mRNA_P-wetherbeei_contig609.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig609.1.1 vs. uniprot
Match: A0A836CD69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD69_9STRA) HSP 1 Score: 242 bits (618), Expect = 2.410e-73 Identity = 136/265 (51.32%), Postives = 163/265 (61.51%), Query Frame = 1
Query: 1 ALSVLRQSYVDMGIDLGDDLADLRGVRVDVE-EVEAGGPSGFRIRKVASTAAAEADEASTSTATLGEAYWPPAPQSVATPAVERLRGWVERIVVGLHMCPFTHSADLAGTGLEKKGVPPGPVGYPVSLAVSASGLLRDFWVETIGLLQTHPAQLSTLLLSAPVVAPDDFKRWTSMTEALTRSLRLFRVDDVIKCITFHPNYQRSAVEPRDGPAHMHLPPTSWMPKMMPSMLKNFGGGANGGDKDFDYAVSDFQRRTPHPVINVLR 792
A+ +L SY D+G LGD L DL+ V V + A GF IR GE Y +P + A VE+LR WVER+VVGL +CPFTHS D+A GLEK+GV PG +GYPV+ + +G+LRDFW ET+ +L T P Q STLLLSAP A D F W + TEA+ SLRLFRVDD+IK I FHP+Y RS V+P + PAH HLPPTSWMPKMM + K G +DF Y SDFQRR P P INVLR
Sbjct: 97 AMELLVNSYRDLGDKLGDRLPDLKAVEVSFDFPPGATRLKGFHIRSA------------------GEPYKLGSPAAAAA-GVEQLRAWVERVVVGLRVCPFTHSVDIAPAGLEKRGVTPGFIGYPVTRSTCTAGVLRDFWAETLTMLSTPPEQTSTLLLSAPCFARD-FNTWAAFTEAMIASLRLFRVDDMIKVIVFHPDYVRSHVQPTESPAHGHLPPTSWMPKMMENFYK-------GLQEDFPYGASDFQRRAPCPAINVLR 334
BLAST of mRNA_P-wetherbeei_contig609.1.1 vs. uniprot
Match: L1IR53_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IR53_GUITC) HSP 1 Score: 143 bits (361), Expect = 1.610e-36 Identity = 74/188 (39.36%), Postives = 109/188 (57.98%), Query Frame = 1
Query: 238 AVERLRGWVERIVVGLHMCPFTHSADLAGTGLEKKGVPPGPVGYPVSLAVSASGLLRDFWVETIGLLQTHPAQLSTLLLSAPVVAPDDFKRWTSMTEALTRSLRLFRVDDVIKCITFHPNYQRSAVEPRDGPAHMHLPPTSWMPKMMPSMLKNFGGGANGGDKDFDYAVSDFQRRTPHPVINVLRGAQ 801
AV R + WVER+++G+ +CPFT S +A TGL K G+ PGP+GYPV A +L W +L P +LST+LL P + DDF R+ + + ++ +L + + I + FHP Y+R AV P + P H HLPP + M+ SML NF + + + + +DF RR+P P+IN+LR Q
Sbjct: 57 AVLRCQRWVERVIIGMRVCPFTQSVSVAATGLSKVGIAPGPIGYPVCHADHVVHVLSALWNTISDMLSKDPTELSTVLLLTPCFSQDDFPRYAAASRVISNALLSLKAEKNISLVFFHPFYEREAVFPVNDPTHGHLPPEN----MLRSMLLNFYEIEDVMNFEDNLHQNDFSRRSPMPMINLLRTEQ 240
BLAST of mRNA_P-wetherbeei_contig609.1.1 vs. uniprot
Match: A0A7S1BTM4_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BTM4_9STRA) HSP 1 Score: 146 bits (368), Expect = 3.840e-36 Identity = 78/193 (40.41%), Postives = 105/193 (54.40%), Query Frame = 1
Query: 250 LRGWVERIVVGLHMCPFTHSADLAGTGLEKKGVPPGPVGYPVSLAVSASGLLRDFWVETIGLLQTHPAQLSTLLLSAPVVAPDDFKRWTSMTEALTRSLRLFRVDDVIKCITFHPNYQRSAVEPRDGPAHMHLPPTSWMPKMMPSMLKNFGGGANGGDK--DFDYAVSDFQRRTPHPVINVLRGAQRTSLNGG 822
LR +V R+VVG CP+ S DLA GLE KGV PGPV Y S A + FW I LL P ++ST LLS P V D R+ ++ E ++R L L+R D + + FHP Y R ++ P D P + HLPP W+ MM G + D D + A+S++QRR PH +IN+LR + + GG
Sbjct: 209 LRSFVSRVVVGAEACPYARSPDLAAVGLEAKGVSPGPVAYRFSPTSDACVAVAAFWQSCIELLSAPPEEISTTLLSLPNVDGGDHARFAAVVEVISRYLCLYRGDGIFGLVHFHPEYDRGSIYPLDKPLYGHLPPMGWLRPMMRKC-----GSSKAADTLTDEELALSNYQRRAPHTMINILRVSHLDAATGG 396
BLAST of mRNA_P-wetherbeei_contig609.1.1 vs. uniprot
Match: A0A7S1Z2S2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z2S2_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.190e-33 Identity = 80/197 (40.61%), Postives = 110/197 (55.84%), Query Frame = 1
