mRNA_P-wetherbeei_contig605.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig605.6.1
Unique NamemRNA_P-wetherbeei_contig605.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig605.6.1 vs. uniprot
Match: A0A835ZEW0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEW0_9STRA)

HSP 1 Score: 102 bits (253), Expect = 7.910e-23
Identity = 52/97 (53.61%), Postives = 62/97 (63.92%), Query Frame = 1 
Query:    7 LVAAVLSGHAALPDEAARRRSAAADDARRADFGLRPRDTHYLGEMQWNYNRQIAGLAGCLDDALERRLRLAEAIYNDAGDQRRGFPGGPDTYRRREY 297
            L AAV +G A LPDEA R +    +   RAD GLRPRD HY+G+MQW Y R IA + G +D  L++ L L E IYNDA   R   PG PD YR+REY
Sbjct:  361 LFAAVCNGSAQLPDEAERLQCMQQEAQTRADMGLRPRDAHYMGDMQWGYIRDIAQMGGVMDAQLDKELALREKIYNDASAARPPQPGDPDVYRKREY 457
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BLAST of mRNA_P-wetherbeei_contig605.6.1 vs. uniprot
Match: A0A6H5JZC1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZC1_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.930e-14
Identity = 35/59 (59.32%), Postives = 43/59 (72.88%), Query Frame = 1 
Query:  190 DALERRLRLAEAIYNDAGDQRRGFPGGPDTYRRREYHVDWAAGTFTTSWADRKAEVSAP 366
            + L + L + EAIYNDAGD R GFPGGPD YRRR+Y VDW +G F+ ++ADRKA    P
Sbjct:  523 ERLLKVLNVMEAIYNDAGDNRPGFPGGPDDYRRRQYRVDWDSGRFSVTYADRKANGEGP 581
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BLAST of mRNA_P-wetherbeei_contig605.6.1 vs. uniprot
Match: A0A1Z5JQ22_FISSO (Dimethylaniline monooxygenase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQ22_FISSO)

HSP 1 Score: 56.2 bits (134), Expect = 1.200e-6
Identity = 35/98 (35.71%), Postives = 50/98 (51.02%), Query Frame = 1 
Query:  112 PRDTHYLGEMQWNYNRQIAGLAGCLDDA-------LERRLRLAEAIYNDAGDQRRG-FPGGPDTYRRREYHVDWAAGTFTTSWADRKAEVSAPLAAAT 381
            P DTH+LG+ QW Y RQ+A  A  L+ +       +   +   +AIY+ AG  R+G  PG  D YR   Y  + +  TFT SW+   +     L+A T
Sbjct:  371 PEDTHFLGDAQWEYCRQLARFANLLEASEDDNGNDISNYIATNKAIYDHAGKARKGALPGSVDAYRSLCYERNDSLQTFT-SWSCEDSNTLKDLSACT 467
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BLAST of mRNA_P-wetherbeei_contig605.6.1 vs. uniprot
Match: A0A1I8J0M9_9PLAT (Flavin-containing monooxygenase n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8J0M9_9PLAT)

HSP 1 Score: 53.5 bits (127), Expect = 9.800e-6
Identity = 34/85 (40.00%), Postives = 48/85 (56.47%), Query Frame = 1 
Query:    1 SRLVAAVLSGHAALPDEAARRRSAAADDARRADFGLRPRDTHYLGEMQWNYNRQIAGLAGC----------LDDA-LERRLRLAE 222
            S+L+ A+L G   LPD+A    ++  D+A +   G+  R  H LG+ QW+YN Q+A LAGC           DD  LER+LRL +
Sbjct:  250 SKLIEAILLGQLQLPDDA--ESTSLRDEAEKLASGVPARHLHLLGDDQWDYNDQLADLAGCQRLPVVMRLIYDDVRLERKLRLVD 332
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BLAST of mRNA_P-wetherbeei_contig605.6.1 vs. uniprot
Match: A0A267EB21_9PLAT (Uncharacterized protein (Fragment) n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267EB21_9PLAT)

