mRNA_P-wetherbeei_contig6046.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6046.1.1
Unique NamemRNA_P-wetherbeei_contig6046.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6046.1.1 vs. uniprot
Match: D7FI53_ECTSI (SMK-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI53_ECTSI)

HSP 1 Score: 449 bits (1154), Expect = 7.530e-149
Identity = 259/508 (50.98%), Postives = 329/508 (64.76%), Query Frame = 1
Query:   55 GAYLQRLLDVFSDAEDLEDEASLRLLCEAMKRVVALNDQALVEALLSDRFFLQVAGVFEHDPELKAPAFHRDFLTNTVKFCQVMPIEDPEVVARIHQNFRISFLKDMLLRPMLDDAIVGTLNAMTCYNNAEIVAAVGLGGAGDYAERVFGVLRDPDLPR--QRRASGLAFLRELFAMVRTLQLSAREAFYRAGFPEPRLFDVLVPVLRDPAADVSERMACMDILLSTLTHEPGLLRNHILHRGSHP--PPXXHASXXXXXXXXXXXXXXXXXXXXXXXXXSLLGRRLGGQASEVVRMLLDTDTMETQSERDAFLGAFYDVYVNWLVEPFWTANPNPSLLP--GPPARHPAAPLAKGGGGIGDAKGGRALTSPPPSVGMGAAAENGAAGAEAGAHLGDDESASA----KAAKGHACDLLSFCVRAHTYRMKYFVLRHSIVARVLRLLQYRDKFLKLGAVRFLRSCVGMKDEFYNRYIIKNNLFAPVFALLKENAGRDNLINSAVVELVE 1548
            G Y+ +LL VF+D EDL+DE SLR+LC   K +V LND  L+E LL+D  F+ +AGVFE+D ELK    HR FLT T  F QV+PI D EVV +IHQNFRI+FLKD LLRPM+DDA+VGTLN++T +NN EIV ++      DY   VF +L +P+  R  Q+R   L FLRELF M +TLQ++ R+AFYR  + E  LF+V +PVL+DP A V ER ACM++LL++LTH+P L R HIL  G HP  PP  +                           S  G  LG  A ++ RM LDT+TME Q +RD FLG FY+ YV+WLVEPFW  + +   +   G  AR      +KGG G G A G R           G    + ++        G  ++ S     + ++GH CDLLSFCVR+HT+RMKYFVLR+++V+RVLRLL   DK+L+L AVRFLRSCVG+KDEFYNRY++KNNL APVFAL +EN GRDNLINSAV+ELVE
Sbjct:  150 GEYVGKLLKVFNDCEDLDDEESLRVLCHIFKAIVGLNDGTLLEVLLADNLFVDMAGVFEYDLELKEKGDHRKFLTQTASFKQVLPIPDEEVVQKIHQNFRITFLKDALLRPMMDDAVVGTLNSLTYFNNTEIVQSL---QHTDYVRDVFLLLNEPENGRGGQKRRDILMFLRELFNMAKTLQVAPRDAFYRHLWDEVPLFEVFIPVLKDPDASVMERTACMEVLLASLTHDPALFRTHILKEGGHPLLPPTVNNQAKSTS--------------------SAAGGGLGSGA-KICRMALDTETMEGQPDRDTFLGVFYEHYVHWLVEPFWVGDLSNEGMGANGEVARG----SSKGGKGDGKAGGFR----------QGGVGSDSSSSXXXXXXXGGGDARSKMRMLQVSRGHICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLINSAVIELVE 619          
BLAST of mRNA_P-wetherbeei_contig6046.1.1 vs. uniprot
Match: A0A6H5KKJ6_9PHAE (SMK-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ6_9PHAE)

HSP 1 Score: 323 bits (829), Expect = 1.730e-96
Identity = 213/519 (41.04%), Postives = 267/519 (51.45%), Query Frame = 1
Query:   19 RDAVTAQLLADDGAYLQRLLDVFSDAEDLEDEASLRLLCEAMKRVVALNDQALVEALLSDRFFLQVAGVFEHDPELKAPAFHRDFLTNTVKFCQVMPIEDPEVVARIHQNFRISFLKDMLLRPMLDDAIVGTLNAMTCYNNAEIVAAVGLGGAGDYAERVFGVLRDPDLPRQRRASGLAFLRELFAMVRTLQLSAREAFYRAGFPEPRLFDVLVPVLRDPAADVSERMACMDILL-----STLTHEPGLLRNHILHRGSHPPPXXHASXXXXXXXXXXXXXXXXXXXXXXXXXSLLGRRLGGQASEVVRMLLDTDTMETQSERDAFLGAFYDVYVNWLVEPFWTANPNPSLLP--GPPARHPAAPLAKGGGGIGDAKGGRALTSPPPSVGMGAAAENGAAGAEAGAHLGDDESASA--KAAKGHACDLLSFCVRAHTYRMKYFVLRHSIVARVLRLLQYRDKFLKLGAVRFLRSCVGMKDEFYNRYIIKNNLFAPVFALLKENAGRDNLINSAVVELVE 1548
            +++    L    G Y+ +LL VF+D EDL+DE SLR+LC   K +V LND  L+E LL+D  F+ +AGVFE+D ELK    HR FLT T  F QV+PI D EVV +IHQNFRI+FLKD LLRPM+DDA+VGTLN++T +NN EIV            +RV    ++       R  G                                            A  S    C  +L       T   + G+L                                                    QA+E+ RM LDT+TME Q +RD FLG FY+ YV+WLVEPFW  + +   +   G  AR      +KGG G G A G R         G                  GD  S     + ++GH CDLLSFCVR+HT+RMKYFVLR+++V+RVLRLL   DK+L+L AVRFLRSCVG+KDEFYNRY++KNNL APVFAL +EN GRDNLINSAV+ELVE
Sbjct:  248 KESYAGSLSEKSGEYVGKLLKVFNDCEDLDDEESLRVLCHIFKAIVGLNDGTLLEVLLADNLFVDMAGVFEYDLELKEKGNHRKFLTQTASFKQVLPIPDEEVVQKIHQNFRITFLKDALLRPMMDDAVVGTLNSLTYFNNTEIV------------QRVANKKKNTGEEHICRGGGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXQCATSSSVSECRALLFWVIRRLTTDQDTGVLL---------------------------------------------------QAAEICRMALDTETMEGQPDRDTFLGVFYEHYVHWLVEPFWLGDLSNEGMGANGEVARG----SSKGGKGDGKAGGFR--------QGXXXXXXXXXXXXXXXXXXGDARSKMRMLQVSRGHICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLINSAVIELVE 691          
