prot_P-wetherbeei_contig6066.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6066.1.2
Unique Nameprot_P-wetherbeei_contig6066.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length429
Homology
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: D7FLF9_ECTSI (Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF9_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 1.070e-36
Identity = 154/409 (37.65%), Postives = 201/409 (49.14%), Query Frame = 0
Query:    1 MDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQLAAAAMAKAKQAKAIKAKQATKIAAAKVEDGDGGGKADGXXXXXXXXXXXXXXXXXXXXXXXXXXALEAAAPADGAEAVKMEEXXXXXXXXXXXXXGETGKAGDDAIAVDEEATRAPRVATVLEETAAPKGEAAAAVPAAEIATDMKAEPEKEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVELIPMYQEARRIFLEPEVYAPSSFDLKWTDPDEEGLTEFLVTKMGFNADRVASGIKRLKDARKLTGQRRMDSFFKPVEAPGGSSSGAKRKPVLEPKGKSKGPA 409
            MDALTFQTPKLLR+   S +   +++V           LLQGL ++ E+FVD+C+LCGCDYT S++GIGPKKAL  ++Q+G+IE+++KHLD  KYPVP+ W            +  A++A+  K                             XXXXXXXXXXXXXXXXXXXX  E A P    EAV  E+                 K GD     D +  +A       +   +   EAA      E  T+  AE E+E                                             +  PMY++AR +FL+PEV     + LKWTDPDE GL +FLV + GFNA+RVASGI +LK ARK   Q+RMDSFF  +  P   ++GAK KP  + K  +KG A
Sbjct:  184 MDALTFQTPKLLRRMTFSGSNQPILEVDYQ-------KLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDAKKYPVPDDW------------LEPAERAERRK-----------------------------XXXXXXXXXXXXXXXXXXXXXAETANP----EAVSEEDVQQ--------------KEGDS----DSDKAKAD----TPDHGVSVAKEAADVSAKRERETEDAAESEQEMD-------------------------------------------DTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFFSVIPNP---NAGAK-KPAPKAKAGAKGKA 471          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A835Z748_9STRA (Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z748_9STRA)

