prot_P-wetherbeei_contig6055.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig6055.3.1
Unique Name	prot_P-wetherbeei_contig6055.3.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	187

Homology

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BLAST of mRNA_P-wetherbeei_contig6055.3.1 vs. uniprot
Match: A0A6L5FER5_9HYPH (Decarboxylase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FER5_9HYPH)

HSP 1 Score: 255 bits (651), Expect = 2.990e-84
Identity = 128/174 (73.56%), Postives = 144/174 (82.76%), Query Frame = 0

Query:   11 MPWSNIFLKALKDNDVRLVSYVPDNVLTPLIAGVTSDNYFMSVCATREDEAIGLAAGGWMGGMKSVVMMQTSGFALVANALASLTVPSQIPTVMIISERGTMGEFQIAQTLVARTMRPVLDTLGITHHTLTDEATLPFIVDRSIKQAFMTQTPVAFILSPLLTGGNPAGNAKLK 184
            M WS   L+ LKDNDVRLV+YVPDNVLTPL+ GVT+DNYFM+V ATREDEA+G+AAG WMGG+K  VMMQTSGFA+  N LASL VP QIP +MIISERGT+GEF   Q LVARTMRPVLD++ +THHTLTDE TL F+VD+SIKQA  TQ PVA ILSPLLTGGNP   AKLK
Sbjct:    1 MTWSETILQTLKDNDVRLVTYVPDNVLTPLLRGVTADNYFMAVGATREDEALGIAAGAWMGGIKGCVMMQTSGFAVAPNTLASLIVPFQIPAIMIISERGTLGEFNSGQALVARTMRPVLDSVAVTHHTLTDEKTLRFMVDKSIKQAVSTQAPVALILSPLLTGGNPVAEAKLK 174

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BLAST of mRNA_P-wetherbeei_contig6055.3.1 vs. uniprot
Match: A0A1Q7BEH9_9PROT (Decarboxylase n=5 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BEH9_9PROT)

HSP 1 Score: 252 bits (644), Expect = 3.370e-83
Identity = 123/173 (71.10%), Postives = 145/173 (83.82%), Query Frame = 0

Query:   11 MPWSNIFLKALKDNDVRLVSYVPDNVLTPLIAGVTSDNYFMSVCATREDEAIGLAAGGWMGGMKSVVMMQTSGFALVANALASLTVPSQIPTVMIISERGTMGEFQIAQTLVARTMRPVLDTLGITHHTLTDEATLPFIVDRSIKQAFMTQTPVAFILSPLLTGGNPAGNAKL 183
            M W++ FL+ LK+NDVRLV+YVPDNVLTPLI G  +DNYFMS+ ATREDEA+G  AG +MGG++ V MMQTSGFAL+ANALASL VP QIP ++ +SERGT+GEF I Q  VARTMRP LD++ +THHTLTDEAT+P IVD+SIKQAF TQ+PV FI SPLLTGGNPA  AKL
Sbjct:    1 MTWADTFLRTLKENDVRLVTYVPDNVLTPLIDGAAADNYFMSIGATREDEAVGTLAGAYMGGLRGVAMMQTSGFALIANALASLIVPYQIPAIIAVSERGTLGEFNIGQVTVARTMRPTLDSIAVTHHTLTDEATMPLIVDKSIKQAFTTQSPVVFIFSPLLTGGNPAAAAKL 173

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BLAST of mRNA_P-wetherbeei_contig6055.3.1 vs. uniprot
Match: A0A6N7GPV6_9HYPH (Decarboxylase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GPV6_9HYPH)

HSP 1 Score: 248 bits (633), Expect = 1.650e-81
Identity = 124/173 (71.68%), Postives = 138/173 (79.77%), Query Frame = 0

Query:   11 MPWSNIFLKALKDNDVRLVSYVPDNVLTPLIAGVTSDNYFMSVCATREDEAIGLAAGGWMGGMKSVVMMQTSGFALVANALASLTVPSQIPTVMIISERGTMGEFQIAQTLVARTMRPVLDTLGITHHTLTDEATLPFIVDRSIKQAFMTQTPVAFILSPLLTGGNPAGNAKL 183
            MPWS  FL   K NDVR +SYVPDNVLTPLI GVTSDNYF+SV ATREDEA+G+ AG WMGG+K  VMMQTSGFA+  N LASL VP QIP +++ISERGTMGEF I Q  VAR MRP LDTL + +HTL DE+ LPFI+D SIKQA  TQ PVAFILSPLLTGGNP  +AKL
Sbjct:    1 MPWSETFLDVFKKNDVRFISYVPDNVLTPLIKGVTSDNYFISVNATREDEAMGMVAGAWMGGLKGAVMMQTSGFAVTPNTLASLIVPYQIPAILVISERGTMGEFNIGQVAVARIMRPTLDTLSVENHTLDDESKLPFILDASIKQAVKTQAPVAFILSPLLTGGNPVAHAKL 173

