGRR--VDDAPLPADEETRQLTRPLPFGSQDPLFFADAEDFWLVGDSSSGPADSSGACAQGDDGDATWRC 912
            F PY  GFV    DP  T  R+ +N GA  +   P V  +   + QRCPG MVGP  DG++YC    +GFCD+RS  C+C+ GY G +C+ C+P ++  GGLCYPKK CP DCSG G XXXXXXXXXXXXXXXXXXX    C  RFD  C++CTAGAC+AC  G+    +  LP S  D                  XXXX  D +L S RRSG R  +D +  P +E TR+ +    +GSQ P  F +AE F +V          S +C QG   DA++ C
Sbjct:   39 FPPYANGFVGYYGDPSSTFFRDHINSGAIFNPEIP-VQWSGVDILQRCPG-MVGPFSDGEYYCVGKEYGFCDQRSSTCWCNKGYEGLNCTQCIPEYYKHGGLCYPKKNCPSDCSGQGTXXXXXXXXXXXXXXXXXXXSQQSCH-RFDMLCTSCTAGACLACLPGYFPITNRCLPCSTYD---------PRCITCDDQXXXXCGDFILNSVRRSGARAGIDPSTSPLEEPTREFSFLSVYGSQHPQVFDEAEPFGIVR-----AIPPSLSCTQGTSMDASFAC 303          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6097.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LIF9_ECTSI4.330e-5146.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5D6XZC4_9STRA6.220e-4752.30Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6A3MYL0_9STRA1.010e-4449.46PA14 domain-containing protein n=13 Tax=Phytophtho... [more]
G4YY21_PHYSP5.830e-4350.54Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A225WFM4_9STRA1.080e-4246.23Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A485KNT5_9STRA1.680e-4150.00Aste57867_9647 protein n=1 Tax=Aphanomyces stellat... [more]
A0A7S3HQ69_9STRA4.160e-3939.24Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A1V9ZK47_9STRA1.920e-3841.99Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
T0R1I8_SAPDV3.030e-3742.29Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A024TPT6_9STRA1.900e-3645.04Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6097contigP-wetherbeei_contig6097:1861..3567 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LIF9
PFAMsActin,CH,Calx-beta,Filamin,Ist1,PA14
Model size912
Max annot lvl2759|Eukaryota
KEGG koko:K04437,ko:K06572
KEGG Pathwayko04010,ko04360,ko04510,ko05132,ko05205,map04010,map04360,map04510,map05132,map05205
Hectar predicted targeting categoryother localisation
Exons5
Evalue7.1e-52
EggNOG OGsCOG5069@1|root,KOG0518@2759|Eukaryota
Descriptionregulation of membrane repolarization during atrial cardiac muscle cell action potential
Cds size912
COG categoryZ
BRITEko00000,ko00001,ko04090,ko04147,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186888.3214786-CDS-P-wetherbeei_contig6097:1860..20741683186888.3214786-CDS-P-wetherbeei_contig6097:1860..2074Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6097 1861..2074 +
1683186888.332824-CDS-P-wetherbeei_contig6097:2368..25531683186888.332824-CDS-P-wetherbeei_contig6097:2368..2553Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6097 2369..2553 +
1683186888.343394-CDS-P-wetherbeei_contig6097:2853..30591683186888.343394-CDS-P-wetherbeei_contig6097:2853..3059Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6097 2854..3059 +
1683186888.351308-CDS-P-wetherbeei_contig6097:3179..34451683186888.351308-CDS-P-wetherbeei_contig6097:3179..3445Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6097 3180..3445 +
1683186888.3593328-CDS-P-wetherbeei_contig6097:3526..35671683186888.3593328-CDS-P-wetherbeei_contig6097:3526..3567Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6097 3527..3567 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6097.1.1prot_P-wetherbeei_contig6097.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6097 1861..3567 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6097.1.1

>prot_P-wetherbeei_contig6097.1.1 ID=prot_P-wetherbeei_contig6097.1.1|Name=mRNA_P-wetherbeei_contig6097.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=304bp
AAAALLLGGADGFRIAVEGDSSANASHFIPYDGGFVARRYDPVTATREGV
NEGANNSEAWPNVYGTERRLNQRCPGRMVGPMGDGQFYCTSPTHGFCDRR
