mRNA_P-wetherbeei_contig6076.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: T0S1B8_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S1B8_SAPDV) HSP 1 Score: 127 bits (319), Expect = 6.940e-28 Identity = 89/269 (33.09%), Postives = 113/269 (42.01%), Query Frame = 3
Query: 318 VLSCEPLAAVVTDFSSTCAYCFCNFVAEERRPLRCSGCQRLFYCRKICQRADWKDHRPECRAFAAF----GGRRVTPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERC 1112
VL A++ D +TCA+CF LRC+ C+ L YC + CQRADW H PEC+ A + G TPTV L ARL + S + D Q +R+M+ L H L + CN FTV + P+GI YP AA A NH+C P ATF GR L LR +RP+ G EL ++YT+L P VR+ ELA Y F C C RC
Sbjct: 26 VLRTTATASLPLDLGATCAHCFAP------AALRCARCKLLKYCSRNCQRADWSSHGPECKYLAPYMASAAGPSPTPTVLLAARL----HYSAIDPSD------------------------YATNLDAHAPDAIQRYRDMSALVLQILGATNVADTLPSM---------HRLLLTFAMLNCNAFTVCSPEQVPLGIGFYPLAA-AYNHACVPNCVATFCGRDLYLRALRPISRGDELTIAYTELVAPTSVRRLELATSYFFHCDCVRC 250
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: A0A6H5K4S3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4S3_9PHAE) HSP 1 Score: 127 bits (319), Expect = 2.790e-27 Identity = 97/350 (27.71%), Postives = 146/350 (41.71%), Query Frame = 3
Query: 270 RRP----CVLHSLAESLSK*VLSCEPLAAVVTDFSST--CAYCFCNFVAEER--RPLRCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRV-TPTVSLVARLLHCMYRSQR-ESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMAD------LXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNT----------------------------FTVTDDDLR-PVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERCRRPP--PEDAALDAFRCSDAACPG 1178
RRP C++ + L +++ +PL+AV+ + + CA CF + + R RCSGC R+ YC + CQ+ADW++HRPEC+A+A+ R T T+ L R+L+ + RS +G +E+ MA+ L A+ +LG+++CN F++ + L VG LY AA+A NHSC P +F G+TL LRC RP+ G E+ + T + +P R++ L Y F C CERC P ED L+AF C + C G
Sbjct: 18 RRPGRGRCLIAAKNLGLGDLIMAVQPLSAVLEESQARTHCARCFESMDKQHSGGRGSRCSGCSRICYCSRKCQKADWREHRPECKAWASNSSARTPTRTLRLAGRILNAINRSDNGNTGSMGTVNGGEDDGSSHAPSVREAVDELVHHNDDRSPEQKEEYMLMANFVARLCLAGCGDSKKGSALLWPSSQGRGLPGLVDAAYAVLGKLSCNVRNLRRLRSNTHVLSPTISLLMASSSRQVFSIAESALNGEVGCGLYLEAAAA-NHSCNPNAAQSFSGKTLSLRCTRPIRKGEEITIGITQIQKPGPARRESLRKTYFFECRCERCESPEGRAEDMRLEAFACPGSECTG 366
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: UPI001CF1FE39 (LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SMYD3-like n=4 Tax=Acropora TaxID=6127 RepID=UPI001CF1FE39) HSP 1 Score: 116 bits (290), Expect = 8.670e-24 Identity = 74/276 (26.81%), Postives = 118/276 (42.75%), Query Frame = 3
Query: 375 YCFCNFVAEERRPL-RCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRVTPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERCRRPPPEDAALDAFRCSDAACPGPVRRCRD 1199
YC C+F +R + RCS C+ YC + CQ+ WK+H+ EC R T V L+A+++H +R+ ++F+E++ + + + G+I CN+FT+ D +L+P+G+ +Y AS NHSC P A F G TL + + G EL +SYT+L P + R+++L + Y F C C +C ED + + +C D AC G + C D
Sbjct: 51 YC-CDFCFAKRDDIQRCSRCKFFRYCDRECQKKAWKEHKVECERIRQVSPNRPTDLVLLIAKIIH-----KRQLDKTFCADLSNLVSHRDQLRQSKKDTFSAILAVLVKFLGHKKFQEISP---------------------------PELFEIFGKITCNSFTICDSELQPLGVGIY-IKASYLNHSCNPNCVAVFNGTTLVIHATEHIKQGDELTISYTELLCPSYQRKEDLMSRYWFECQCSKCTSSVKEDRLMLSLKCFDPACSGALLHCLD 292
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: T2M5B1_HYDVU (SET and MYND domain-containing protein 3 (Fragment) n=2 Tax=Hydra vulgaris TaxID=6087 RepID=T2M5B1_HYDVU) HSP 1 Score: 114 bits (285), Expect = 4.240e-23 Identity = 76/288 (26.39%), Postives = 123/288 (42.71%), Query Frame = 3
Query: 318 VLSCEPLAAVVTDFSST---CAYCFCNFVAEERRPLRCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRVTPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERCRRPPPEDAALDAFRCSDAAC 1172