Query: 250 LRGWVERIVVGLHMCPFTHSADLAGTGLEKKGVPPGPVGYPVSLAVSASGLLRDFWVETIGLLQTHPAQLSTLLLSAPVVAPDDFK----RWTSMTEALTRSLRLFRVDDVIKCITFHPNYQRSAVEPRDGPAHMHLPPTSWMPKMMPSMLKNFGGGANGGDK--DFDYAVSDFQRRTPHPVINVLRGAQRTSLNGG 822
LR +V+R+V+G CP+ +ADLAG+GLE KGV PGP+GY S L FW LL T A+LS+ +LS P + P K R+ ++ E + R+L LFR D V + FHP Y R + D P++ HLPP SW+ M+ G D + D A+SD+QRR PH +IN+LR +Q + GG
Sbjct: 218 LRSFVDRVVIGCKACPYITTADLAGSGLEAKGVIPGPIGYRYSGTSDVCMALATFWNCICELLGTPEAELSSTVLSLPGIGPGKDKAAHDRFAAVVELVGRNLCLFRGDGVFGLVHFHPAYTREDIFLPDKPSYGHLPPQSWIRPML-----RMNGNVEEADSLTEDDIALSDYQRRAPHTMINILRASQLGAAVGG 409
BLAST of mRNA_P-wetherbeei_contig609.1.1 vs. uniprot
Match: B8C5W7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5W7_THAPS) HSP 1 Score: 135 bits (341), Expect = 2.550e-32 Identity = 73/199 (36.68%), Postives = 110/199 (55.28%), Query Frame = 1
Query: 241 VERLRGWVERIVVGLHMCPFTHSADLAGTGLEKKGVPPGPVGYPVSLAVSASGLLRDFWVETIGLLQTHPAQLSTLLLSAPVVAP----DDFKRWTSMTEALTRSLRLFRVDDVIKCITFHPNYQRSAVEPRDGPAHMHLPPTSWMPKMMPSMLKNFGGGANGGDK--DFDYAVSDFQRRTPHPVINVLRGAQRTSLNG 819
+ LR +++R+VVG+ CP+T SAD++ GLE +GV PGPVGY S + A + FW L+ LS+++LS P + +D R+ ++ E + R L LFR D + FHP Y R + P + PA+ HLPP SW+ ++ GG + D D A+S++QRR+PH IN+LR +Q + G
Sbjct: 202 ITALRSFIDRVVVGMEACPYTKSADISAVGLESRGVTPGPVGYRFSSSTDACHAMAVFWNCICELMGEPDQNLSSIMLSLPGIGSGSGVEDHNRFAAVVELVGRYLCLFRGDGSFGLVHFHPVYDRGMIHPLEMPAYGHLPPMSWLRPIL-----RMGGHEEEAQQLSDVDLALSNYQRRSPHTAINILRMSQVNAAAG 395
BLAST of mRNA_P-wetherbeei_contig609.1.1 vs. uniprot
Match: A0A7S1ZF72_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZF72_TRICV) HSP 1 Score: 135 bits (339), Expect = 5.480e-32 Identity = 73/195 (37.44%), Postives = 111/195 (56.92%), Query Frame = 1
Query: 250 LRGWVERIVVGLHMCPFTHSADLAGTGLEKKGVPPGPVGYPVSLAVSASGLLRDFWVETIGLLQTHPAQLSTLLLSAPVVAPDDFKR----WTSMTEALTRSLRLFRVDDVIKCITFHPNYQRSAVEPRDGPAHMHLPPTSWMPKMMPSMLKNFGGGANGGDKDFDYAVSDFQRRTPHPVINVLRGAQRTSLNGG 822
++ +V+R+VVG +CP+T ++++A GLE +GV P PV Y S + A +FW LL ++ST +LS P V +R + ++ E ++R+L LFR D V + FHP Y R + P+ PA+ HLPP SW+ P M +N A+ ++ + A+SD+QRR PH INVLR +Q + GG
Sbjct: 229 VKSFVDRLVVGADLCPYTRNSEIAAVGLEARGVRPAPVAYRYSGSGDACAAASEFWNCVCELLSVPEDEISTTILSLPAVGYGTDERAHGRFAAVMEMISRNLCLFRGDGVFGLVHFHPAYDRDGIVPKTKPAYGHLPPRSWL---RPMMRRNGNAEADTLTEE-ELALSDYQRRAPHTAINVLRASQLNAATGG 419
BLAST of mRNA_P-wetherbeei_contig609.1.1 vs. uniprot
Match: A0A7S2R3Y1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3Y1_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.030e-29 Identity = 78/205 (38.05%), Postives = 112/205 (54.63%), Query Frame = 1
Query: 241 VERLRGWVERIVVGLHMCPFTHSADLAGTGLEKKGVPPGPVGYPVSLAVSASGLLRDFWVETIGLLQTHPAQLSTLLLSAPVVA----PDDFKRWTSMTEALTRSLRLFRVDDVIKCITFHPNYQRSAVEPRDGPAHMHLPPTSWMPKMMPSMLKNFGGGANGGDKDFDYAVSDFQRRTPHPVINVLRGAQRTSLNGG-GAPSIL 840
V+ +R +V+RIV+ CP+T S D+A TGLE +GV PGPVGY S A + FW L+ +LST +LS P + + R+ ++ E ++R+L LFR D + + FHP Y R V P PA+ HLPP S+M ++ +N D+ + +SD+QRR+PH IN+LR T LN GA SI+
