mRNA_P-wetherbeei_contig6038.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6038.2.1 vs. uniprot
Match: D8LNU1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNU1_ECTSI) HSP 1 Score: 124 bits (311), Expect = 3.740e-30 Identity = 96/256 (37.50%), Postives = 125/256 (48.83%), Query Frame = 1
Query: 1 LGGLDAYLDARAWQPGDGSGRRIVSHLLTYPLTLASALH--RLKASQEGVGKYG--DSLSIVCVGARAEASLPLPLWRELLFACPWLQALNIHFIGLDC---PGVSPAAGAGNAA---GNTIRPAKAGAPSAVNGSTVTATLEGRSVHFSLTRGLLHAAAA-------VSPDV---------RAAAT----------------AADAFVLFNPGLAAPALRDGWRPTLDFLLPLRRPVVMTSHSDADXXXDAALLR 642
L L+ YL AR W + RR +SHLLTYPLTLA+ L R+K E G + L++VC+GARAE+++P WRE LFA P + L++H IG + PGV AA G AA TI P ST ++ R+ + TR ++ ++A P+ R AAT AADAFVLFNPGL P LR GW L LL +P+V++ HS D D LLR
Sbjct: 80 LESLEGYLQARRWPYREEPARRFLSHLLTYPLTLAAGLREARIKQQPEYTNSDGRRNKLAVVCLGARAESTMPPAYWREALFALPDVSRLSLHLIGPELGLPPGVVAAARPGTAACDGAGTIGPI----------STAVISVGARTADIAWTRAMVGSSAGGCVTGAEQKPEAAAGSAVGSGRGAATEPGGAGAVEAAEEAVEAADAFVLFNPGLGHPHLRQGWDGALKRLLATGKPIVVSCHSPKDLDRDTRLLR 325
BLAST of mRNA_P-wetherbeei_contig6038.2.1 vs. uniprot
Match: A0A835YLS8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS8_9STRA) HSP 1 Score: 113 bits (283), Expect = 2.420e-27 Identity = 86/228 (37.72%), Postives = 114/228 (50.00%), Query Frame = 1
Query: 1 LGGLDAYLDARAWQ---PGDGSGRRIVSHLLTYPLTLASALHRLKASQEGVGKYGDS-LSIVCVGARAEASLPLPLWRELLFACP-WLQALNIHFIG--LDCP-GVSPAAGAGNAAGNTIRPAKAGAPSAVNGSTVTATLEGRSVHFSLTRGLLHAAA---AVSPD----VRAAATAADAFVLFNPGLAAPALRDGWRPTLDFLLPLRRPVVMTSHSDADXXXDAALL 639
L +AYL +R W P D + RI+SHLLTYPLTLA+AL AS E + + L + C+GARAEA+LP LW E LF+C L + FIG L P V PA+ A +T+R GRS+ RGL H A A+ D + DA+VLF+PGL L GW+ T D ++ + PV++T+HS+ D D A L
Sbjct: 41 LSSTEAYLASRFWTNILPSDAAAMRIISHLLTYPLTLAAAL----ASVENTRSFSRAGLHVECIGARAEATLPPHLWAEALFSCGRLLDGGRLTFIGPELGVPRAVKPASSGDTAPCHTLRQG------------------GRSLELQWVRGLFHDTASGRALRHDSCNRTEGSIHTVDAYVLFSPGLGHLHLSTGWQATADLVMASQTPVILTAHSEGDARRDVAWL 246
BLAST of mRNA_P-wetherbeei_contig6038.2.1 vs. uniprot
Match: A0A7S2S4T4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4T4_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.650e-19 Identity = 74/218 (33.94%), Postives = 99/218 (45.41%), Query Frame = 1
Query: 4 GGLDAYLDARAWQP---GDGSGRRIVSHLLTYPLTLASALHRLKASQEGVGKYGDSLSIVCVGARAEASLPLPLWRELLFACPWLQALNIHFIGLDCPGVSPAAGAGNAAGNTIRPAKAGAPSAVNGSTVTATLEGRSVHF-SLTRGLLHAAAAVSPDVRAAATAADAFVLFNPGLAAPALRDGWRPTLDFLLPL--RRPVVMTSHSDADXXXDAALL 639
