mRNA_P-wetherbeei_contig6040.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6040.1.1 vs. uniprot
Match: A0A842HBI2_9BACT (Uncharacterized protein n=1 Tax=Ruficoccus amylovorans TaxID=1804625 RepID=A0A842HBI2_9BACT) HSP 1 Score: 150 bits (380), Expect = 1.230e-40 Identity = 90/226 (39.82%), Postives = 115/226 (50.88%), Query Frame = 1
Query: 1 WRFDKVPYWNALLFFAGSVCFCFASAAVYAKPVAESAKLFAQFAGWPG-------FTGSVFFTIGSFLQVLEVANAPAAPEQSYGDAP-KPRWRWLTWQPQRLDF-------IGALIFNVNT-LTGSGAFSWVTRGLYWAVWFPDVMASCCFVAAGYLSLVEYVHAWWAWRPGDPIWWLNMSNFAGGVGFLLNALFGIAWLDPSLAYERGTVFLWLLLGSICFQVS 630
WRFD + +W L+F GS+CF + P+A S AQ+ GW F GSVFFTIGS + VLE NAP+ P +S+ P + RWRW W+ R+DF GA IFN+N + SW LY VW P +ASCCFV A Y+ LVE H WAW D WW+N + G GFL ++L G P + F L++GS F S
Sbjct: 104 WRFDHLSWWIGLIFIIGSICFVLGTV-----PMAFST--IAQWMGWSAWALDFTCFMGSVFFTIGSSMLVLEALNAPSDPSRSHAGKPARRRWRWFGWEWGRIDFRAAVVQLTGACIFNINCGMALVAGLSWWQSDLY--VWTPSTLASCCFVMASYIGLVEVSHRRWAWLVWDMAWWINFFSLLGSFGFLCSSLVGYFGQGPLEFPQWWGNFFALMIGSWFFLFS 320
BLAST of mRNA_P-wetherbeei_contig6040.1.1 vs. uniprot
Match: A0A8G0XVC5_9BACT (Uncharacterized protein n=1 Tax=Ruficoccus sp. ZRK36 TaxID=2866311 RepID=A0A8G0XVC5_9BACT) HSP 1 Score: 143 bits (361), Expect = 5.000e-38 Identity = 79/220 (35.91%), Postives = 115/220 (52.27%), Query Frame = 1
Query: 1 WRFDKVPYWNALLFFAGSVCFCFASAAVYAKPVAESAKLFAQFAGWPGFTGSVFFTIGSFLQVLEVANAPAAPEQSYG-DAPKPRWRWLTWQPQRLDF-------IGALIFNVNT-LTGSGAFSWVTRGLYWAVWFPDVMASCCFVAAGYLSLVEYVHAWWAWRPGDPIWWLNMSNFAGGVGFLLNALFGIAWLDP-SLAYERGTVFLWLLLGSICFQVS 630
W +++ +W L+F GS+CF + + + VA+ + F GSVFFT+GS++ VLE NA + P + P+PRWRWL W+ R+DF GA++FN+N + W L+ VW P +ASCCFV A YL L+E H WAW+ D WW+N+ + G +GFL ++L G P G +F L++GS F S
Sbjct: 89 WSLNRLSWWIGLIFILGSICFVLGTVPLAYEAVADWMGWSQWALDFTCFLGSVFFTVGSYMLVLEALNASSDPSSKHAAKPPRPRWRWLGWEWGRIDFRIASVQLTGAIVFNINCGMALVEGLDWWQSDLF--VWTPSTLASCCFVTASYLGLLEVTHRRWAWQVWDMSWWINLFSLLGSLGFLCSSLVGYFGQGPVQFPQWWGNMFA-LMMGSWFFLFS 305
BLAST of mRNA_P-wetherbeei_contig6040.1.1 vs. uniprot
Match: UPI0016771391 (hypothetical protein n=1 Tax=Cerasicoccus arenae TaxID=424488 RepID=UPI0016771391) HSP 1 Score: 122 bits (305), Expect = 1.090e-29 Identity = 73/228 (32.02%), Postives = 108/228 (47.37%), Query Frame = 1
Query: 1 WRFDKVPYWNALLFFAGSVCFCFASAAVYAKPVAESAKLFAQFAGWPGFTGSVFFTIGSFLQVLEVANAPAAP-------------EQSYGDAPKPRWRWLTWQPQRLDFI-------GALIFNVNTLTGS-GAFSWVTRGLYWAVWFPDVMASCCFVAAGYLSLVEYVHAWWAWRPGDPIWWLNMSNFAGGVGFLLNALFGIAWLDPSLAYERGTVFLWLLLGSICF 621
