prot_P-wetherbeei_contig6080.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6080.1.1
Unique Nameprot_P-wetherbeei_contig6080.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length221
Homology
BLAST of mRNA_P-wetherbeei_contig6080.1.1 vs. uniprot
Match: A0A836CDC0_9STRA (ABC transporter transmembrane region 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDC0_9STRA)

HSP 1 Score: 184 bits (467), Expect = 2.990e-50
Identity = 127/233 (54.51%), Postives = 151/233 (64.81%), Query Frame = 0
Query:    1 LLAVWSVGYELAASFVMDVLGDFYLSISGRDAALFLRVLWRSLLITALVATLKAARSFAEEMCAVRWRRQLTRFLHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------AATLTAKSAEVCRQVLVLPGLCAYYTWYLTRLFGWTAPAACYLYFALAAAATRATLRRVVPLVYAQERADGAFRYGHAWLRVCAESVAFGGGAAAA-CERRRLDRSLEAAVAAQ 221
            LL   ++ YE+AASF+M V+GDFYL++S +D  LF+ VLWRS+L+ A+V TL+A R FA E CA++WR  L R+LH                XXXXXXXXXXXXXXXX           AA LT    EV ++ LV+PGL AYYTWY+  LFGW APAACY YFALA A     LRRVVP VY  ER +G FRY HAWLR  AE+VAF G AAAA  ER RL     +AV A+
Sbjct:  162 LLVTLAITYEVAASFIMTVIGDFYLAVSSQDWQLFMNVLWRSMLVVAVVGTLRACRDFACEACALQWRCNLVRYLHAHYLRGTVPYQLTRAGXXXXXXXXXXXXXXXXVDNPDQRIVSDAAALTTAMGEVIQKTLVVPGLLAYYTWYVAALFGWVAPAACYAYFALAGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAERHRLGYYFNSAVDAR 394          
BLAST of mRNA_P-wetherbeei_contig6080.1.1 vs. uniprot
Match: D7FQX4_ECTSI (ATP-binding cassette, sub-family D, member 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX4_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 1.710e-22
Identity = 59/113 (52.21%), Postives = 72/113 (63.72%), Query Frame = 0
Query:  109 AATLTAKSAEVCRQVLVLPGLCAYYTWYLTRLFGWTAPAACYLYFALAAAATRATLRRVVPLVYAQERADGAFRYGHAWLRVCAESVAFGG-GAAAACERRRLDRSLEAAVAA 220
            A  L A  A V  + LV PGL A+YTWYL  +FGW AP ACY+YF +A+A   A ++ VVP VY +++A+G FRY HAWLR  +ESV F G GA    ER RL  S  A V A
Sbjct:  269 AEALVAAFATVLHETLVAPGLVAFYTWYLVGMFGWVAPVACYVYFIVASAINWAVVKTVVPAVYWKDKAEGTFRYDHAWLRTHSESVVFCGVGAVEGRERDRLGESFNAVVTA 381          
BLAST of mRNA_P-wetherbeei_contig6080.1.1 vs. uniprot
Match: A0A0L0DIU2_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIU2_THETB)

HSP 1 Score: 66.2 bits (160), Expect = 4.780e-9
Identity = 59/207 (28.50%), Postives = 90/207 (43.48%), Query Frame = 0
Query:    1 LLAVWSVGYELAASFVMDVLGDFYLSISGRDAALFLRVLWRSLLITALVATLKAARSFAEEMCAVRWRRQLTRFLH------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATLTAKSAEVCRQVLVLPGLCAYYTWYLTRLFGWTAPAACYLYFALAAAATRATLRRVVPLVYAQERADGAFRYGHAWLRVCAESVAFGGGA 201
            LLAV S+  ++A  +V  +   FY  +S  +   F+ +LWRSL++T +VA L +  +    + A+  R  L+  L       R                                  LT    +     L+ P + A+YT+      GW  P   Y YF +A    +  L  +V  ++AQER +G +RYGHA +R  AES+AF  GA
Sbjct:   73 LLAV-SILEQVAVYYVGLLPSRFYSVLSSHNHDAFVALLWRSLVLTIIVALLNSLAALLASLIALGTRSALSGMLQSQYLASRAYYGLSRPALPRLDGVELVGIDNPDQRLVQDVDDLTTTLTQAVPPFLLAPFIIAFYTYVTYESMGWEGPLYIYGYFLVATIINKFLLSPIVAFIFAQERLEGNYRYGHARVRTYAESIAFLSGA 278          
BLAST of mRNA_P-wetherbeei_contig6080.1.1 vs. uniprot
Match: A0A6H5KC31_9PHAE (ABC transporter domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC31_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 3.100e-5
Identity = 31/60 (51.67%), Postives = 39/60 (65.00%), Query Frame = 0
Query:  162 ATLRRVVPLVYAQERADGAFRYGHAWLRVCAESVAFGG-GAAAACERRRLDRSLEAAVAA 220
            A ++ VVP VY +++A+G FRY HAWLR  +ESV F G GA    ER RL  S +  VAA
Sbjct:   25 AVVKTVVPAVYRKDKAEGTFRYDHAWLRTHSESVVFCGVGAVEGRERDRLGESFDVVVAA 84          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6080.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CDC0_9STRA2.990e-5054.51ABC transporter transmembrane region 2-domain-cont... [more]
D7FQX4_ECTSI1.710e-2252.21ATP-binding cassette, sub-family D, member 4 n=1 T... [more]
A0A0L0DIU2_THETB4.780e-928.50Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]
A0A6H5KC31_9PHAE3.100e-551.67ABC transporter domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011527ABC transporter type 1, transmembrane domainPFAMPF06472ABC_membrane_2coord: 13..216
e-value: 9.0E-35
score: 120.3
NoneNo IPR availablePANTHERPTHR11384:SF28ATP-BINDING CASSETTE SUB-FAMILY D MEMBER 4coord: 12..219
NoneNo IPR availablePANTHERPTHR11384ATP-BINDING CASSETTE, SUB-FAMILY D MEMBERcoord: 12..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6080contigP-wetherbeei_contig6080:2878..3540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6080.1.1mRNA_P-wetherbeei_contig6080.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6080 2878..3540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6080.1.1 ID=prot_P-wetherbeei_contig6080.1.1|Name=mRNA_P-wetherbeei_contig6080.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=221bp
LLAVWSVGYELAASFVMDVLGDFYLSISGRDAALFLRVLWRSLLITALVA
TLKAARSFAEEMCAVRWRRQLTRFLHRRYLTGTTPHRLATSANPGIAADN
ADQRIAADAATLTAKSAEVCRQVLVLPGLCAYYTWYLTRLFGWTAPAACY
LYFALAAAATRATLRRVVPLVYAQERADGAFRYGHAWLRVCAESVAFGGG
AAAACERRRLDRSLEAAVAAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011527ABC1_TM_dom