BLAST of mRNA_P-wetherbeei_contig6046.1.1 vs. uniprot
Match: A0A061R721_9CHLO (Protein phosphatase 4 regulatory subunit 3 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R721_9CHLO)

HSP 1 Score: 268 bits (685), Expect = 3.250e-77
Identity = 177/511 (34.64%), Postives = 266/511 (52.05%), Query Frame = 1
Query:   16 ERDAVTAQLLADDGAYLQRLLDVFSDAEDLEDEASLRLLCEAMKRVVALNDQALVEALLSDRFFLQVAGVFEHDPELKAPAFHRDFLTNTVKFCQVMPIEDPEVVARIHQNFRISFLKDMLLRPMLDDAIVGTLNAMTCYNNAEIVAAVGLGGAGDYAERVFGVLRDPDLPRQRRASGLAFLRELFAMVRTLQLSAREAFYRAGFPEPRLFDVLVPVLRDPAADVSERMACMDILLSTLTHEPGLLRNHILHRGSHPPPXXHASXXXXXXXXXXXXXXXXXXXXXXXXXSLLGRRLGGQASEVVRMLLDTDTMETQSERDAFLGAFYDVYVNWLVEPFWTANPNPSLLPGPPARHPAAPLAKGGGGIGDAKGGRALTSPPPSVGMGAAAENGAAGAEAGAHLGDDESASAKAAKGHACDLLSFCVRAHTYRMKYFVLRHSIVARVLRLLQYRDKFLKLGAVRFLRSCVGMKDEFYNRYIIKNNLFAPVFALLKENAGRDNLINSAVVELVE 1548
            +R+ V  QL+  +G YL++LLD+F   EDLED  SL  L + +K  + LN+ AL E LLS+   + V G  E+DPELK    +R+FL   V F +V+PI+D +V A+IHQ +RIS++KD++L  +LDDA   TL ++  +NN E++ A  L     +   +FG L+  +         +AFL+EL ++ + LQ + R   + A   +  +F+V+  V++   A++  R+   DILLSTL H+P  LR  ++ +  H                                 S L   L  Q  E++RMLLD ++ME  +E++ FL  FYD Y+  LV+                       + K G                                      G  ES  + A  G   +LL FCV+ H+YR+KY++LR+++V +VLRLL+   K+L + AVRFLR+C+G+KDEFYNRY+++NNL  PV     EN  R NL+NSA++ELVE
Sbjct:  166 QRENVARQLI--EGDYLRKLLDLFRTCEDLEDRDSLNHLYKIVKGAIMLNETALFELLLSEDNVMDVVGALEYDPELKEQQKYREFLRERVVFKEVVPIKDQDVKAKIHQTYRISYIKDVILPRVLDDATFATLASLMLFNNVEVLMA--LQSDSTFLSELFGRLKSVNPQESDWRDLVAFLQELCSLAKHLQATPRMQLF-AKLVDLGMFEVVTQVMKSGNAEL--RLRGSDILLSTLQHDPSPLRTFLIKQDGH---------------ALFTLLVDSLVDDYPKSGSELCGGLQEQVLEMLRMLLDPESMEQSAEKNEFLELFYDEYIGKLVQ--------------------TLRVTKTGS-------------------------------------GSSESQPSPATLGTIVELLCFCVQNHSYRIKYYILRNNVVEKVLRLLKCSQKWLVVAAVRFLRTCIGVKDEFYNRYLVRNNLLEPVVKAFIENGSRYNLLNSAILELVE 597          
BLAST of mRNA_P-wetherbeei_contig6046.1.1 vs. uniprot
Match: A0A7S0HVM9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HVM9_9EUKA)

HSP 1 Score: 268 bits (684), Expect = 1.130e-76
Identity = 183/502 (36.45%), Postives = 253/502 (50.40%), Query Frame = 1
Query:   61 YLQRLLDVFSDAEDLEDEASLRLLCEAMKRVVALNDQALVEALLSDRFFLQVAGVFEHDPELKAPAF-HRDFLTNTVKFCQVMPIEDPEVVARIHQNFRISFLKDMLLRPMLDDAIVGTLNAMTCYNNAEIVAAVGLGGAGDYAERVFGVLRDPDLPRQRRASGLAFLRELFAMVRTLQLSAREAFYRAGFPEPRLFDVLVPVLRDPAADVSERMACMDILLSTLTHEPGLLRNHILHRGSHPPPXXHASXXXXXXXXXXXXXXXXXXXXXXXXXSLLGRRLGG----QASEVVRMLLDTDTMETQSERDAFLGAFYDVYVNWLVEPF-WTANPNPSLLPGPPARHPAAPLAKGGGGIGDAKGGRALTSPPPSVGMGAAAENGAAGAEAGAHLGDDESASAKAAKGHACDLLSFCVRAHTYRMKYFVLRHSIVARVLRLLQYRDKFLKLGAVRFLRSCVGMKDEFYNRYIIKNNLFAPVFALLKENAGRDNLINSAVVELVE 1548
            Y+ +L+ +F+  EDLE+   L  L    K +V LND  + E LL +   + V G  E+DPEL   +  HR FL   VKF QV+PI D   V +IHQNF +SF+KD++L   LDD     LN +   NN +IV+   L    DY +RV   + D +   + R   L  L+EL  +V+ LQL  R AFYR  F E   F  L   L  P+  +  R+A +D+LLST+ HEP LLR H+L++                                     +L  R GG    Q +EV+R LLD + ME + E+D  L  FYD +V+ L  P         + + G     P      GGGG                                          S  + + H C+LLSFCV+ H+YR+KYF+LR++++A+VLRL + RDK L L A+RF R+C+G+KDEFYNRYI+KN  F PV A L  N  RDNL++S+++EL E
Sbjct:  209 YVLQLVTLFNTVEDLENVPDLHHLFHIFKGLVLLNDTGVYEELLREDLIVSVIGALEYDPELSCHSVNHRAFLKEKVKFNQVVPIGDAPTVRKIHQNFHVSFIKDVVLPRALDDHTFAALNQIAFLNNVQIVSH--LCNDADYLKRVCEKIGDGEQNAEERHDSLRLLQELCGVVKQLQLFNRSAFYRK-FVEHGFFVPLSSCLMQPSPCM--RLASIDVLLSTVQHEPSLLRQHVLNQ-------------------------RPECEMMHALLHVLTERDGGGEKPQVAEVLRSLLDPEGMEGR-EQDDLLNLFYDEFVHKLARPIAGRTEAGTAPMNGDAEAEPEVEEDVGGGGD-----------------------------------------SVLSTQQHVCELLSFCVQKHSYRIKYFILRNNVLAKVLRLARSRDKCLVLAALRFFRTCIGLKDEFYNRYIVKNKCFEPVLAQLLRNRTRDNLVHSSILELFE 638          