+L EPLA ++T+ C YC+ +E + L+CS C+ + YC K+CQ +DWK H+ EC+ ++ LV++L+ Y +++ + + F A + D + L+ + +CN+F +T+ +L +G ++ ++AS NHSC P ATF GR + +R I+P+ G ELMLSY + VRQ EL Y F C C C R D+ + + +CS C
Sbjct: 37 ILKEEPLACILTNSKYRGIRCDYCY----SEPEKLLKCSKCKFIAYCGKVCQASDWKMHKYECKCLTKSAPKQPPDFCRLVSQLIFNFYYNKKNT----------------------LINNLYANKGNISNARKEAFFTFAAVLVEYLQDVNININDI------------DIYGLMCKASCNSFAITNAELNSLGTGIF-SSASLFNHSCDPNCVATFNGRDISIRAIKPIAEGEELMLSYISILATSDVRQLELRESYMFTCKCTVCSRKEVNDSLMKSVKCSQPQC 285
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: A0A834CFK9_ORYME (N-lysine methyltransferase SMYD2-B n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A834CFK9_ORYME) HSP 1 Score: 107 bits (267), Expect = 2.990e-22 Identity = 77/275 (28.00%), Postives = 113/275 (41.09%), Query Frame = 3
Query: 303 SLSK*VLSCEPLAAV--VTDFSSTCAYCFCNFVAEERRPLRCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRV-TPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERCRR 1118
S+ + + SC ++V V++ S C CF ++ RC C++ FYC CQ+ADW H+ EC A AFG + T LVAR+L + Q+E D Q E D D L ++ACN FT+ DD+L +G A+YP A NHSC P++ TF G +R ++ + G E+++SY DL P R+ L Y+F C C C++
Sbjct: 27 SVGELLFSCPAYSSVLSVSERGSCCDLCF----RRKQGLARCGKCKKAFYCNASCQKADWAMHKLECSAMVAFGENWCPSETSRLVARIL-AKKKLQKERCDSEKILLIGEM---------------------------QSHLEDEDNEKKEKTEADIAGLSRFFSKHLEVPSHRDLLTLFSQVACNGFTIEDDELSHMGTAVYPDVALI-NHSCLPSVIVTFNGTKAEVRAVQDMKPGDEVLISYIDLLYPTDDRKSRLRESYYFTCECPECQK 268
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: UPI0009E1FAB5 (histone-lysine N-methyltransferase SMYD3-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1FAB5) HSP 1 Score: 110 bits (276), Expect = 3.180e-22 Identity = 76/274 (27.74%), Postives = 114/274 (41.61%), Query Frame = 3
Query: 369 CAYCFCNFVAEERRPLRCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRVTPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERCRRPPPEDAALDAFRCSDAACPGPVRR 1190
C +CF A+ RCS C+ YC + CQ+ WKDH+ EC + T V L+AR+ M + Q +SG +E D + + + L G+I+CN+FT+ D +L+P+G+ +Y S NHSC P A F G L + + G EL +SYT+L P + R+++L Y F CSC +C P ED + + +CS+ +C G V R
Sbjct: 55 CDFCF----AKSEDLQRCSKCKFARYCNRECQKNAWKDHKTECERILSVSPNIPTDLVRLMARI---MQQQQLQSGK----------------------------MSSIYTALVSHQKEFDDERKEAFSAIVTVLNQFVGERDFQKSSSGELFNLFGKISCNSFTICDAELQPLGVGIYQTP-SLLNHSCLPNCVAIFNGTKLLVHATEQIKQGDELAISYTELLCPSYQRKEDLKNRYLFGCSCSKCLSPLEEDGLMLSLQCSNFSCNGAVPR 292
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: B5X414_SALSA (SET and MYND domain-containing protein 3 n=20 Tax=Salmonidae TaxID=8015 RepID=B5X414_SALSA) HSP 1 Score: 109 bits (273), Expect = 4.790e-22 Identity = 77/262 (29.39%), Postives = 105/262 (40.08%), Query Frame = 3
Query: 330 EPLAAVVTDFSSTCAYCFCNFVAEERRPL-RCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRVTPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERC 1112
EPLA V S+TCA C+ R+ L RCS C+ YC CQ+ W DH+ EC+ + R T +V L AR++ +R S QE + A D LL ++ CN FT++D +LR +G+ LYP+ S NH CRP+ F G TL LR +R + EL +SY P R+ +L YHF C C+RC
Sbjct: 33 EPLAYCV---SNTCAKDLCHSCFSRRKTLLRCSQCKVARYCDVTCQKQAWSDHKRECKCLRSLHPRIPTDSVRLAARII---FRLLSPSQTSPGLCSLEEHESHLCDMGEERREGLSQLSSMLQLYIQQEVPNITQ-----------------------ELPAVDPLSLLAKLTCNCFTISDGELREIGVGLYPSM-SLLNHDCRPSCVMLFEGETLHLRAVRDMQPAEELTISYIGTLAPTRDRRTQLEEQYHFTCQCQRC 264
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: A0A673ZQ80_SALTR (SET and MYND domain containing 3 n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A673ZQ80_SALTR) HSP 1 Score: 111 bits (277), Expect = 6.490e-22 Identity = 77/262 (29.39%), Postives = 105/262 (40.08%), Query Frame = 3