WR + +W L+F GS+CF + V V L F GS++FT+GS+L +LE NA E P R RW W+P+RLDF+ GA+IFN+N G +WV + +W P +ASCCF+ A YL ++E H+ W+W D WW+N + G +GFL+++L G P + + + L++GS F
Sbjct: 95 WRLCSLSWWLGLIFIIGSICFVLGTVPVAFPEVLSVFGLPTYNFDLVCFIGSLWFTLGSYLLLLEALNADLDATLQLKAHEAARYLEGQVEKCPDKRIRWFGWEPKRLDFLIAAVQLTGAIIFNINCGMGLVDGLNWVWADIL--IWTPSTVASCCFLTASYLGVMEVAHSRWSWLWWDISWWINFFSLLGSLGFLISSLVGYFGEGPVVLPQWFGNYFALMMGSWFF 320
BLAST of mRNA_P-wetherbeei_contig6040.1.1 vs. uniprot
Match: A0A8J3DD52_9BACT (Uncharacterized protein n=1 Tax=Cerasicoccus arenae TaxID=424488 RepID=A0A8J3DD52_9BACT) HSP 1 Score: 116 bits (291), Expect = 1.520e-28 Identity = 71/223 (31.84%), Postives = 106/223 (47.53%), Query Frame = 1
Query: 16 VPYWNALLFFAGSVCFCFASAAVYAKPVAESAKLFAQFAGWPGFTGSVFFTIGSFLQVLEVANAPAAP-------------EQSYGDAPKPRWRWLTWQPQRLDFI-------GALIFNVNTLTGS-GAFSWVTRGLYWAVWFPDVMASCCFVAAGYLSLVEYVHAWWAWRPGDPIWWLNMSNFAGGVGFLLNALFGIAWLDPSLAYERGTVFLWLLLGSICF 621
+ +W L+F GS+CF + V V L F GS++FT+GS+L +LE NA E P R RW W+P+RLDF+ GA+IFN+N G +WV + +W P +ASCCF+ A YL ++E H+ W+W D WW+N + G +GFL+++L G P + + + L++GS F
Sbjct: 1 MSWWLGLIFIIGSICFVLGTVPVAFPEVLSVFGLPTYNFDLVCFIGSLWFTLGSYLLLLEALNADLDATLQLKAHEAARYLEGQVEKCPDKRIRWFGWEPKRLDFLIAAVQLTGAIIFNINCGMGLVDGLNWVWADIL--IWTPSTVASCCFLTASYLGVMEVAHSRWSWLWWDISWWINFFSLLGSLGFLISSLVGYFGEGPVVLPQWFGNYFALMMGSWFF 221
BLAST of mRNA_P-wetherbeei_contig6040.1.1 vs. uniprot
Match: A0A2E7KLU3_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KLU3_9PLAN) HSP 1 Score: 117 bits (293), Expect = 3.210e-28 Identity = 69/215 (32.09%), Postives = 109/215 (50.70%), Query Frame = 1
Query: 1 WRFDKVPYWNALLFFAGSVCFCFASAAVYAKPVAESAKLFAQFAGWPGFTGSVFFTIGSFLQVLEVANAPAAPEQSYGDAPKPRWRWLTWQPQR-------LDFIGALIFNVNTLTGSG-AFSWVTRGLYWAVWFPDVMASCCFVAAGYLSLVEYVHAWWAWRPGDPIWWLNMSNFAGGVGFLLNALFGIAWLDPSLAYERGTVFLWLLLGSICF 621
W ++ +W LF GS+ F AS + A +A + L + F GS+ FT ++LQ+ + ANA P++ D R R W+P++ L FIGA++FN+NT +W+ L VW P+ S F+A+GYL+ +E H +W WR + WW+ + N G VGF+++A F I+ S+ + + L G+ICF
Sbjct: 67 WMPGELNWWIGSLFAFGSLLFATASVLLLAPELANALALSSTQVNAIYFAGSLPFTTAAYLQLYQAANAGPLPDEP--DRSGKRHRLFGWKPRKAGWLSCALQFIGAVLFNLNTFDALWPGLTWIQTDLL--VWVPNFAGSVLFLASGYLAYIEICHRYWGWRSENLSWWIVVINLLGCVGFMVSACFAISLPGQSIEWMETVAVAFTLQGAICF 277
BLAST of mRNA_P-wetherbeei_contig6040.1.1 vs. uniprot
Match: A0A517QHX3_9PLAN (Uncharacterized protein n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QHX3_9PLAN) HSP 1 Score: 116 bits (291), Expect = 5.050e-28 Identity = 70/219 (31.96%), Postives = 111/219 (50.68%), Query Frame = 1