SGDCFCSVGYTGSDCSLCLPSHFSSGGLCYPKKLCPGDCSGAGDCDVKTG
VCRCSEHRTGDDCGTFLCAARFDARCSACTAGACVACGAGFSLSSSLPTS
NCDVCLPCARFDPRCAVCDADRCLRCADPLLLSTRRSGRRVDDAPLPADE
ETRQLTRPLPFGSQDPLFFADAEDFWLVGDSSSGPADSSGACAQGDDGDA
TWRC
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mRNA from alignment at P-wetherbeei_contig6097:1861..3567+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6097.1.1 ID=mRNA_P-wetherbeei_contig6097.1.1|Name=mRNA_P-wetherbeei_contig6097.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1707bp|location=Sequence derived from alignment at P-wetherbeei_contig6097:1861..3567+ (Phaeothamnion wetherbeei SAG_119_79)
GCTGCCGCTGCCCTGCTACTCGGCGGAGCCGACGGCTTCCGCATCGCCGT GGAGGGCGACTCCTCCGCTAACGCGTCACATTTCATACCGTACGACGGCG GCTTCGTCGCTCGGCGTTACGACCCCGTGACGGCGACGCGCGAGGGCGTC AATGAAGGGGCAAACAACTCAGAGGCTTGGCCCAATGTCTACGGGACGGA GCGCCGCCTCAATCGTAAGCTTGAAACAGAAACGTTCGCTTTCTTACCCA CTGAGCACCCTTCGTCTGTCCTAGCTGGGGCGATCTGGTTGCATGGAGAA AGGGTGTTGAAGTTTGCCCAGGTTTGGTTTTCTTGCGGATCTAAAACGCG CTGACGCATCTCTGGCCCTCTTCCCCAAGGCATTACGAAGTGGGACGTTA CTCACGAAACGTTTTCACCCGTTTTCTGCCTTTCCCTTTCCCTTCCGTCT CTTCATTTGCACCTTTCCTCGAAACCGCGATATGTTCTCTCAACGCAACA AAACGCAGAGAGATGCCCCGGTCGAATGGTGGGACCGATGGGCGACGGGC AGTTCTACTGCACATCACCGACCCACGGCTTCTGCGATCGCCGCTCCGGC GACTGCTTCTGCAGCGTCGGCTACACCGGGTCGGACTGCTCGCTGTGCCT GCCCTCCCACTTTTCTTCGGGGGGCCTCTGCTACCCCAAGAAGGTAAGTC GTGAAAATTAAGTGACGTGCTGTGGCGGTTACGGATAAGAGACATTTTCG ATTCTTCCTGTTCGAAGAAGGATGGTGGGAAGGCTGATCCCGTACAGAAG GCGTGCAGGCGGGTGGCTGTTTAGTCCTTTTCGTTGCGCGTTCTTGGGAT GCATTTTTCTCTCACCCTTCTTCGCCGCTGGCTCCCTGCCACTGGCTCTT GTATGATTTCATCCTTCACCTTCTGACCTTACTCTCTCCCAGCCCCCCAA TGCATCCTCCACACAATTCTCCCCTCAAAACTTTCAAAAATAGCTCTGCC CCGGCGACTGCAGCGGCGCCGGCGACTGCGACGTCAAGACAGGGGTCTGC CGCTGCTCTGAGCACCGCACCGGCGATGATTGTGGCACCTTCCTCTGCGC TGCGCGCTTCGACGCCCGCTGCTCCGCCTGCACCGCCGGCGCCTGCGTCG CCTGCGGCGCCGGCTTTTCCCTCTCTTCTTCTCTTCCAACATCAAATTGG TCGGCCGCTACTGGCACCAACGTCACCAGCGCCAATAATGCTGCCGGCAA CGCCGCATTAAACGCAATGTCCGCCAGCAACGGCACTTCGTCTGACGACG GCGGTGGCGGCGGTGTCAGCGACGTCTGCCTGCCGTGCGCGCGGTTCGAC CCGCGGTGCGCTGTTTGCGACGCCGACCGCTGCCTGCGATGCGCCGACCC GCTGCTGCTGTCAACGCGGCGCTCCGGGCGGCGCGTCGACGACGCACCGC TGCCGGCGGACGAAGAGACACGGCAGTTGACGCGACCGCTGCCGTTCGGT AGTCAGGACCCGCTCTTCTTCGCCGACGCCGAGGACTTTTGGCTGGTCGG TGACAGTTCAAGTGGTCCTGCCGACAGTTCCGGCGGTTTTGTTGGGGGTG ATGGAAGCAGCAATAGCAGCAGTAGCCACAACGGAACGTTTGTGCCGCCG AATGAAAGGGCGGTAGCGTGTGCGCAGGGCGATGATGGCGACGCAACATG GCGATGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6097:1861..3567+

>mRNA_P-wetherbeei_contig6097.1.1 ID=mRNA_P-wetherbeei_contig6097.1.1|Name=mRNA_P-wetherbeei_contig6097.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=912bp|location=Sequence derived from alignment at P-wetherbeei_contig6097:1861..3567+ (Phaeothamnion wetherbeei SAG_119_79)
GCTGCCGCTGCCCTGCTACTCGGCGGAGCCGACGGCTTCCGCATCGCCGT
GGAGGGCGACTCCTCCGCTAACGCGTCACATTTCATACCGTACGACGGCG
GCTTCGTCGCTCGGCGTTACGACCCCGTGACGGCGACGCGCGAGGGCGTC
AATGAAGGGGCAAACAACTCAGAGGCTTGGCCCAATGTCTACGGGACGGA
GCGCCGCCTCAATCAGAGATGCCCCGGTCGAATGGTGGGACCGATGGGCG
ACGGGCAGTTCTACTGCACATCACCGACCCACGGCTTCTGCGATCGCCGC
TCCGGCGACTGCTTCTGCAGCGTCGGCTACACCGGGTCGGACTGCTCGCT
GTGCCTGCCCTCCCACTTTTCTTCGGGGGGCCTCTGCTACCCCAAGAAGC
TCTGCCCCGGCGACTGCAGCGGCGCCGGCGACTGCGACGTCAAGACAGGG
GTCTGCCGCTGCTCTGAGCACCGCACCGGCGATGATTGTGGCACCTTCCT
CTGCGCTGCGCGCTTCGACGCCCGCTGCTCCGCCTGCACCGCCGGCGCCT
GCGTCGCCTGCGGCGCCGGCTTTTCCCTCTCTTCTTCTCTTCCAACATCA
AATTGCGACGTCTGCCTGCCGTGCGCGCGGTTCGACCCGCGGTGCGCTGT
TTGCGACGCCGACCGCTGCCTGCGATGCGCCGACCCGCTGCTGCTGTCAA
CGCGGCGCTCCGGGCGGCGCGTCGACGACGCACCGCTGCCGGCGGACGAA
GAGACACGGCAGTTGACGCGACCGCTGCCGTTCGGTAGTCAGGACCCGCT
CTTCTTCGCCGACGCCGAGGACTTTTGGCTGGTCGGTGACAGTTCAAGTG
GTCCTGCCGACAGTTCCGGCGCGTGTGCGCAGGGCGATGATGGCGACGCA
ACATGGCGATGC
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