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BLAST of mRNA_P-wetherbeei_contig6055.3.1 vs. uniprot
Match: UPI0015569291 (thiamine pyrophosphate-binding protein n=3 Tax=Bradyrhizobium sp. 83002 TaxID=2734909 RepID=UPI0015569291)

HSP 1 Score: 204 bits (518), Expect = 7.260e-64
Identity = 102/163 (62.58%), Postives = 122/163 (74.85%), Query Frame = 0

Query:   13 WSNIFLKALKDNDVRLVSYVPDNVLTPLIAGVTSDNYFMSVCATREDEAIGLAAGGWMGGMKSVVMMQTSGFALVANALASLTVPSQIPTVMIISERGTMGEFQIAQTLVARTMRPVLDTLGITHHTLTDEATLPFIVDRSIKQAFMTQTPVAFILSPLLTGG 175
            W  I    LK N++ LV YVPD VLTPLIAG+ SD +F +    RE+EA+G+ AG WMGG +  ++MQTSGFA +AN LASL VPSQIP +M++SERGT+GEF + Q+LV RTMRPVLD L + HHT+T    L FIVDRSIKQA  TQ PVA ILSPLLTGG
Sbjct:   20 WHEIVQATLKRNELNLVPYVPDRVLTPLIAGLHSDPFFTTFATAREEEAVGILAGAWMGGRRGALLMQTSGFATLANVLASLVVPSQIPLIMLVSERGTLGEFNVGQSLVCRTMRPVLDALAMEHHTMTRLDELEFIVDRSIKQAVATQAPVALILSPLLTGG 182

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BLAST of mRNA_P-wetherbeei_contig6055.3.1 vs. uniprot
Match: H0TFS5_9BRAD (Putative Sulfopyruvate decarboxylase (Alpha subunit) n=1 Tax=Bradyrhizobium sp. STM 3843 TaxID=551947 RepID=H0TFS5_9BRAD)

HSP 1 Score: 203 bits (516), Expect = 1.370e-63
Identity = 102/163 (62.58%), Postives = 122/163 (74.85%), Query Frame = 0

Query:   13 WSNIFLKALKDNDVRLVSYVPDNVLTPLIAGVTSDNYFMSVCATREDEAIGLAAGGWMGGMKSVVMMQTSGFALVANALASLTVPSQIPTVMIISERGTMGEFQIAQTLVARTMRPVLDTLGITHHTLTDEATLPFIVDRSIKQAFMTQTPVAFILSPLLTGG 175
            W  I L+ L+ N+VRLV YVPD VLTPLIAG+ +D YF +    RE+EA+G+ +G WMGG +  ++MQTSGFA +AN LASL VP QIP VM +SERGT+GEF   Q+LV RTMRPVLD+L + HHT+T    L F VDRSIKQA  TQ PVA ILSPLLTGG
Sbjct:   17 WHGIVLRTLRRNEVRLVPYVPDRVLTPLIAGLHADPYFSTFATAREEEAVGILSGAWMGGARGAMLMQTSGFATLANVLASLVVPCQIPLVMFVSERGTLGEFNYGQSLVCRTMRPVLDSLAMEHHTMTRLDELEFTVDRSIKQAVATQAPVALILSPLLTGG 179

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BLAST of mRNA_P-wetherbeei_contig6055.3.1 vs. uniprot
Match: A0A7Y4H185_9BRAD (Decarboxylase n=4 Tax=Bradyrhizobium TaxID=374 RepID=A0A7Y4H185_9BRAD)

HSP 1 Score: 202 bits (515), Expect = 2.280e-63
Identity = 102/163 (62.58%), Postives = 121/163 (74.23%), Query Frame = 0

Query:   13 WSNIFLKALKDNDVRLVSYVPDNVLTPLIAGVTSDNYFMSVCATREDEAIGLAAGGWMGGMKSVVMMQTSGFALVANALASLTVPSQIPTVMIISERGTMGEFQIAQTLVARTMRPVLDTLGITHHTLTDEATLPFIVDRSIKQAFMTQTPVAFILSPLLTGG 175
            W  I L+ LK NDVRL+ YVPD VLTPLI  + +D +F +  A RE+EA+G+ AG WMGGM+  V+MQTSGFA +AN LASL +P QIP +M +SERGT+GEF   Q+LV RTMRPVLD+L + HHT T      FIVDRSIKQA  TQ PVA ILSPLLTGG
Sbjct:   22 WHGIVLQTLKRNDVRLIPYVPDRVLTPLIKSLHADPFFTTFPAAREEEAVGIVAGAWMGGMRGAVLMQTSGFATLANVLASLAIPYQIPLIMFVSERGTLGEFNYGQSLVCRTMRPVLDSLAMEHHTATRLDEFEFIVDRSIKQAVTTQAPVALILSPLLTGG 184