Sbjct: 195 VKAMRSFVDRIVIQEEACPYTKSVDMAATGLEPRGVKPGPVGYRYSSCTDACAAVGIFWNYICELINLPEEELSTTILSLPGIGRGTTEEAHDRFAAVVELVSRNLCLFRGDAMFGLVHFHPAYDRQRVHPTSKPAYGHLPPRSFMRAIL-RQNRNTKEADEFTDEQIN--LSDYQRRSPHTAINMLR---TTQLNAAAGAKSIV 393
BLAST of mRNA_P-wetherbeei_contig609.1.1 vs. uniprot
Match: A0A836CC65_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC65_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.360e-23 Identity = 63/143 (44.06%), Postives = 76/143 (53.15%), Query Frame = 1
Query: 433 LLQTHPAQLSTLLLSAPVVAPDDFKRWTSM-----------------------TEALTRSLRLFRVDDVIKCITFHPNYQRSAVEPRDGPAHMHLPPTSWMPKMMPSMLKNFGGGANGGDKDFDYAVSDFQRRTPHPVINVLR 792
+L PA +T LLSAP AP F W + TE +T SL+LF + D+IK I FHP+Y R+AVEP + HLPP +WMP MM S LK +DFDY+VSDFQRR P P INVLR
Sbjct: 1 MLGETPADKATFLLSAPAFAPR-FATWVTXXXXXXXXXXXXXXXXXXXXXXAYTELMTSSLKLFGISDIIKTIVFHPDYSRAAVEPSNSLKAGHLPPLAWMPNMMRSALKGLLA------EDFDYSVSDFQRRAPCPAINVLR 136
BLAST of mRNA_P-wetherbeei_contig609.1.1 vs. uniprot
Match: A0A7S2H0T1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0T1_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.190e-18 Identity = 52/142 (36.62%), Postives = 74/142 (52.11%), Query Frame = 1
Query: 403 LRDFWVETIGLLQTHPAQLSTLLLSAPVVAPDDF--KRWTSMTEALTRSLRLFRVDDVIKCITFHPNYQRSAVEPRDGPAHMHLPPTSWMPKMMPSMLKNFGGGANGGDKDFDYAVSDFQRRTPHPVINVLRGAQRTSLNGG 822
L W ++ T + LST LL P VA D +R+ + E L+RSL +F VD ++ + FHP Y R AVEP D P + H+PP W+P M+ S A+S++QRR P V+N+LR +Q + GG
Sbjct: 4 LSSCWEAFAEVVNTPESDLSTTLLCLPAVAHPDLGHERFRAFYELLSRSLLVFGVDKILSMVYFHPLYDRDAVEPSDSPVYGHIPPLHWLPPMLASTTFKTEDDLQLLRSPGACALSNYQRRAPCLVLNILRSSQLEAATGG 145
BLAST of mRNA_P-wetherbeei_contig609.1.1 vs. uniprot
Match: A0A836CB00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB00_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 4.400e-16 Identity = 46/80 (57.50%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 208 PPAPQSV-----ATPAVERLRGWVERIVVGLHMCPFTHSADLAGTGLEKKGVPPGPVGYPVSLAVSASGLLRDFWVETIG 432
PPAP A AV RLR WV R+VVGL +CPFTHS D A GLEK+GV G VGY +S A A+G+LRDFW T+G
Sbjct: 209 PPAPPVARGNPHARAAVTRLRQWVARVVVGLRVCPFTHSVDAAPRGLEKRGVEEGRVGYELSSATCAAGVLRDFWGHTLG 288 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig609.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig609.1.1 >prot_P-wetherbeei_contig609.1.1 ID=prot_P-wetherbeei_contig609.1.1|Name=mRNA_P-wetherbeei_contig609.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=270bp MGIDLGDDLADLRGVRVDVEEVEAGGPSGFRIRKVASTAAAEADEASTSTback to top mRNA from alignment at P-wetherbeei_contig609:1514..3237+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig609.1.1 ID=mRNA_P-wetherbeei_contig609.1.1|Name=mRNA_P-wetherbeei_contig609.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1724bp|location=Sequence derived from alignment at P-wetherbeei_contig609:1514..3237+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig609:1514..3237+ >mRNA_P-wetherbeei_contig609.1.1 ID=mRNA_P-wetherbeei_contig609.1.1|Name=mRNA_P-wetherbeei_contig609.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig609:1514..3237+ (Phaeothamnion wetherbeei SAG_119_79)back to top |