G LD YL R W P +GRR++SH+L+YPL+LA +H+L + G+ L ++C GAR EA LP W ELL ACP L + +HF+G P RP A P + +T T TL ++ LLH P + NPGL P+LR GW +L L R P+++TSH D D L
Sbjct: 90 GDLDGYLRYRGWPPDAVASPAGRRVLSHVLSYPLSLARGIHKLGLASGDEGR----LRVLCAGARGEAGLPPQWWMELLHACPALSHVTLHFVGPQVQEGPPRV--------LERPTSAQGPGH-HRTTPTLTLASSQTTLEAVDDALLH-----PPPTTLV-------WMSNPGLGHPSLRKGWAASLTRLAQAEPRLPLLVTSHHALDQERDLEAL 282
BLAST of mRNA_P-wetherbeei_contig6038.2.1 vs. uniprot
Match: K8YPB9_NANGC (Mrna processing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YPB9_NANGC) HSP 1 Score: 81.6 bits (200), Expect = 1.020e-14 Identity = 75/244 (30.74%), Postives = 104/244 (42.62%), Query Frame = 1
Query: 10 LDAYLDARAWQPGD------GSGRRIVSHLLTYPLTLAS---ALHRLKASQEGVGKYGDSLSIVCVGARAEASLPLPLWRELLFACPWLQALNIHFIGLDCPGVSPAAGAGNAAG-------------------------NTIRPAKAGAPSAVNGSTVTATLEGRSVHFSLTRGLLHAAAAVSPDVRAAATAADAFVLFNPGLAAPALRDGWRPTLDFLLPLRRPVVMTSHSDADXXXDAALL 639
L+ Y+ R W + G R++SHLL+YPLTLA +LH S G G+ + +GARAEA+LP W+E+L P L L H +G + PA AG + ++ R + + +P A + S+ SL A+ SP A A VLFNPGL PAL W+PTL L + P++ T+HS D D A L
Sbjct: 56 LEEYVRRRQWAGKNTETLLASPGLRVLSHLLSYPLTLAHYLPSLHGSDTSSAKAGSPGEVCHVAIIGARAEATLPDAWWQEVLCLQPGLFCL--HMVGPEV--YDPATRAGRESVRLDPQRQLWMHRRQGMYHVLAPDLVSSFRLSPSSSPPASSASSPGVAATPAPTASSLDPVAPSQASDASP------AAVSAAVLFNPGLGHPALAKAWKPTLQCLQAAKVPILWTAHSAEDRDRDVAWL 289
BLAST of mRNA_P-wetherbeei_contig6038.2.1 vs. uniprot
Match: A0A482SGE6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SGE6_9ARCH) HSP 1 Score: 79.7 bits (195), Expect = 2.610e-14 Identity = 69/217 (31.80%), Postives = 101/217 (46.54%), Query Frame = 1
Query: 10 LDAYLDAR---AWQPGDGSGRRIVSHLLTYPLTLASALHRLKASQEGVGKYGDSLSIVCVGARAEASLPLPLWRELLFACP-WLQALNIHFIGLDCPGVSPAAGAGNAAGNTIRPAKAGAP--SAVNGSTVTATLEGRSVHFSLTRGLLHAAAAVSPDVRAAATAADAFVLFNPGLAAPALRDGWRPTLDFLLPLRRPVVMTSHSDADXXXDAALLR 642
+DAY+ AR A QPG RI+S LLT+PLTL+ AL L L+IV +GAR+EASLP WRE++++ P +Q + + +G PG + K P + ++ +T ++ LLH P A+ FVLF+PG +++ W PTL L R+PV T++S +D D LR
Sbjct: 38 MDAYISARLASAGQPGSVLSHRILSSLLTFPLTLSHALSTLFPHPI------PKLNIVVLGARSEASLPASWWREVMYSSPPHIQEVCVKMVG---PGQ--------------KHLKNHPPLQQTLTWTSSESTQRSMTLETGKDISLLHDL----PHCHQLLMEANLFVLFHPGFGTESVQPLWHPTLQMLWHTRKPVFCTAYSPSDLQKDLQYLR 227
BLAST of mRNA_P-wetherbeei_contig6038.2.1 vs. uniprot
Match: A0A662YKI1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YKI1_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.320e-13 Identity = 67/211 (31.75%), Postives = 94/211 (44.55%), Query Frame = 1