HSP 1 Score: 147 bits (370), Expect = 9.950e-36
Identity = 160/404 (39.60%), Postives = 200/404 (49.50%), Query Frame = 0
Query:    1 MDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQLAAAAMAKAKQAKAIKAKQATKIAAAKVEDGDGGGKADGXXXXXXXXXXXXXXXXXXXXXXXXXXALEAAAPADGAEAVKMEEXXXXXXXXXXXXXGETGKAGDDAIAVDEEATRAPRVATVLEETAAPKGEAAAAVPAAEIATDMKAEPEKEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVELIPMYQEARRIFLEPEVYAPSSFDLKWTDPDEEGLTEFLVTKMGFNADRVASGIKRLKDARKLTGQRRMDSFFKPVEAPGGSSSGAKRKPVLEPKGK 404
            MDALTF+TPKL+R+   +           P+  +    +L+GLG+T E+FVD+CILCGCDYTDS+RGIGPKKAL  IK++ SIE++LKHLD+ K+ +P  W                     I  +  T +A           K   XXXXXXXXXXXXXXXXXXXXXXXXXX                  XXXXXXXXXXX                      P  A V++E          AVPA                                                           + IPMY+EARR+FLEP+V+  +++DLKWTDP+ E LT FLV KM FNA+RVA+GIK+LK+ARK  GQ RMD+FFK    P G+  G KR   ++  GK
Sbjct:  185 MDALTFRTPKLIRRLTTNKNQ--------PIMEVDYAGVLEGLGLTHEEFVDMCILCGCDYTDSIRGIGPKKALMLIKKHHSIEEILKHLDRSKHGIPADW---------------------IPGETPTPLA-----------KPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------PPAAPVVQE----------AVPA-----------------------------------------------------------DKIPMYKEARRLFLEPDVFPANTYDLKWTDPNVEELTTFLVEKMQFNAERVAAGIKKLKEARKKGGQTRMDTFFKSTAPPPGTKVGVKRPAEVKKGGK 457          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A7S2SD31_9STRA (Flap endonuclease 1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD31_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.880e-31
Identity = 140/419 (33.41%), Postives = 180/419 (42.96%), Query Frame = 0
Query:    1 MDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQLAAAAMAKAKQAKAIKAKQATKIAAAKVEDGDGGGKADGXXXXXXXXXXXXXXXXXXXXXXXXXXALEAAAPADGAEAVKMEEXXXXXXXXXXXXXGETGKAGDDAIAVDEEATRAPRVATVLEETAAPKGEAAAAVPAAEIATDMKAEPEKEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVELIPMYQEARRIFLEPEVYAPSSFDLKWTDPDEEGLTEFLVTKMGFNADRVASGIKRLKDARKLTGQRRMDSFFKPVEAPGGSSSGAKRKPVLEPKGKSKGPATKKGKTTGGK 419
            MDALTFQTP LL++   S       K   P+ ++    LL GLGITQEQFVD+CILCGCDY D   GIGPK AL  +++YG++E ++K+LDK K+P+P  W+  + K                                                                        PAD A A     XXXXXXXXXXXX       G   +  +E  T A       E  A P+       PAA   T    EPEKE+                                               P++ E R++F  P V  P +  LKWT+PDEEGL +FLV + GFNA+RV+SGIK+LK+ +    Q+RMDSFFK      G  S +KRK        +K   +KKGK + GK
Sbjct:  207 MDALTFQTPHLLKRMTFSA------KQQAPIMQISHDKLLHGLGITQEQFVDLCILCGCDYCDRPSGIGPKTALKLVRKYGNLENIVKNLDKKKHPLPVGWERPAPK------------------------------------------------------------------------PADPAPAAXXXXXXXXXXXXXXXX-----SEGGSEVTHEENETDAQ------EPDAKPE-------PAASAETAQ--EPEKEQPWE--------------------------------------------PLFVEVRQLFHTPLVQDPVNCSLKWTEPDEEGLIKFLVEEKGFNAERVSSGIKKLKEMKGKGTQQRMDSFFKST----GMVSSSKRKAAP-----AKAKPSKKGKISKGK 474          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: W7U4Z8_9STRA (Flap endonuclease 1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4Z8_9STRA)

HSP 1 Score: 128 bits (321), Expect = 5.550e-29
Identity = 120/391 (30.69%), Postives = 164/391 (41.94%), Query Frame = 0
Query:    2 DALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQLAAAAMAKAKQAKAIKAKQATKIAAAKVEDGDGGGKADGXXXXXXXXXXXXXXXXXXXXXXXXXXALEAAAPADGAEAVKMEEXXXXXXXXXXXXXGETGKAGDDAIAVDEEATRAPRVATVLEETAAPKGEAAAAVPAAEIATDMKAEPEKE-EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVELIPMYQEARRIFLEPEVYAPSSFDLKWTDPDEEGLTEFLVTKMGFNADRVASGIKRLKDARKLTGQRRMDSFFKPVEAPGGSSS 391
            D LTF TP+LLR  M S     + ++           +L+GLG+T  QF+D+CIL GCDYT ++RGIGPK AL  IK+YG IE +L+++ KGKY VP  W            + + K  K      +   + + VE+GD                                     A P D   A K  E                 KAG +    ++E                 +G  AAA+ A E+A D   EP K  EG                                         EV  +P Y  AR +F++PE++ P+  + KW +P+E GL  FL+  +GFN DRV SGI +LK +R    Q+R+DSFFKP     GSSS
Sbjct:  186 DTLTFATPRLLR-NMTSAGDNPIKEIDYK-------KMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEW------------LPRIKVRKPSSLPPSAPPSVSPVEEGD------------------------------------KAMPGD-ENACKTAEVDS--------------KAGMEG---EKE-----------------EGIKAAAIVAREVAPD---EPAKSVEG-----------------------------------------EVMEMPAYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQQKRLDSFFKPS----GSSS 437          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A183NIX9_9TREM (XPGI domain-containing protein n=2 Tax=Schistosoma TaxID=6181 RepID=A0A183NIX9_9TREM)