Query: 1 WRFDKVPYWNALLFFAGSVCFCFASAAVYAKPVAESAKLFAQFAGWPGFTGSVFFTIGSFLQVLEVANAPAAPEQSYGDAPKPRWRWLTWQPQR-------LDFIGALIFNVNTLTG-SGAFSWVTRGLYWAVWFPDVMASCCFVAAGYLSLVEYVHAWWAWRPGDPIWWLNMSNFAGGVGFLLNALFGIAWLD-PSLAYERGTVFLWLLLGSICFQVS 630
W + +W ++F G+ CF AS + +A + F GS+ F+I ++LQ+ + ANA P + R R + W+P L FIG L+FN+NT S + +WV L+ VW P+V+ S F+A+GYL+ +E H+ W+W + WW+ N G +GF+++ALF + + P+ +VF LLG+ICF V
Sbjct: 63 WLPSHLNWWIGVIFAVGASCFGMASTLILFPSLAAEIAISEAGINRIFFAGSIPFSIAAWLQLYQAANAAPLPTSEDTTKTEHRIRLIGWRPDEIGWVSCALQFIGTLLFNINTFNAMSSSLTWVQIDLW--VWIPNVIGSILFLASGYLAFIEAGHSLWSWPHANLSWWIVFINLLGCIGFMISALFAPLFSETPNPLATTVSVFC-TLLGAICFFVG 278
BLAST of mRNA_P-wetherbeei_contig6040.1.1 vs. uniprot
Match: UPI001CA6B9CC (hypothetical protein n=1 Tax=Streptomyces sp. PTM05 TaxID=2873249 RepID=UPI001CA6B9CC) HSP 1 Score: 91.7 bits (226), Expect = 1.130e-18 Identity = 57/172 (33.14%), Postives = 83/172 (48.26%), Query Frame = 1
Query: 145 FTGSVFFTIGSFLQVLEVANAPAAPEQSYGDAPKPRWRWLTWQPQRLD-------FIGALIFNVNTLTGSGAFSWVTRGLYWAVWFPDVMASCCFVAAGYLSLVEYVHAWWAWRPGDPIWWLNMSNFAGGVGFLLNALFGIAWLDPSLAYE-RGTVFLW-LLLGSICFQVSG 633
F G +FF G ++ +L+V NAP G PRWRW +++PQRLD F G L+F V+ L S R + +W PDV+ F+ +G+LSLVE H P D WW+ N G F+++AL A+ P+ + W G++CF + G
Sbjct: 104 FAGGLFFNTGGYVSLLQVVNAPRHVPGGAGALTTPRWRWWSFEPQRLDWLSVFVLFAGTLVFAVDLLD-SFLRGLTVRQVNRLIWAPDVVGCVLFLLSGHLSLVEICHGRPRLLPRDLGWWIVAVNQLGSFLFMISAL--AAYTRPATGSPVNADIADWGTFTGALCFSLGG 272
BLAST of mRNA_P-wetherbeei_contig6040.1.1 vs. uniprot
Match: A0A0L8KZM4_9ACTN (NADH-ubiquinone oxidoreductase n=1 Tax=Streptomyces resistomycificus TaxID=67356 RepID=A0A0L8KZM4_9ACTN) HSP 1 Score: 91.3 bits (225), Expect = 1.580e-18 Identity = 57/177 (32.20%), Postives = 87/177 (49.15%), Query Frame = 1
Query: 145 FTGSVFFTIGSFLQVLEVANAPAAPEQSYGDAPKPRWRWLTWQPQRLD-------FIGALIFNVNTLTGSGAFSWVTRGLYWA-----VWFPDVMASCCFVAAGYLSLVEYVHAWWAWRPGDPIWWLNMSNFAGGVGFLLNALFGIAWLDPSL-AYERGTVFLW-LLLGSICFQVSG 633
F G +FFT+G ++ +L+V NAP G RWRW +++P R+D F G L+F V+ L RGL +W PDV+ F+ +G+L+ VE H RP D WW+ N G + F+++AL A+ PS + + W L G++CF ++G
Sbjct: 104 FAGGLFFTVGGYVSLLQVVNAPRHVAGGEGRLVTRRWRWWSYEPTRVDWLSTFVLFAGTLVFTVDLLDS------FLRGLNVQQVNRLIWAPDVVGCALFLLSGHLAFVEICHGRLCVRPHDLGWWIVAVNQLGSLLFMVSAL--AAYTRPSSGSLVNADIANWGTLAGALCFALAG 272
BLAST of mRNA_P-wetherbeei_contig6040.1.1 vs. uniprot
Match: UPI001AEA9C92 (hypothetical protein n=1 Tax=Pseudonocardia parietis TaxID=570936 RepID=UPI001AEA9C92) HSP 1 Score: 91.3 bits (225), Expect = 2.460e-18 Identity = 61/221 (27.60%), Postives = 97/221 (43.89%), Query Frame = 1