Query: 10 LDAYLDARAWQPGDGSGRRIVSHLLTYPLTLASALHRLKASQEGVGKYGDSLSIVCVGARAEASLPLPLWRELLFACPWLQALNIHFIGLDCPGVSPAAGAGNAAGNTIRPAKAGAPSAVNGSTVTATLEGRSVHFSLTRGLLHAAAAVSPDVRAAATAADAFVLFNPGLAAPALRDGWRPTLDFLLPLRRPVVMTSHSDADXXXDAALLR 642
L Y A AW D R++S +Y LTL++ L L + + L + +GARAEA +P LW EL+F ++ +I IG P + T +P G + ST LE + GL H A DAFVL+NPG+ P LR+ WR TL+ +L R+PV++TS S D D L+
Sbjct: 32 LQLYSPANAWLD-DARALRLLSSAYSYVLTLSTFLPELMETDSA--PHAQELKLHVIGARAEAMMPRYLWDELVFFHADMR-FDIKLIGDHVPVM-----------RTRKPKTTGQK--MEDSTSGVRLE-------MINGLYHELEAGKLQTP------DAFVLYNPGVGHPRLRESWRSTLEIVLASRKPVLITSFSVEDQQRDVVALQ 212
BLAST of mRNA_P-wetherbeei_contig6038.2.1 vs. uniprot
Match: A0A4D9CVF1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVF1_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 5.110e-13 Identity = 74/244 (30.33%), Postives = 101/244 (41.39%), Query Frame = 1
Query: 10 LDAYLDARAWQPGD------GSGRRIVSHLLTYPLTLASALHRLKASQEG---VGKYGDSLSIVCVGARAEASLPLPLWRELLFACPWLQALNIHFIGLDCPGVSPAAGAGNAAG-------------------------NTIRPAKAGAPSAVNGSTVTATLEGRSVHFSLTRGLLHAAAAVSPDVRAAATAADAFVLFNPGLAAPALRDGWRPTLDFLLPLRRPVVMTSHSDADXXXDAALL 639
L+ Y+ R W G R++SHLL+YPLTLA L L S VG G + +GARAEA+LP W+E+L P L L H +G + PA AG + ++ R + + +P A++ S+ SP +AA VLFNPGL PAL + W+PTL L + PV+ T+HS D D A L
Sbjct: 869 LEEYVRRRQWAGKSTETLLASPGLRVLSHLLSYPLTLAHYLPSLYGSDTASAKVGSPGGVSHVAIIGARAEATLPDAWWQEVLCMQPGLFCL--HMVGPEV--YDPATRAGRESVRLDPQRQLWMHRRQGLYHVLAPDLVSSFRLSPSPSPPALSASSPGVAATXXXXXXXXXXXXXXXXXXXSPAALSAA------VLFNPGLGHPALAEAWKPTLQCLQAAKVPVLWTAHSAEDRDRDVACL 1102
BLAST of mRNA_P-wetherbeei_contig6038.2.1 vs. uniprot
Match: H3GC15_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GC15_PHYRM) HSP 1 Score: 65.1 bits (157), Expect = 7.850e-9 Identity = 52/161 (32.30%), Postives = 70/161 (43.48%), Query Frame = 1
Query: 160 SLSIVCVGARAEASLPLPLWRELLFACPWLQALNIHFIGLDCPGVSPAAGAGNAAGNTIRPAKAGAPSAVNGSTVTATLEGRSVHFSLTRGLLHAAAAVSPDVRAAATAADAFVLFNPGLAAPALRDGWRPTLDFLLPLRRPVVMTSHSDADXXXDAALLR 642
+L + +GARAEA +P LW EL F P Q I IG P + A+ P+ T E + L GL H + DAFVLFNPG+ P LR+ W+PT+ +L +PV++TS S D D A L+
Sbjct: 185 TLELHVIGARAEAMMPRYLWDELSFFHPGCQ-FGIKLIGDHVP---------------VMTARKKTPT-------TRANENEFIQLELIHGLYHTLETNRLGIP------DAFVLFNPGVGHPRLRESWQPTIQTVLASCKPVLITSFSVEDQQRDIAALQ 316
BLAST of mRNA_P-wetherbeei_contig6038.2.1 vs. uniprot