BLAST of mRNA_P-wetherbeei_contig6046.1.1 vs. uniprot
Match: A0A7S0JCV2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JCV2_9EUKA)

HSP 1 Score: 265 bits (676), Expect = 3.340e-76
Identity = 184/499 (36.87%), Postives = 259/499 (51.90%), Query Frame = 1
Query:   61 YLQRLLDVFSDAEDLEDEASLRLLCEAMKRVVALNDQALVEALLSDRFFLQVAGVFEHDPELKAPAF---HRDFLTNTVKFCQVMPIEDPEVVARIHQNFRISFLKDMLLRPMLDDAIVGTLNAMTCYNNAEIVAAVGLGGAGDYAERVFGVLRDPDLPRQRRASGLAFLRELFAMVRTLQLSAREAFYRAGFPEPRLFDVLVPVLRDPAADVSERMACMDILLSTLTHEPGLLRNHILHRGSHPPPXXHASXXXXXXXXXXXXXXXXXXXXXXXXXSLLGRRLGGQASEVVRMLLDTDTMETQSERDAFLGAFYDVYVNWLVEPFWTANPNPSLLPGPPARHPAAPLAKGGGGIGDAKGGRALTSPPPSVGMGAAAENGAAGAEAGAHLGDDESASAKAAKGHACDLLSFCVRAHTYRMKYFVLRHSIVARVLRLLQYRDKFLKLGAVRFLRSCVGMKDEFYNRYIIKNNLFAPVFALLKENAGRDNLINSAVVELVE 1548
            Y+  L+ +F  AEDLE+   L+LL    K +V LND A+ + LL D   L V G  EHDP+L A A    HR FLT  V+F +V+PI D  ++ +IHQN+R+SFLKD++L   LDD     LN +T +NN +I++A  L    +Y + +   L+D  L  +     L  L+EL  + + LQL  R AFYR  F E   F  L   L    ++   R+  +++LL+++ HEP LLR  IL +   PPP                              S+ G     QA+EV+R LLD D M+ + E+D FL  FY+ +   L EP        +      A  P AP                L +  PS                 +  GD E  S++    H C+LLSF V  H+YR+KYF+LR++++ +VL+L Q RDK L L A+RF R+CVG+KDEFYNRYI+KN  F  V   L+ N  RDNL++S+++EL E
Sbjct:  177 YIPELVKLFGVAEDLENVEDLQLLFRIFKGLVMLNDSAVYDLLLRDDLVLGVVGALEHDPDLAANACKVRHRVFLTEVVQFKEVVPINDEAILKKIHQNYRLSFLKDVVLPRALDDHAFAALNQITFFNNMQIISA--LSSDPNYLQALCSKLQDTTLDSEALLEALRLLQELCTISKQLQLYNRTAFYRK-FCEHSCFAPLAACLMH--SEPPHRLCALEVLLASVQHEPSLLRQFILQQ---PPPQREM-----------------LQALVHVVISVGGSGEKPQAAEVLRALLDPDGMDGR-EQDDFLNLFYEEFAAQLAEPLTGKISRGTAPVAAKADEPTAP--------------NGLLAAEPSS----------------SSDGDGEVLSSRQ---HICELLSFFVTKHSYRIKYFILRNNVLHKVLKLAQERDKGLVLAALRFFRTCVGLKDEFYNRYIVKNKCFENVIFQLQRNCYRDNLVHSSILELFE 616          
BLAST of mRNA_P-wetherbeei_contig6046.1.1 vs. uniprot
Match: A0A7S2D4C1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D4C1_9STRA)

HSP 1 Score: 265 bits (678), Expect = 3.570e-76
Identity = 183/529 (34.59%), Postives = 270/529 (51.04%), Query Frame = 1
Query:    4 SSISERDAVTAQLLADDGAYLQRLLDVFSDAEDLEDEASLRLLCEAMKRVVALNDQALVEALLSDRFFLQVAGVFEHDPELKAPAFHRDFLTNTVKFCQVMPIEDPEVVARIHQNFRISFLKDMLLRPMLDDAIVGTLNAMTCYNNAEIVAAVGLGGAGDYAERVFGVLRDPDLPR---------QRRASGLAFLRELFAMVRTLQLSAREAFYRAGFPEPRLFDVLVPVLRDPAAD---VSERMACMDILLSTLTHEPGL-LRNHILHRGSHPP-PXXHASXXXXXXXXXXXXXXXXXXXXXXXXXSLLGRRLGGQASEVVRMLLDTDTMETQSERDAFLGAFYDVYVNWLVEPFWTANPNPSLLPGPPARHPAAPLAKGGGGIGDAKGGRALTSPPPSVGMGAAAENGAAGAEAGAHLGDDESASAKAAKGHACDLLSFCVRAHTYRMKYFVLRHSIVARVLRLLQYRDKFLKLGAVRFLRSCVGMKDEFYNRYIIKNNLFAPVFALLKENAGRDNLINSAVVELVE 1548
            S+ + R+   A LL++DG Y++ LLDVFSD EDLED A+L ++    K +V LND +L+E LL+   + +V G  E+  +LK  A HR  L    KF +V+P+ +  +  +I  NFR +FLKD++ RP +D+A   TL++   +NN+EI+++  L    D  +RV   L+   L           Q R+  L FL+E+    + +Q++ R+A +     E   F  +  VL D  AD   +SER+   ++L + +  +     R H+L+ G HPP P   +                          S  G  L     +VV+  LDT+ ME  SERD FL  FYD Y+ WLV+P      + S  P                 + D     ++ + P  + M                            +G+ CDLLS CVR HTYRMKYFVL + IV R+L L    DKFLKL A+RF+RS +G+KD+FYNRY++KN L AP+F LLK  A +D L+ SA+V++ +
Sbjct:  171 SATNNREQYAAALLSEDGVYVKTLLDVFSDCEDLEDTANLTIIANIAKSLVLLNDMSLMEYLLTTELYSKVVGCLEYSTDLKHKADHRKSLETAAKFQEVVPMNEI-IREKILLNFRATFLKDIVTRPGMDEASTSTLSSFVFFNNSEILSS--LHTNCDLLKRVVEELKSQALTNASDSKERNFQSRSGALCFLKEMCNTAKNVQITCRDALFHHLVEETDFFQAITLVLED--ADNMPLSERLMSAELLSNAVCWDGAASFRKHVLNSGGHPPIPPSDSKNQGEAGGTDKASSLLWHVVRLITSESDTGVLL--HLLDVVKTCLDTEPMEP-SERDKFLALFYDHYIKWLVDPVLPNEKDDSDRP-----------------VTDTV---SVPTSPERMTM----------------------------QGYVCDLLSSCVRTHTYRMKYFVLGNRIVGRILSLADTDDKFLKLAAIRFVRSIIGVKDDFYNRYLVKNGLLAPLFVLLKTVAHKDCLLTSAIVDMAD 643          