Query: 1 WRFDKVPYWNALLFFAGSVCFCFASAAVYAKPVAESAKLFAQFAGWPGFTGSVFFTIGSFLQVLEVANAPAAPEQSYGDAPKPRWRWLTWQPQRLDF-------IGALIFNVNTLTGSGAFSWVTRGLYWAVWFPDVMASCCFVAAGYLSLVEYVHAWWAWRPGDPIWWLNMSNFAGGVGFLLNALFGIAWLD--PSLAYERGTVFLWL--LLGSICFQVS 630
W D++ +W A+LF AGS+ F +AA + + A G+V +T+ + Q+LE NA + G P WRW W P RL F +GA++FN T+ + + G +W ++ S F+ A L + E H P + WW+ + G VGF++ +L G D P+ E G + + + LLG + F
Sbjct: 71 WAPDRLAWWVAILFVAGSLLFVLGAAASLVPSLFGGEHAMSLVAEGCYTLGAVLYTVSVYGQLLEYLNADDRITTAEGSRPPEHWRWWAWDPTRLGFLVPFVFLVGAVVFNYETIAALLSTLGLVPGTV-GLWVTCLVGSVLFLIASVLQIAEVGHGRLRAEPRNISWWVAVLFVIGSVGFIVGSLPGFGTGDGFPTAEQESGALIVKIGFLLGGVAFTAG 290
BLAST of mRNA_P-wetherbeei_contig6040.1.1 vs. uniprot
Match: A0A1H5I0Q7_9ACTN (Uncharacterized protein n=1 Tax=Streptomyces sp. 2231.1 TaxID=1855347 RepID=A0A1H5I0Q7_9ACTN) HSP 1 Score: 87.0 bits (214), Expect = 2.350e-17 Identity = 53/172 (30.81%), Postives = 83/172 (48.26%), Query Frame = 1
Query: 145 FTGSVFFTIGSFLQVLEVANAPAAPEQSYGDAPKPRWRWLTWQPQRLD-------FIGALIFNVNTLTGSGAFSWVTRGLYWAVWFPDVMASCCFVAAGYLSLVEYVHAWWAWRPGDPIWWLNMSNFAGGVGFLLNALFGIAWLDPSL-AYERGTVFLW-LLLGSICFQVSG 633
F G +FF G ++ +L+V NAP G RWRW +++P R+D F+G L+F VN L S + + +W PDV+ F+ +G+L VE H P WW+ N G V F+++AL A+ P+ + + W L G++CF ++G
Sbjct: 50 FAGGLFFNTGGYVSLLQVINAPRHDTTGAGRLATRRWRWWSYEPMRVDWLGAFVLFLGTLVFAVNLLD-SFLQGLSVQQVNRLIWVPDVIGCVLFLVSGHLGFVELCHGRPCVHPHSLGWWIVAVNQLGSVLFMVSAL--AAYTRPATGSLVNADIANWGTLTGALCFSLAG 218 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6040.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6040.1.1 >prot_P-wetherbeei_contig6040.1.1 ID=prot_P-wetherbeei_contig6040.1.1|Name=mRNA_P-wetherbeei_contig6040.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=219bp WRFDKVPYWNALLFFAGSVCFCFASAAVYAKPVAESAKLFAQFAGWPGFTback to top mRNA from alignment at P-wetherbeei_contig6040:702..2262- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6040.1.1 ID=mRNA_P-wetherbeei_contig6040.1.1|Name=mRNA_P-wetherbeei_contig6040.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1561bp|location=Sequence derived from alignment at P-wetherbeei_contig6040:702..2262- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6040:702..2262- >mRNA_P-wetherbeei_contig6040.1.1 ID=mRNA_P-wetherbeei_contig6040.1.1|Name=mRNA_P-wetherbeei_contig6040.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=657bp|location=Sequence derived from alignment at P-wetherbeei_contig6040:702..2262- (Phaeothamnion wetherbeei SAG_119_79)back to top |