Match: W2LPA6_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LPA6_PHYPR) HSP 1 Score: 65.1 bits (157), Expect = 7.930e-9 Identity = 54/158 (34.18%), Postives = 67/158 (42.41%), Query Frame = 1
Query: 178 VGARAEASLPLPLWRELLFACPWLQALNIHFIGLDCPGVSPAAGAGNAAGNTIRPAKAGAPSAVNGSTVTATLEGRSVHFSLTRGLLHAAAAV---SPDVRAAATAADAFVLFNPGLAAPALRDGWRPTLDFLLPLRRPVVMTSHSDADXXXDAALLR 642
VGARAEA +P LW EL F P Q I IG P +S + T E + + GL H A SPD AFVL+NPG+ P LR+ W PT+ +L L +PV+MTS S D D A L+
Sbjct: 192 VGARAEAMMPRYLWDELSFFHPG-QQFGIKLIGDHVPVMSTR----------------------KKTPTTRENENEFIQLEMINGLYHEVDAKKLGSPD---------AFVLYNPGIGHPHLRESWEPTMQTVLALGKPVLMTSFSLEDQQRDIAALQ 317
BLAST of mRNA_P-wetherbeei_contig6038.2.1 vs. uniprot
Match: G4ZL84_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZL84_PHYSP) HSP 1 Score: 63.2 bits (152), Expect = 3.630e-8 Identity = 52/155 (33.55%), Postives = 68/155 (43.87%), Query Frame = 1
Query: 178 VGARAEASLPLPLWRELLFACPWLQALNIHFIGLDCPGVSPAAGAGNAAGNTIRPAKAGAPSAVNGSTVTATLEGRSVHFSLTRGLLHAAAAVSPDVRAAATAADAFVLFNPGLAAPALRDGWRPTLDFLLPLRRPVVMTSHSDADXXXDAALLR 642
+GARAEA++P LW EL F P Q I +G P +S A + T E V L GL H + R T DAFVL+NPG+ P LR+ W PT+ +L +PV++TS S D D A L+
Sbjct: 188 IGARAEATMPRYLWDELSFFHPG-QQFAIKIVGDHVPVMS----------------------ARKKTPTTRANENEFVELQLINGLYH-----KIETRKLGTP-DAFVLYNPGIGHPHLRESWDPTIQAVLASCKPVLITSFSLEDQQRDIAALQ 313 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6038.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6038.2.1 >prot_P-wetherbeei_contig6038.2.1 ID=prot_P-wetherbeei_contig6038.2.1|Name=mRNA_P-wetherbeei_contig6038.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=214bp LGGLDAYLDARAWQPGDGSGRRIVSHLLTYPLTLASALHRLKASQEGVGKback to top mRNA from alignment at P-wetherbeei_contig6038:2907..3548- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6038.2.1 ID=mRNA_P-wetherbeei_contig6038.2.1|Name=mRNA_P-wetherbeei_contig6038.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=642bp|location=Sequence derived from alignment at P-wetherbeei_contig6038:2907..3548- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6038:2907..3548- >mRNA_P-wetherbeei_contig6038.2.1 ID=mRNA_P-wetherbeei_contig6038.2.1|Name=mRNA_P-wetherbeei_contig6038.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=642bp|location=Sequence derived from alignment at P-wetherbeei_contig6038:2907..3548- (Phaeothamnion wetherbeei SAG_119_79)back to top |