BLAST of mRNA_P-wetherbeei_contig6046.1.1 vs. uniprot
Match: A0A7S3ATB7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ATB7_9EUKA)

HSP 1 Score: 258 bits (659), Expect = 1.340e-73
Identity = 173/499 (34.67%), Postives = 257/499 (51.50%), Query Frame = 1
Query:   61 YLQRLLDVFSDAEDLEDEASLRLLCEAMKRVVALNDQALVEALLSDRFFLQVAGVFEHDPELKAPAF---HRDFLTNTVKFCQVMPIEDPEVVARIHQNFRISFLKDMLLRPMLDDAIVGTLNAMTCYNNAEIVAAVGLGGAGDYAERVFGVLRDPDLPRQRRASGLAFLRELFAMVRTLQLSAREAFYRAGFPEPRLFDVLVPVLRDPAADVSERMACMDILLSTLTHEPGLLRNHILHRGSHPPPXXHASXXXXXXXXXXXXXXXXXXXXXXXXXSLLGRRLGGQASEVVRMLLDTDTMETQSERDAFLGAFYDVYVNWLVEPFWTANPNPSLLPGPPARHPAAPLAKGGGGIGDAKGGRALTSPPPSVGMGAAAENGAAGAEAGAHLGDDESASAKAAKGHACDLLSFCVRAHTYRMKYFVLRHSIVARVLRLLQYRDKFLKLGAVRFLRSCVGMKDEFYNRYIIKNNLFAPVFALLKENAGRDNLINSAVVELVE 1548
            Y+ RL+ +FS  EDLE +  L  L    + +V LND  + E LL +   + V G  E+DPEL A A    HR+FL +  +F QV+PIED  V+ ++HQNF ++F+KD++L   LDD    TL+ +   NN  I++ +    A  Y   +   L DP L  +     L  L+E+ ++ + LQ+  R  FYR  F E R FD L   L  PA  +  R++C+D+LL+T+ H+P LLR HIL +                                    S  G     Q +EV+R LLD + ME + E+D FL  FY+ +V  L  P                   A  +  G G +  A           S+G  AA+++           G++  A    ++ H C+LL FCV  H+YR+KYF+LR++++ ++L+L+  RDK L L A+RF R+C+G++DEFYNRY++KN  F  V   L  N  RDNL++SA++EL E
Sbjct:  175 YIPRLVALFSTVEDLEAKEDLHHLFNIFRGLVTLNDTNVYELLLREDLLMGVIGALEYDPELSAHAHEVRHREFLRDKARFKQVVPIEDSGVLKKVHQNFYLAFIKDVVLPRSLDDNTFATLSQIAFLNNVHIISHLTNDPA--YLPNLRTKLSDPSLSAEELLDALRLLQEVCSLAKQLQVYNRAGFYRK-FVEHRFFDPLERALTHPAPQL--RLSCLDVLLATVQHDPSLLRQHILQQ---------------------RPKCGMLYGLLHVVSSAGGSGEKPQVAEVLRGLLDPEGMEGR-EQDDFLNLFYESFVAQLAAPV------------------AGKVHLGTGPMNGA-----------SIGDDAASQD---------VEGEEVDAGVLTSRQHVCELLCFCVHKHSYRIKYFILRNNVLVKILKLVSQRDKCLVLAALRFFRACIGLRDEFYNRYVVKNRCFESVMRQLIANRHRDNLLHSAILELFE 608          
BLAST of mRNA_P-wetherbeei_contig6046.1.1 vs. uniprot
Match: A9SAB8_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SAB8_PHYPA)

HSP 1 Score: 254 bits (649), Expect = 7.460e-73
Identity = 162/520 (31.15%), Postives = 274/520 (52.69%), Query Frame = 1
Query:   16 ERDAVTAQLLADDGAYLQRLLDVFSDAEDLEDEASLRLLCEAMKRVVALNDQALVEALLSDRFFLQVAGVFEHDPELKAPAFHRDFLTNTVKFCQVMPIEDPEVVARIHQNFRISFLKDMLLRPMLDDAIVGTLNAMTCYNNAEIVAAVGLGGAGDYAERVFGVLRDPDLPRQRRASGLAFLRELFAMVRTLQLSAREAFYRAGFPEPRLFDVLVPVLRDPAADVSERMACMDILLSTLTHEPGLLRNHILHRGSHPPPXXHASXXXXXXXXXXXXXXXXXXXXXXXXXSLLGRRLGG---QASEVVRMLLDTDTME-TQSERDAFLGAFYDVYVNWLVEPFWTANPNPSLLPGPPARHPAAPLAKGGGGIGDAKGGRALTSP-PPSVGMGAAAENGAAGAEAGAHLGDDESASAKAAK----GHACDLLSFCVRAHTYRMKYFVLRHSIVARVLRLLQYRDKFLKLGAVRFLRSCVGMKDEFYNRYIIKNNLFAPVFALLKENAGRDNLINSAVVELVE 1548
            ++D V A ++  D  Y+++L+++F   EDLE+   L L+ + +K +++LND  + + + SD +     G  E+DP+L +   HR +L   V F + +PI DP ++++IHQ +RI ++KD++L  +LDD    T+N++  +NN  +V+A+    A  +   +F  LR P++P + R   + F++E   + + LQ   R   + A   E  LFD+L  VL+D   + S R++  DIL+  L ++P LLRN ++ + +H                                  +L    GG   Q  E++RMLLD++TM+  Q E+  FL  FY+ Y++ +VE                                       LTS  PP VG+G ++++          + D ++   +       G+ CDLL FCV+ H +R+KY+V+R  +V ++LRL + ++K+L + AVRF+R+C+ +K+EFY RYI+KNN F P+ +    N  R NL+NSAV+EL+E
Sbjct:  145 DKDRV-ASMVVHDKNYIRKLVEIFRTCEDLENVEGLHLMFKIVKGIISLNDGHIFDIIFSDDYIXXXVGALEYDPDLISRQNHRAYLKEQVVFKEAVPIYDPTILSKIHQTYRIGYIKDVILPRVLDDQTFATMNSIMLFNNVSVVSALQSDSA--FLSGLFSRLRSPEIPEKSRRDLVFFVQEFCNLSKQLQPGVRSQLFSALAKEG-LFDILKDVLKD--VEESVRLSGCDILIVILNNDPALLRNFLVQQTNH-------------------------TLFSELVSGMLTPSEGGLQAQLLEIMRMLLDSETMDGPQVEKSPFLEVFYEKYMDQMVE--------------------------------------VLTSGCPPEVGVGESSKD---------LVNDTQNQVERPVSPEILGNICDLLCFCVQHHRFRIKYYVMRKHVVEKILRLTRRKEKYLVVAAVRFIRTCISLKEEFYYRYIVKNNCFEPIISAFVANGNRYNLLNSAVLELIE 586          