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BLAST of mRNA_P-wetherbeei_contig6055.3.1 vs. uniprot
Match: A0A1M3PBR4_9PROT (Decarboxylase n=1 Tax=Rhodospirillales bacterium 70-18 TaxID=1895826 RepID=A0A1M3PBR4_9PROT)

HSP 1 Score: 201 bits (512), Expect = 3.640e-63
Identity = 97/163 (59.51%), Postives = 122/163 (74.85%), Query Frame = 0

Query:   13 WSNIFLKALKDNDVRLVSYVPDNVLTPLIAGVTSDNYFMSVCATREDEAIGLAAGGWMGGMKSVVMMQTSGFALVANALASLTVPSQIPTVMIISERGTMGEFQIAQTLVARTMRPVLDTLGITHHTLTDEATLPFIVDRSIKQAFMTQTPVAFILSPLLTGG 175
            W  I    LK ++VRLV+YVPDNVLTPLI  +T D+YF S   TRE+EA+G+ AG WMGG + +V+MQTSGFA + N LASL VP Q+P +M++SERGT+GEF + Q LVARTMRPVLD++ + HHT++      FIVDRS++QA  TQ P   ILSPLLTGG
Sbjct:    4 WFEIIRDTLKRHEVRLVAYVPDNVLTPLIRAITEDDYFTSFVTTREEEAVGIVAGAWMGGTRGIVLMQTSGFATLPNVLASLAVPFQVPVLMLVSERGTLGEFNLGQALVARTMRPVLDSIAVEHHTISRLDECEFIVDRSVRQAVATQQPACLILSPLLTGG 166

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BLAST of mRNA_P-wetherbeei_contig6055.3.1 vs. uniprot
Match: A0A1H1KG29_9HYPH (Sulfopyruvate decarboxylase, alpha subunit n=3 Tax=unclassified Hyphomicrobiales TaxID=41292 RepID=A0A1H1KG29_9HYPH)

HSP 1 Score: 201 bits (512), Expect = 6.310e-63
Identity = 101/168 (60.12%), Postives = 123/168 (73.21%), Query Frame = 0

Query:   13 WSNIFLKALKDNDVRLVSYVPDNVLTPLIAGVTSDNYFMSVCATREDEAIGLAAGGWMGGMKSVVMMQTSGFALVANALASLTVPSQIPTVMIISERGTMGEFQIAQTLVARTMRPVLDTLGITHHTLTDEATLPFIVDRSIKQAFMTQTPVAFILSPLLTGGNPAGN 180
            W  +    LK NDVRL++YVPD VLTPLI  +  D++F +   TRE+EA+G+ AG WMGGM+  V+MQTSGFA +ANALASL VP QIP +M +SERGT+GEF + Q +V RTMRPVLD LGI  H++T    L FIVDRSI+QA  TQ P A ILSPLLTGG   G+
Sbjct:   21 WHAVIHDTLKANDVRLITYVPDRVLTPLIRSLHEDDFFTAFATTREEEALGIVAGAWMGGMRGAVLMQTSGFATLANALASLAVPYQIPLLMFVSERGTLGEFNLGQAMVCRTMRPVLDALGIEQHSITRLDELEFIVDRSIRQAVATQAPCALILSPLLTGGKSFGS 188

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BLAST of mRNA_P-wetherbeei_contig6055.3.1 vs. uniprot
Match: UPI001BA65488 (thiamine pyrophosphate-binding protein n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=UPI001BA65488)

HSP 1 Score: 201 bits (511), Expect = 6.920e-63
Identity = 100/163 (61.35%), Postives = 122/163 (74.85%), Query Frame = 0

Query:   13 WSNIFLKALKDNDVRLVSYVPDNVLTPLIAGVTSDNYFMSVCATREDEAIGLAAGGWMGGMKSVVMMQTSGFALVANALASLTVPSQIPTVMIISERGTMGEFQIAQTLVARTMRPVLDTLGITHHTLTDEATLPFIVDRSIKQAFMTQTPVAFILSPLLTGG 175
            W  + L+ LK NDVRL+ YVPD VLT LI  + +D +F +    RE+EA+G+ +G WMGG+K  V+MQTSGFA +AN LASL VPSQIP +M +SERGT+GEF + Q+LV RTMRPVLD+L + HHT T    L F+VDRSIKQA  TQ PVA ILSPLLTGG
Sbjct:   13 WPEVVLQTLKRNDVRLIPYVPDRVLTGLIKSLHADPFFTTFPTAREEEAVGIVSGAWMGGLKGAVLMQTSGFATLANVLASLVVPSQIPLIMFVSERGTLGEFNLGQSLVCRTMRPVLDSLAMEHHTCTRLDELEFVVDRSIKQAVTTQAPVALILSPLLTGG 175