Query: 330 EPLAAVVTDFSSTCAYCFCNFVAEERRPL-RCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRVTPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERC 1112
EPLA V S+TCA FC+ R+ L RCS C+ YC CQ+ W DH+ EC+ + R T +V L AR++ +R S QE + D LL ++ CN FT++D +LR +G+ LYP+ S NH CRP+ F G TL LR +R + EL +SY P R+ +L YHF C C+RC
Sbjct: 33 EPLACCV---SNTCAKDFCHSCFSRRKTLLRCSQCKVARYCDVTCQKQAWSDHKRECKCLRSLHPRIPTDSVRLAARII---FRLLSPSQTSPGLCSLEEHESHLCDMGEERREGLSQLSSMLQLYIQQEVPNITQ-----------------------ELPTVDPLSLLAKLTCNCFTISDGELREIGVGLYPSM-SLLNHDCRPSCVMLFEGETLHLRAVRDMQPAEELTISYIGTLAPTRDRRTQLEEQYHFTCQCQRC 264
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: A0A8C5AYK1_GADMO (N-lysine methyltransferase SMYD2-A-like n=7 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5AYK1_GADMO) HSP 1 Score: 108 bits (271), Expect = 1.130e-21 Identity = 82/286 (28.67%), Postives = 119/286 (41.61%), Query Frame = 3
Query: 318 VLSCEPLAAVVT--DFSSTCAYCFCNFVAEERRPLRCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRV-TPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWL-LLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERCRRPPPEDAALDAFRCSD 1163
+ SC + V++ + S C YCF + RC C++ YC CQRADW H+ EC + A+G + TV LVAR+L M ++Q+E E+A L H A L L ++ACN FTV D++L +G A+YP A NHSC+P++ TF G T +R + P+ E+M+SY D+ P R L Y+F C C+ C+ + A L + SD
Sbjct: 32 IFSCPAYSFVLSAKERGSYCEYCF----NRKEGLARCGKCKKACYCNATCQRADWSMHKLECSSMVAYGPNWCPSETVRLVARILASM-KTQKERNASEKLMLIGEMQTHVEDVDNARREVNES--------------EIAGLHRFYSKHLDFPD--------------HSALLALFSQVACNGFTVEDEELSHMGTAVYPDVALI-NHSCQPSVIVTFKGTTAEVRAVTPMKKMDEVMISYIDILYPTDDRNSRLRDSYYFTCDCQECKTQSKDKAKLKVRKRSD 283
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: A0A2I4C9Q0_9TELE (N-lysine methyltransferase SMYD2 n=1 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4C9Q0_9TELE) HSP 1 Score: 108 bits (270), Expect = 1.150e-21 Identity = 79/285 (27.72%), Postives = 117/285 (41.05%), Query Frame = 3
Query: 318 VLSCEPLAAVV--TDFSSTCAYCFCNFVAEERRPLRCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRV-TPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERCRRPPPEDAALDAFRCSD 1163
+LSC A+V+ T+ + C +CF + +C C++ YC K CQ+ DW H+ EC A AAFG + T LVAR+L + ++Q+E Q E D D L ++ACN FTV DD+L +G A+YP A NHSC P++ T+ + +R ++ + G E+++SY DL P R L Y+F C C CR ++A L + SD
Sbjct: 28 LLSCPAYASVLSLTERGNCCEFCF----TRKEGLAKCGKCKKACYCNKKCQKGDWAMHKLECSAMAAFGENWCPSETTRLVARIL-AVKKTQKEP---------------------------CVSEKLMTIGELQSHLEDEDNEKRERTEADIAGLYRFYSKHLEIPDHKDLLHLFSQVACNGFTVEDDELSQMGTAIYPDVALI-NHSCLPSVIVTYNETSAEVRAVQDMKPGDEVLISYIDLLYPTDDRNNRLRESYYFTCDCRECRSRSKDNAKLKVRKQSD 279 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6076.1.1 >prot_P-wetherbeei_contig6076.1.1 ID=prot_P-wetherbeei_contig6076.1.1|Name=mRNA_P-wetherbeei_contig6076.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=406bp MYRSQRESGDGGGGGGGKAEKTAGTESAAAQITTLVHHMDDRPPATRQEFback to top mRNA from alignment at P-wetherbeei_contig6076:496..2282+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6076.1.1 ID=mRNA_P-wetherbeei_contig6076.1.1|Name=mRNA_P-wetherbeei_contig6076.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1787bp|location=Sequence derived from alignment at P-wetherbeei_contig6076:496..2282+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6076:496..2282+ >mRNA_P-wetherbeei_contig6076.1.1 ID=mRNA_P-wetherbeei_contig6076.1.1|Name=mRNA_P-wetherbeei_contig6076.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1218bp|location=Sequence derived from alignment at P-wetherbeei_contig6076:496..2282+ (Phaeothamnion wetherbeei SAG_119_79)back to top |