BLAST of mRNA_P-wetherbeei_contig6046.1.1 vs. uniprot
Match: A0A7S3YI92_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YI92_HETAK)

HSP 1 Score: 244 bits (623), Expect = 5.250e-72
Identity = 128/262 (48.85%), Postives = 174/262 (66.41%), Query Frame = 1
Query:    4 SSISERDAVTAQLLADDGAYLQRLLDVFSDAEDLEDEASLRLLCEAMKRVVALNDQALVEALLSDRFFLQVAGVFEHDPELKAPAFHRDFLTNTVKFCQVMPIEDPEVVARIHQNFRISFLKDMLLRPMLDDAIVGTLNAMTCYNNAEIVAAVGLGGAGDYAERVFGVLRDPDLPRQRRASGLAFLRELFAMVRTLQLSAREAFYRAGFPEPRLFDVLVPVLRDPAADVSERMACMDILLSTLTHEPGLLRNHILHRGSHPP 789
            S   +++     LLA DG YL +LL +F D EDL+D  +L +L    K + +LND  L+E +LSD+FF++VAGVFE+DPELK    HR FL   V+F QV+PIEDPE+ A+I QNFRISFL+D+LLRPM+DDA   TL+++  +NN+EI+ A  L    DY +R++ +       RQ RA  LAF RE+  M +TLQ S R+ FYR    E   FDV V VL D  A +  R+ CM++L+++L H+P LLRN+IL +G HPP
Sbjct:  140 SQQQQKEVYVNLLLAKDGEYLNKLLQIFDDCEDLDDLENLHVLVNIFKAIFSLNDPTLLEVILSDQFFVRVAGVFEYDPELKHKGDHRTFLQEKVQFKQVLPIEDPELGAKIRQNFRISFLRDVLLRPMMDDAYASTLSSLAFFNNSEILQA--LHQDSDYLKRLYALFLAKGTSRQTRADILAFTREMVGMSKTLQPSVRDQFYRYLQSECLFFDVFVTVLADEEATIPARLCCMEVLVASLFHDPSLLRNYILQKGGHPP 399          
BLAST of mRNA_P-wetherbeei_contig6046.1.1 vs. uniprot
Match: A0A7I4ECA3_PHYPA (SMK-1 domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4ECA3_PHYPA)

HSP 1 Score: 252 bits (644), Expect = 1.340e-71
Identity = 159/514 (30.93%), Postives = 267/514 (51.95%), Query Frame = 1
Query:   16 ERDAVTAQLLADDGAYLQRLLDVFSDAEDLEDEASLRLLCEAMKRVVALNDQALVEALLSDRFFLQVAGVFEHDPELKAPAFHRDFLTNTVKFCQVMPIEDPEVVARIHQNFRISFLKDMLLRPMLDDAIVGTLNAMTCYNNAEIVAAVGLGGAGDYAERVFGVLRDPDLPRQRRASGLAFLRELFAMVRTLQLSAREAFYRAGFPEPRLFDVLVPVLRDPAADVSERMACMDILLSTLTHEPGLLRNHILHRGSHPPPXXHASXXXXXXXXXXXXXXXXXXXXXXXXXSLLGRRLGGQAS--EVVRMLLDTDTMETQS-ERDAFLGAFYDVYVNWLVEPFWTANPNPSLLPGPPARHPAAPLAKGGGGIGDAKGGRALTSPPPSVGMGAAAENGAAGAEAGAHLGDDESASAKAAKGHACDLLSFCVRAHTYRMKYFVLRHSIVARVLRLLQYRDKFLKLGAVRFLRSCVGMKDEFYNRYIIKNNLFAPVFALLKENAGRDNLINSAVVELVE 1548
            +RD V + ++ D   Y+ +LL +F   EDLE+ A L+L+ + +K +++LND  + + + SD + +   G  E+D ++     HR FL     F + +PI DP ++++IHQ +RI ++KD++L  +LDD    +LN++  +NN  +V A+    A  +   +F  LR  +    RR   + F++E   + + LQ   R   + A   E  L +++  +L D  AD + R++  DIL++ L H+P LLR+ ++H+ SH                                  L+    G QA   EV+RMLLD++T++T + E+  FL  FY++Y++ +V+      P P L    PA  P+    KG             T  P  +                               G+ C+L+ FCV+ H +R+KY+V+R+ +V +VLRL++ ++K+L + AVRFLR+C+ +KDEFY RYI+K+NLF P+      N  R NL+NSA++EL++
Sbjct:  181 DRDRVASMIVRDQN-YIPKLLQLFRTCEDLENLAGLQLIFKIVKGIISLNDGHIFDIIFSDEYIMXXVGALEYDSDVTKCHCHRAFLKEQAVFKEAVPIRDPVILSKIHQTYRIGYIKDVILFRVLDDPTFASLNSIILFNNVSVVTALQSDSA--FLSELFSRLRSLETSEGRRRDLVNFVQEFCNLSKHLQPLVRNQLFGALVKEG-LLEIVKDILAD--ADEAVRLSGCDILIAVLNHDPALLRSFLVHQSSH------------------------TLFNELVQGMLIPSESGVQAQLLEVMRMLLDSETIDTPAVEKSTFLETFYEIYMDQMVQLLTDGCP-PELGSVEPANDPSVDAGKG----------MKRTVAPEIL-------------------------------GNICELMCFCVQHHRFRIKYYVMRNHVVEKVLRLIRRKEKYLVVAAVRFLRTCISLKDEFYFRYIVKHNLFEPIIEAFVANGNRYNLLNSAILELID 622          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6046.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI53_ECTSI7.530e-14950.98SMK-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KKJ6_9PHAE1.730e-9641.04SMK-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A061R721_9CHLO3.250e-7734.64Protein phosphatase 4 regulatory subunit 3 n=2 Tax... [more]
A0A7S0HVM9_9EUKA1.130e-7636.45Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S0JCV2_9EUKA3.340e-7636.87Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S2D4C1_9STRA3.570e-7634.59Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3ATB7_9EUKA1.340e-7334.67Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A9SAB8_PHYPA7.460e-7331.15Predicted protein (Fragment) n=1 Tax=Physcomitrium... [more]