[Close]

BLAST of mRNA_P-wetherbeei_contig6055.3.1 vs. uniprot
Match: A0A7C2QS53_9HYPH (Decarboxylase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QS53_9HYPH)

HSP 1 Score: 201 bits (510), Expect = 9.200e-63
Identity = 101/163 (61.96%), Postives = 119/163 (73.01%), Query Frame = 0

Query:   13 WSNIFLKALKDNDVRLVSYVPDNVLTPLIAGVTSDNYFMSVCATREDEAIGLAAGGWMGGMKSVVMMQTSGFALVANALASLTVPSQIPTVMIISERGTMGEFQIAQTLVARTMRPVLDTLGITHHTLTDEATLPFIVDRSIKQAFMTQTPVAFILSPLLTGG 175
            W  I L   K N+V+LV+YVPD VLTPLI  + +D YF      RE+EA+G+ +G WMGG +  V+MQTSGF  +ANALASL VP QIP VM++SERGT+GEF   Q LVARTMRPVLD+L + HHT+T    L F VDRSIKQA  TQ PVA ILSPLLTGG
Sbjct:   11 WHEIVLATFKSNEVKLVTYVPDRVLTPLIKALHADRYFTCFATAREEEAVGIVSGAWMGGTRGAVLMQTSGFGTLANALASLAVPYQIPLVMLVSERGTLGEFNWGQALVARTMRPVLDSLAVEHHTITRLDELEFTVDRSIKQAVATQAPVALILSPLLTGG 173

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig6055.3.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig6055.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6L5FER5_9HYPH	2.990e-84	73.56	Decarboxylase n=1 Tax=Hyphomicrobiales bacterium T...	[more]
A0A1Q7BEH9_9PROT	3.370e-83	71.10	Decarboxylase n=5 Tax=unclassified Alphaproteobact...	[more]
A0A6N7GPV6_9HYPH	1.650e-81	71.68	Decarboxylase n=1 Tax=Hyphomicrobiales bacterium T...	[more]
UPI0015569291	7.260e-64	62.58	thiamine pyrophosphate-binding protein n=3 Tax=Bra...	[more]
H0TFS5_9BRAD	1.370e-63	62.58	Putative Sulfopyruvate decarboxylase (Alpha subuni...	[more]
A0A7Y4H185_9BRAD	2.280e-63	62.58	Decarboxylase n=4 Tax=Bradyrhizobium TaxID=374 Rep...	[more]
A0A1M3PBR4_9PROT	3.640e-63	59.51	Decarboxylase n=1 Tax=Rhodospirillales bacterium 7...	[more]
A0A1H1KG29_9HYPH	6.310e-63	60.12	Sulfopyruvate decarboxylase, alpha subunit n=3 Tax...	[more]
UPI001BA65488	6.920e-63	61.35	thiamine pyrophosphate-binding protein n=1 Tax=Bra...	[more]
A0A7C2QS53_9HYPH	9.200e-63	61.96	Decarboxylase n=1 Tax=Hyphomicrobiales bacterium T...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012001	Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain	PFAM	PF02776	TPP_enzyme_N	coord: 14..164 e-value: 2.4E-6 score: 27.3
None	No IPR available	GENE3D	3.40.50.970		coord: 9..173 e-value: 7.1E-9 score: 37.4
None	No IPR available	PANTHER	PTHR42818	SULFOPYRUVATE DECARBOXYLASE SUBUNIT ALPHA	coord: 15..170
None	No IPR available	CDD	cd07035	TPP_PYR_POX_like	coord: 16..168 e-value: 1.64639E-15 score: 68.3271
IPR029061	Thiamin diphosphate-binding fold	SUPERFAMILY	52518	Thiamin diphosphate-binding fold (THDP-binding)	coord: 9..168

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig6055	contig	P-wetherbeei_contig6055:2118..2678 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig6055.3.1	mRNA_P-wetherbeei_contig6055.3.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig6055 2118..2678 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig6055.3.1 ID=prot_P-wetherbeei_contig6055.3.1|Name=mRNA_P-wetherbeei_contig6055.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=187bp
MSVLPRSLWRMPWSNIFLKALKDNDVRLVSYVPDNVLTPLIAGVTSDNYF
MSVCATREDEAIGLAAGGWMGGMKSVVMMQTSGFALVANALASLTVPSQI
PTVMIISERGTMGEFQIAQTLVARTMRPVLDTLGITHHTLTDEATLPFIV
DRSIKQAFMTQTPVAFILSPLLTGGNPAGNAKLKPA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012001	Thiamin_PyroP_enz_TPP-bd_dom
IPR029061	THDP-binding