HSP 1 Score: 53.5 bits (127), Expect = 1.040e-5
Identity = 34/85 (40.00%), Postives = 48/85 (56.47%), Query Frame = 1 
Query:    1 SRLVAAVLSGHAALPDEAARRRSAAADDARRADFGLRPRDTHYLGEMQWNYNRQIAGLAGC----------LDDA-LERRLRLAE 222
            S+L+ A+L G   LPD+A    ++  D+A +   G+  R  H LG+ QW+YN Q+A LAGC           DD  LER+LRL +
Sbjct:  347 SKLIEAILLGQLQLPDDA--ESTSLRDEAEKLASGVPARHLHLLGDDQWDYNDQLADLAGCQRLPVVMRLIYDDVRLERKLRLVD 429
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig605.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835ZEW0_9STRA7.910e-2353.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JZC1_9PHAE1.930e-1459.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Z5JQ22_FISSO1.200e-635.71Dimethylaniline monooxygenase n=1 Tax=Fistulifera ... [more]
A0A1I8J0M9_9PLAT9.800e-640.00Flavin-containing monooxygenase n=1 Tax=Macrostomu... [more]
A0A267EB21_9PLAT1.040e-540.00Uncharacterized protein (Fragment) n=3 Tax=Macrost... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig605contigP-wetherbeei_contig605:6061..6444 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSH9
Preferred nameFMO1
PFAMsFMO-like,NAD_binding_8
Model size384
Max annot lvl2759|Eukaryota
KEGG rclassRC02233
KEGG koko:K00485
KEGG ReactionR08266
KEGG Pathwayko00982,ko01120,map00982,map01120
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004497,GO:0004499,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005789,GO:0005829,GO:0006457,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016020,GO:0016491,GO:0016705,GO:0016709,GO:0031984,GO:0034975,GO:0036094,GO:0042175,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0055114,GO:0097159,GO:0098827,GO:1901265,GO:1901363
Exons1
Evalue1.97e-14
EggNOG OGsCOG2072@1|root,KOG1399@2759|Eukaryota
Ec32 ortholog descriptionsimilar to flavin-containing monooxygenase family protein
Ec32 orthologEc-11_003800.2
EC1.14.13.8
DescriptionN,N-dimethylaniline monooxygenase activity
Cds size384
COG categoryP
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186885.559584-CDS-P-wetherbeei_contig605:6060..64441683186885.559584-CDS-P-wetherbeei_contig605:6060..6444Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig605 6061..6444 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig605.6.1prot_P-wetherbeei_contig605.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig605 6061..6444 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig605.6.1

>prot_P-wetherbeei_contig605.6.1 ID=prot_P-wetherbeei_contig605.6.1|Name=mRNA_P-wetherbeei_contig605.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=128bp
SRLVAAVLSGHAALPDEAARRRSAAADDARRADFGLRPRDTHYLGEMQWN
YNRQIAGLAGCLDDALERRLRLAEAIYNDAGDQRRGFPGGPDTYRRREYH
VDWAAGTFTTSWADRKAEVSAPLAAATT
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mRNA from alignment at P-wetherbeei_contig605:6061..6444-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig605.6.1 ID=mRNA_P-wetherbeei_contig605.6.1|Name=mRNA_P-wetherbeei_contig605.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=384bp|location=Sequence derived from alignment at P-wetherbeei_contig605:6061..6444- (Phaeothamnion wetherbeei SAG_119_79)
TCCCGCCTTGTGGCTGCCGTCCTGTCGGGCCACGCGGCGCTACCGGACGA
GGCCGCCCGCCGCCGCTCCGCCGCCGCCGACGACGCCCGCCGCGCCGACT
TCGGCCTCCGCCCCCGCGACACCCATTACTTGGGAGAGATGCAGTGGAAT
TACAACCGTCAGATCGCGGGGCTGGCCGGCTGCTTGGACGACGCGCTAGA
GCGGCGGCTGCGGCTGGCAGAGGCCATCTACAACGACGCGGGTGATCAGC
GACGGGGCTTCCCCGGCGGGCCCGACACGTACCGGCGGCGCGAGTACCAT
GTAGACTGGGCGGCCGGAACGTTTACGACGAGCTGGGCGGACCGCAAGGC
AGAGGTTTCGGCGCCGTTGGCGGCGGCGACGACG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig605:6061..6444-

>mRNA_P-wetherbeei_contig605.6.1 ID=mRNA_P-wetherbeei_contig605.6.1|Name=mRNA_P-wetherbeei_contig605.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=384bp|location=Sequence derived from alignment at P-wetherbeei_contig605:6061..6444- (Phaeothamnion wetherbeei SAG_119_79)
TCCCGCCTTGTGGCTGCCGTCCTGTCGGGCCACGCGGCGCTACCGGACGA
GGCCGCCCGCCGCCGCTCCGCCGCCGCCGACGACGCCCGCCGCGCCGACT
TCGGCCTCCGCCCCCGCGACACCCATTACTTGGGAGAGATGCAGTGGAAT
TACAACCGTCAGATCGCGGGGCTGGCCGGCTGCTTGGACGACGCGCTAGA
GCGGCGGCTGCGGCTGGCAGAGGCCATCTACAACGACGCGGGTGATCAGC
GACGGGGCTTCCCCGGCGGGCCCGACACGTACCGGCGGCGCGAGTACCAT
GTAGACTGGGCGGCCGGAACGTTTACGACGAGCTGGGCGGACCGCAAGGC
AGAGGTTTCGGCGCCGTTGGCGGCGGCGACGACG
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