A0A7S3YI92_HETAK5.250e-7248.85Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7I4ECA3_PHYPA1.340e-7130.93SMK-1 domain-containing protein n=1 Tax=Physcomitr... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6046contigP-wetherbeei_contig6046:37..3524 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FI53
Preferred nameSMEK2
PFAMsSMK-1
Model size1548
Max annot lvl2759|Eukaryota
KEGG koko:K17491
KEGG Pathwayko04212,ko04922,map04212,map04922
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000228,GO:0000775,GO:0000785,GO:0000790,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0005938,GO:0006109,GO:0006111,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006464,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006935,GO:0006950,GO:0006952,GO:0006974,GO:0007049,GO:0007063,GO:0007154,GO:0007165,GO:0007275,GO:0007346,GO:0007399,GO:0007405,GO:0008047,GO:0008104,GO:0008150,GO:0008152,GO:0008283,GO:0008287,GO:0008356,GO:0009314,GO:0009411,GO:0009416,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010165,GO:0010212,GO:0010564,GO:0010604,GO:0010639,GO:0010646,GO:0010648,GO:0010675,GO:0010676,GO:0010906,GO:0010907,GO:0010921,GO:0010948,GO:0015630,GO:0016311,GO:0016604,GO:0016607,GO:0017145,GO:0019208,GO:0019211,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019888,GO:0022008,GO:0022402,GO:0022414,GO:0023051,GO:0023052,GO:0023057,GO:0030154,GO:0030234,GO:0030289,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031974,GO:0031981,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033313,GO:0033554,GO:0034641,GO:0035303,GO:0035304,GO:0035556,GO:0036211,GO:0036445,GO:0040011,GO:0040020,GO:0042221,GO:0042330,GO:0042742,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043255,GO:0043327,GO:0043412,GO:0043666,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045165,GO:0045175,GO:0045722,GO:0045739,GO:0045786,GO:0045787,GO:0045835,GO:0045875,GO:0045913,GO:0045930,GO:0045931,GO:0045935,GO:0046483,GO:0048103,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051246,GO:0051301,GO:0051321,GO:0051336,GO:0051445,GO:0051447,GO:0051598,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0055057,GO:0055059,GO:0060255,GO:0061351,GO:0062012,GO:0062013,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071704,GO:0071944,GO:0072089,GO:0072395,GO:0072411,GO:0072462,GO:0072542,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0098542,GO:0098687,GO:0098722,GO:0098772,GO:0099568,GO:1901360,GO:1901564,GO:1901976,GO:1901977,GO:1902494,GO:1902659,GO:1902660,GO:1903046,GO:1903293,GO:1904289,GO:1904290,GO:2000001,GO:2000002,GO:2000241,GO:2000242,GO:2000779,GO:2000781,GO:2001020,GO:2001021,GO:2001022,GO:2001032,GO:2001034,GO:2001251
Exons6
Evalue1.23e-149
EggNOG OGsKOG2175@1|root,KOG2175@2759|Eukaryota
Ec32 ortholog descriptionDomain of unknown function DUF625
Ec32 orthologEc-10_003590.1
Descriptionsignal transduction involved in meiotic cell cycle checkpoint
Cds size1548
COG categoryS
BRITEko00000,ko00001,ko01009,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6046.1.1prot_P-wetherbeei_contig6046.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6046 37..3524 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186885.230611-CDS-P-wetherbeei_contig6046:36..3361683186885.230611-CDS-P-wetherbeei_contig6046:36..336Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6046 37..336 +
1683186885.2513604-CDS-P-wetherbeei_contig6046:842..11621683186885.2513604-CDS-P-wetherbeei_contig6046:842..1162Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6046 843..1162 +