HSP 1 Score: 108 bits (269), Expect = 1.170e-24
Identity = 57/109 (52.29%), Postives = 76/109 (69.72%), Query Frame = 0
Query:    1 MDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQL 109
            MDAL F TP LLR    S A     K+ I  F L   ++L+GLG+T +QF+D+CIL GCDY D++RGIGPKKAL+ + +Y SI+ +LK++DK KYPVP+ W  E  K+L
Sbjct:    1 MDALAFGTPVLLRHLTFSEAR----KMAIQEFNLT--SVLEGLGLTMDQFIDLCILLGCDYVDTIRGIGPKKALDLLHKYQSIDCVLKNIDKSKYPVPDDWPYEDAKKL 103          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A1I8FWP4_9PLAT (Flap endonuclease 1 n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8FWP4_9PLAT)

HSP 1 Score: 110 bits (274), Expect = 7.530e-24
Identity = 60/109 (55.05%), Postives = 76/109 (69.72%), Query Frame = 0
Query:    1 MDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQL 109
            MDALTF  P LLR+   S A     K+ I  FRL     LQ + ++QEQFVD+CIL GCDY DSVRG+GPKKAL F+++YG I+ +LKHLDK KY VPE+W  +  ++L
Sbjct:   64 MDALTFGAPVLLRRLTFSEAK----KMPIQEFRLDKA--LQEMSMSQEQFVDLCILLGCDYCDSVRGVGPKKALEFLRKYGDIDNVLKHLDKDKYQVPENWQYQEARRL 166          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A183RKJ8_9TREM (XPGI domain-containing protein n=1 Tax=Schistosoma rodhaini TaxID=6188 RepID=A0A183RKJ8_9TREM)

HSP 1 Score: 104 bits (259), Expect = 2.000e-23
Identity = 56/109 (51.38%), Postives = 75/109 (68.81%), Query Frame = 0
Query:    1 MDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQL 109
            MDAL F TP LLR    S A     K+ I  F L   ++L+GLG+T +QF+D+CIL GCDY D++RGIGPKKAL+ + +Y SI+ +LK++DK KY VP+ W  E  K+L
Sbjct:    1 MDALAFGTPVLLRHLTFSEAR----KMAIQEFNLT--SVLEGLGLTMDQFIDLCILLGCDYVDTIRGIGPKKALDLLHKYQSIDCVLKNIDKSKYIVPDDWPYEDAKKL 103          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A267FUU4_9PLAT (Flap endonuclease 1 n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267FUU4_9PLAT)

HSP 1 Score: 111 bits (278), Expect = 2.200e-23
Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 0
Query:    1 MDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQL 109
            MDALTF  P LLR+   S A     K+ I  FRL     LQ + +TQEQFVD+CIL GCDY DSVRG+GPKKAL F+++YG I+ +LKHLDK KY VPE+W  +  ++L
Sbjct:  208 MDALTFGAPVLLRRLTFSEAK----KMPIQEFRLDKA--LQEMSMTQEQFVDLCILLGCDYCDSVRGVGPKKALEFLRKYGDIDNVLKHLDKDKYQVPENWQYQEARRL 310          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A1C8V7E6_9CUCU (Flap endonuclease 1 (Fragment) n=1 Tax=Triozastus marshalli TaxID=1689898 RepID=A0A1C8V7E6_9CUCU)

HSP 1 Score: 104 bits (260), Expect = 2.620e-23
Identity = 53/109 (48.62%), Postives = 77/109 (70.64%), Query Frame = 0
Query:    1 MDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQL 109
            MDALTF +  +LR    S A        +P+  +    +L+GL ++ +QFVD+CIL GCDYTDS++GIGPKK++  IK++ SIE++LKHLDK KYP PE+W+ E+ ++L
Sbjct:   19 MDALTFGSNVVLRHMTYSEARK------MPIHEIHLSKVLEGLQLSHQQFVDLCILMGCDYTDSIKGIGPKKSIELIKKHSSIEEILKHLDKEKYPPPENWNYENARKL 121          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A3Q9JQH2_9CUCU (Flap endonuclease 1 (Fragment) n=1 Tax=Curculionidae gen. sp. CoMim02 TaxID=2174889 RepID=A0A3Q9JQH2_9CUCU)