1683186885.2696755-CDS-P-wetherbeei_contig6046:1399..16841683186885.2696755-CDS-P-wetherbeei_contig6046:1399..1684Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6046 1400..1684 +
1683186885.2788463-CDS-P-wetherbeei_contig6046:2343..28031683186885.2788463-CDS-P-wetherbeei_contig6046:2343..2803Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6046 2344..2803 +
1683186885.2867749-CDS-P-wetherbeei_contig6046:2995..30751683186885.2867749-CDS-P-wetherbeei_contig6046:2995..3075Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6046 2996..3075 +
1683186885.294649-CDS-P-wetherbeei_contig6046:3421..35241683186885.294649-CDS-P-wetherbeei_contig6046:3421..3524Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6046 3422..3524 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6046.1.1

>prot_P-wetherbeei_contig6046.1.1 ID=prot_P-wetherbeei_contig6046.1.1|Name=mRNA_P-wetherbeei_contig6046.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=516bp
LSSISERDAVTAQLLADDGAYLQRLLDVFSDAEDLEDEASLRLLCEAMKR
VVALNDQALVEALLSDRFFLQVAGVFEHDPELKAPAFHRDFLTNTVKFCQ
VMPIEDPEVVARIHQNFRISFLKDMLLRPMLDDAIVGTLNAMTCYNNAEI
VAAVGLGGAGDYAERVFGVLRDPDLPRQRRASGLAFLRELFAMVRTLQLS
AREAFYRAGFPEPRLFDVLVPVLRDPAADVSERMACMDILLSTLTHEPGL
LRNHILHRGSHPPPPPHASGAGGAGGTGGTDSGSGSNGGGGGSGSLLGRR
LGGQASEVVRMLLDTDTMETQSERDAFLGAFYDVYVNWLVEPFWTANPNP
SLLPGPPARHPAAPLAKGGGGIGDAKGGRALTSPPPSVGMGAAAENGAAG
AEAGAHLGDDESASAKAAKGHACDLLSFCVRAHTYRMKYFVLRHSIVARV
LRLLQYRDKFLKLGAVRFLRSCVGMKDEFYNRYIIKNNLFAPVFALLKEN
AGRDNLINSAVVELVE
back to top

mRNA from alignment at P-wetherbeei_contig6046:37..3524+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6046.1.1 ID=mRNA_P-wetherbeei_contig6046.1.1|Name=mRNA_P-wetherbeei_contig6046.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3488bp|location=Sequence derived from alignment at P-wetherbeei_contig6046:37..3524+ (Phaeothamnion wetherbeei SAG_119_79)
CTGTCATCGATCTCGGAGCGCGACGCGGTGACGGCGCAGCTCCTGGCTGA TGACGGCGCCTACCTGCAGCGGCTGCTCGACGTCTTTTCCGACGCGGAAG ATTTGGAGGACGAGGCCAGCCTGCGGCTGCTCTGCGAGGCGATGAAACGG GTGGTGGCGCTGAACGACCAGGCACTGGTGGAGGCGCTGCTGTCGGACCG CTTCTTCCTACAGGTGGCGGGCGTGTTTGAGCACGACCCCGAGCTCAAGG CGCCGGCCTTTCACCGCGACTTCCTCACCAATACCGTCAAGTTCTGCCAG GTGAGAGAAAGAGGTGGCGGTGTGAGCTGAGAGGGCGCAGAGGTGGATAA ATGGCGGCAGGTGAGGGTTGGAAAGGGAGAAGTACGGCTATAACTGCCAA AATGCTGTTTTTTAAGTGTTTAAACGCGCTCATGACTGCTGCTGGGGGGA GAGAGTCCTGCAGTGGCTGGTGATACTATTTTTGCCGTCGCTGGCGATGT TACGGCTAGCTGACACTGACAGTTGAGAGTTATTTGGTTGGTTGGTTGCT GTTTTCAGTCTGTAGTTGCAGAATATCTCCCGCCGTCGAGAGTTGTGTAA GCATGTTACGGCTTCGGCTTCCATGGCTACCCATTGTTCATTACTTGTGT CTAAGCAGAACACCGACGAGCCAGTTTTCAATTGCTCCCTTTGCCTTGAT TTCTCACACCGCTCTTCTGTCTTTGCTAAGCTTTCTTCTCAATCCACTAC TCTCGTTCCATCCCATTCCGACTGATTCCGACGGAAACGACTCATGGTTC CTACAGGTGATGCCGATTGAAGACCCCGAAGTGGTGGCGCGCATCCACCA AAACTTCCGCATCTCCTTTTTGAAGGACATGCTGCTGCGCCCCATGCTCG ACGACGCCATCGTTGGCACCCTCAACGCGATGACGTGCTACAACAACGCC GAGATCGTCGCCGCCGTCGGCCTTGGTGGCGCAGGCGACTACGCAGAGCG CGTCTTCGGCGTGCTGCGGGATCCCGATCTGCCGCGGCAGCGGAGGGCGA GCGGACTGGCGTTCCTGCGGGAGCTGTTTGCGATGGTGCGGACGCTGCAG CTGTCGGCCAGGGAGGCCTTCTATCGGTGAGAGCGAAAAGCTGGCAGGCG GTCTGGTTATTCCATCGAGGCTTCTTTATTTCGCAAGTGCGTTTACGGGG AGGGGGAGTATGAGGTAGCAGAAAGCTTTGCTTTAAGCGACCCTCTCCTT GGGCTGAGTGGGCAGTGGGTCCCCGTACGACCAACATATTGAAACGGCTT TCCCTCTTATCTCGGCCTTCCCGTTGCCTGCCCTACCCGCAGGGGTCCGA TGCTGGGCTACAGCGCTGGGTTCCCGGAGCCGCGGCTCTTCGACGTGCTC GTGCCCGTGCTACGCGACCCGGCCGCCGACGTCTCGGAGCGCATGGCCTG CATGGACATTCTGCTGAGCACCCTGACGCACGAGCCGGGCCTACTCCGAA ACCACATCCTGCACCGTGGCAGCCACCCACCGCCGCCTCCGCATGCATCC GGCGCAGGCGGCGCTGGCGGCACCGGCGGCACCGACAGCGGTAGTGGTTC CAACGGCGGCGGCGGCGGCAGCGGAAGTCTGCTGGGCAGGCGGCTGGGGT TGGCATCGGCGGCAGGGATGCCGGGGGCGCTGAGCTTTGGCGGAGCGTCG TCCATCGCGGGGAGCGGCGGCATGGACCCGTCGAAAATGGCGCGGAGTGT GCGGGAGTGCAAGAGCCTCCTCTTCTGGCTGCTACGACGGCTGGCGACGG ACCCAGACCTTGGGATCCTTGTCCAGGTGAGATGGCACGCTTGCCGACCG ACTTTTCGCGTTTCTGATTGGGCTTGGGGCGACGTATTGGGTGTCTTTGG TGCGCTTCTGGAATTGGAGTTCCTTGGCGTTGCCGTCAAACACATTTCTT TGATGTTGGCTGCGGAGGTGGTGTCTGCTAGTCTCGCCATCTCCCACATC GATTACTGATTATCCTTGCGTTGAGGCGATGAAGCATGGTGCAAGGCAGC CATTGTCTGACGCCTTTTTCTCCTCATGCAGCGCTTCATGTGCCAGTCTT TCCATCTTATGAATGGTCCCTTGCACTGCTGTCTTCACTCCGTTTCCTCC TTTTGGTGCCAGCGTTACCTGTAGAATTCCTTCCTTAATCTTACTCTTGC TGTGACACCCTTTTTCTGTCTTTCTTGCTGCCTTCCTTTTTTGCTTCTTG GCTTCTTGATATATCAACTGGGTTGACTGCGTCCGGTCTGGACCGGCTTA CTGGGAGGGGACAGGCATCGGAGGTGGTGCGGATGCTACTGGACACGGAC ACGATGGAGACGCAATCGGAGCGCGACGCCTTCCTTGGTGCCTTTTACGA CGTCTACGTCAACTGGCTCGTTGAGCCCTTCTGGACCGCCAATCCCAACC CGTCCCTCCTGCCCGGCCCGCCCGCCCGCCACCCGGCAGCGCCGCTGGCG AAGGGAGGAGGCGGAATCGGCGACGCCAAAGGCGGCAGGGCATTGACGTC GCCACCGCCAAGCGTCGGGATGGGAGCGGCGGCGGAGAACGGGGCGGCGG GGGCGGAGGCGGGGGCGCACCTTGGGGATGACGAGTCGGCGTCAGCAAAG GCGGCAAAGGGGCACGCGTGCGACCTGCTGTCGTTCTGCGTGCGCGCGCA CACGTATCGGATGAAGTACTTCGTGCTGCGCCACAGCATCGTCGCGAGGG TGCTGCGGCTCCTGCAGGTGCGTCGGTTTTTTTTTACCGGTTGTTCGAAA CGGAAGGTGGTTCAGCGCCAAAGAATGCCTCCTGCTCGGTGCTCTGGACG GTCGCTCTCAGCGATATTGCCTTGTCTCCTCTTGCTTAGATGCCACTGTA TTTCTTTTATTTCGGCCAACTCGGCCAACTCTGCGATTCCGTTTTTGCAA TGTCCGCAGTACCGGGACAAGTTCCTGAAGCTGGGGGCAGTTCGCTTCCT TCGGTCGTGCGTCGGCATGAAAGACGAGTTCTACAACCGGTATGTCCTTT CGTCTTTTCTTCGGTTTCTGATAAGTTTCTGCGGTCGGGGTTCCGGTACA GTTGCAAATATTTTCCTTGATGGTTTGTTATGGGGGGTTGGAAAAAGAGT TAGAATCAGAAAGCGCTTCCCTGAGCTCTGTCCTCTCGTTCAGTACGTCC TCCCATGTGTCATTCCCTGTCTGCCCCTCGAAAACGGTCAACGGCGTTCG TGATGGCGGTGCGATGGCGACTGGGTGTATGGCGACGGCGTGCACGGCGG CCGGCCTGCGCAATTGCGCTGTGGCGGCCTCGGTGTCGTTGGGCGGTGGT CGCTTTACCTGGCGGCCAACGGGCGGCAACCGCAGGTACATCATCAAGAA CAATCTCTTCGCGCCCGTCTTCGCGCTGCTGAAGGAGAACGCCGGGCGGG ACAACCTCATCAACTCAGCCGTGGTCGAGCTCGTCGAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6046:37..3524+

>mRNA_P-wetherbeei_contig6046.1.1 ID=mRNA_P-wetherbeei_contig6046.1.1|Name=mRNA_P-wetherbeei_contig6046.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1548bp|location=Sequence derived from alignment at P-wetherbeei_contig6046:37..3524+ (Phaeothamnion wetherbeei SAG_119_79)
CTGTCATCGATCTCGGAGCGCGACGCGGTGACGGCGCAGCTCCTGGCTGA
TGACGGCGCCTACCTGCAGCGGCTGCTCGACGTCTTTTCCGACGCGGAAG
ATTTGGAGGACGAGGCCAGCCTGCGGCTGCTCTGCGAGGCGATGAAACGG
GTGGTGGCGCTGAACGACCAGGCACTGGTGGAGGCGCTGCTGTCGGACCG
CTTCTTCCTACAGGTGGCGGGCGTGTTTGAGCACGACCCCGAGCTCAAGG
CGCCGGCCTTTCACCGCGACTTCCTCACCAATACCGTCAAGTTCTGCCAG
GTGATGCCGATTGAAGACCCCGAAGTGGTGGCGCGCATCCACCAAAACTT
CCGCATCTCCTTTTTGAAGGACATGCTGCTGCGCCCCATGCTCGACGACG
CCATCGTTGGCACCCTCAACGCGATGACGTGCTACAACAACGCCGAGATC
GTCGCCGCCGTCGGCCTTGGTGGCGCAGGCGACTACGCAGAGCGCGTCTT
CGGCGTGCTGCGGGATCCCGATCTGCCGCGGCAGCGGAGGGCGAGCGGAC
TGGCGTTCCTGCGGGAGCTGTTTGCGATGGTGCGGACGCTGCAGCTGTCG
GCCAGGGAGGCCTTCTATCGCGCTGGGTTCCCGGAGCCGCGGCTCTTCGA
CGTGCTCGTGCCCGTGCTACGCGACCCGGCCGCCGACGTCTCGGAGCGCA
TGGCCTGCATGGACATTCTGCTGAGCACCCTGACGCACGAGCCGGGCCTA
CTCCGAAACCACATCCTGCACCGTGGCAGCCACCCACCGCCGCCTCCGCA
TGCATCCGGCGCAGGCGGCGCTGGCGGCACCGGCGGCACCGACAGCGGTA
GTGGTTCCAACGGCGGCGGCGGCGGCAGCGGAAGTCTGCTGGGCAGGCGG
CTGGGGGGACAGGCATCGGAGGTGGTGCGGATGCTACTGGACACGGACAC
GATGGAGACGCAATCGGAGCGCGACGCCTTCCTTGGTGCCTTTTACGACG
TCTACGTCAACTGGCTCGTTGAGCCCTTCTGGACCGCCAATCCCAACCCG
TCCCTCCTGCCCGGCCCGCCCGCCCGCCACCCGGCAGCGCCGCTGGCGAA
GGGAGGAGGCGGAATCGGCGACGCCAAAGGCGGCAGGGCATTGACGTCGC
CACCGCCAAGCGTCGGGATGGGAGCGGCGGCGGAGAACGGGGCGGCGGGG
GCGGAGGCGGGGGCGCACCTTGGGGATGACGAGTCGGCGTCAGCAAAGGC
GGCAAAGGGGCACGCGTGCGACCTGCTGTCGTTCTGCGTGCGCGCGCACA
CGTATCGGATGAAGTACTTCGTGCTGCGCCACAGCATCGTCGCGAGGGTG
CTGCGGCTCCTGCAGTACCGGGACAAGTTCCTGAAGCTGGGGGCAGTTCG
CTTCCTTCGGTCGTGCGTCGGCATGAAAGACGAGTTCTACAACCGGTACA
TCATCAAGAACAATCTCTTCGCGCCCGTCTTCGCGCTGCTGAAGGAGAAC
GCCGGGCGGGACAACCTCATCAACTCAGCCGTGGTCGAGCTCGTCGAG
back to top