HSP 1 Score: 103 bits (258), Expect = 3.890e-23
Identity = 54/109 (49.54%), Postives = 74/109 (67.89%), Query Frame = 0
Query:    1 MDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQL 109
            MDALTF +  LLR    S A        +P+  +    +LQ L +TQ++F+D+CIL GCDYTDS+RGIGPKK++ +IK+Y SIE++LKH+DK KYP PE W+    + L
Sbjct:   15 MDALTFGSDVLLRHLTFSEARK------MPIQEIHLKIVLQELDLTQKEFIDLCILMGCDYTDSIRGIGPKKSIEYIKKYKSIEEILKHIDKXKYPPPEDWNFAGARAL 117          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF9_ECTSI1.070e-3637.65Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835Z748_9STRA9.950e-3639.60Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2SD31_9STRA2.880e-3133.41Flap endonuclease 1 n=1 Tax=Rhizochromulina marina... [more]
W7U4Z8_9STRA5.550e-2930.69Flap endonuclease 1 n=2 Tax=Nannochloropsis gadita... [more]
A0A183NIX9_9TREM1.170e-2452.29XPGI domain-containing protein n=2 Tax=Schistosoma... [more]
A0A1I8FWP4_9PLAT7.530e-2455.05Flap endonuclease 1 n=2 Tax=Macrostomum lignano Ta... [more]
A0A183RKJ8_9TREM2.000e-2351.38XPGI domain-containing protein n=1 Tax=Schistosoma... [more]
A0A267FUU4_9PLAT2.200e-2355.96Flap endonuclease 1 n=2 Tax=Macrostomum lignano Ta... [more]
A0A1C8V7E6_9CUCU2.620e-2348.62Flap endonuclease 1 (Fragment) n=1 Tax=Triozastus ... [more]
A0A3Q9JQH2_9CUCU3.890e-2349.54Flap endonuclease 1 (Fragment) n=1 Tax=Curculionid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 103..123
NoneNo IPR availableCOILSCoilCoilcoord: 276..307
NoneNo IPR availableGENE3D1.10.150.20coord: 45..110
e-value: 2.6E-27
score: 96.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..428
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..221
NoneNo IPR availablePANTHERPTHR11081:SF9FLAP ENDONUCLEASE 1coord: 1..116
coord: 306..414
NoneNo IPR availableCDDcd09907H3TH_FEN1-Eukcoord: 48..102
e-value: 1.32667E-30
score: 110.714
IPR008918Helix-hairpin-helix motif, class 2SMARTSM00279HhH_4coord: 47..80
e-value: 1.1E-15
score: 68.0
IPR006084XPG/Rad2 endonucleasePANTHERPTHR11081FLAP ENDONUCLEASE FAMILY MEMBERcoord: 306..414
coord: 1..116
IPR0362795'-3' exonuclease, C-terminal domain superfamilySUPERFAMILY478075' to 3' exonuclease, C-terminal subdomaincoord: 312..385
IPR0362795'-3' exonuclease, C-terminal domain superfamilySUPERFAMILY478075' to 3' exonuclease, C-terminal subdomaincoord: 45..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6066contigP-wetherbeei_contig6066:37..3015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6066.1.2mRNA_P-wetherbeei_contig6066.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6066 1..3414 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6066.1.2 ID=prot_P-wetherbeei_contig6066.1.2|Name=mRNA_P-wetherbeei_contig6066.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=429bp
MDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQF
VDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPES
WDLESLKQLAAAAMAKAKQAKAIKAKQATKIAAAKVEDGDGGGKADGGGG
AASGEGGAASGECGGGANASDGAALEAAAPADGAEAVKMEEAAAAAEDAK
PAAEGETGKAGDDAIAVDEEATRAPRVATVLEETAAPKGEAAAAVPAAEI
ATDMKAEPEKEEGAAAAAAATAAAPAAAAKAGAAAKEEEEEEEEEEELAA
VEEEEVELIPMYQEARRIFLEPEVYAPSSFDLKWTDPDEEGLTEFLVTKM
GFNADRVASGIKRLKDARKLTGQRRMDSFFKPVEAPGGSSSGAKRKPVLE
PKGKSKGPATKKGKTTGGKAGNKAGGKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008918HhH2
IPR006084XPG/Rad2
IPR0362795-3_exonuclease_C_sf