mRNA_P-wetherbeei_contig6025.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6025.1.1
Unique NamemRNA_P-wetherbeei_contig6025.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6025.1.1 vs. uniprot
Match: A0A1F4F072_9PROT (C4-dicarboxylate ABC transporter permease n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4F072_9PROT)

HSP 1 Score: 665 bits (1717), Expect = 2.420e-238
Identity = 344/432 (79.63%), Postives = 387/432 (89.58%), Query Frame = 1
Query:    1 MIEAMVGLAAMMVLAFVRIPIAFAMGIVGIVGYAYMRDWNWMVAFATAQTKIYETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYAFIGHLRGGLAMATVMACAGFGAICGSSIATAATMAKVAYPSMKKLGYSDALSTGSIAAGGTLGILIPPSTIMVIYGIITETNIGKLFAAGILPGILATVLLCLAVAWSTWRDPKAGPRGERASWAERWEAFKGVWAVVALFTLVMGGIYAGAFTATEGAAMGAVGAMIFAIARKVLTWKSLYASLVESARTTSMLFMILIGALMFAEFVNITTMPADLTNFVSRFQLHPIVVVAAIMVIYVILGTAMEELSMILLTLPVFFPIIVKLGFDPIWFGVLIVVVVEIGLISPPVGMNLFVLSTLLPEVPTRTVFRGVTPFIVADVIRLALLVAFPSIALYLPGLMK 1296
            M EA+VGLAAMM+LAFVR+PIA AM IVG+VGYAYMRDWNW  AFA+ QT++YETGRNYTLSVVPLFILMGNFVTRAGMS ELFRAAYAFIGHLRGGLAMATV+ACAGFGAICGSSIATAATMAKVAYPSMK+ GYSDAL+TG++AAGGTLGI+IPPST++VIYG+ TETNIG LFAAGILPGIL   LLCLAV + TWRDPKAGPRGER  W ERW+  K VWAV ALF  V+GGIY G FTATEGA MGA GAM+FA+ R VL+W SLY +LVESARTTSMLFMILIGALMFAEFVNITTMP DL  +V RF++HP+ VVAAI +IYV+LGTAMEELSM+LLT+PVF P+I++LGFDP+WFG+LIVVVVEIGLISPPVGMNLFVL TL+PEVPT T+FRGV PF++AD +RLALL+AFP I+LYLP LMK
Sbjct:    1 MTEALVGLAAMMLLAFVRVPIALAMAIVGVVGYAYMRDWNWAPAFASLQTRLYETGRNYTLSVVPLFILMGNFVTRAGMSHELFRAAYAFIGHLRGGLAMATVLACAGFGAICGSSIATAATMAKVAYPSMKRFGYSDALATGAVAAGGTLGIMIPPSTLLVIYGVFTETNIGMLFAAGILPGILGAFLLCLAVQYVTWRDPKAGPRGERTGWKERWKTSKDVWAVAALFVFVIGGIYGGLFTATEGAGMGAFGAMVFALWRGVLSWNSLYQALVESARTTSMLFMILIGALMFAEFVNITTMPNDLVAYVKRFEIHPVAVVAAICIIYVLLGTAMEELSMVLLTIPVFLPVILQLGFDPVWFGILIVVVVEIGLISPPVGMNLFVLKTLIPEVPTGTLFRGVLPFMLADCVRLALLIAFPLISLYLPSLMK 432          
BLAST of mRNA_P-wetherbeei_contig6025.1.1 vs. uniprot
Match: A0A537BLT9_9PROT (TRAP transporter large permease n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BLT9_9PROT)

HSP 1 Score: 659 bits (1699), Expect = 6.180e-235
Identity = 358/474 (75.53%), Postives = 394/474 (83.12%), Query Frame = 1
Query:    1 MIEAMVGLAAMMVLAFVRIPIAFAMGIVGIVGYAYMRDWNWMVAFATAQTKIYETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYAFIGHLRGGLAMATVMACAGFGAICGSSIATAATMAKVAYPSMKKLGYSDALSTGSIAAGGTLGILIPPSTIMVIYGIITETNIGKLFAAGILPGILATVLLCLAVAWSTWRDPKAGPRGERASWAERWEA------------------------------------------FKGVWAVVALFTLVMGGIYAGAFTATEGAAMGAVGAMIFAIARKVLTWKSLYASLVESARTTSMLFMILIGALMFAEFVNITTMPADLTNFVSRFQLHPIVVVAAIMVIYVILGTAMEELSMILLTLPVFFPIIVKLGFDPIWFGVLIVVVVEIGLISPPVGMNLFVLSTLLPEVPTRTVFRGVTPFIVADVIRLALLVAFPSIALYLPGLMK 1296
            M EA+ GL AMMVLAF+RIPIA +MGIVGIVGYAYMRDWNW VAFATAQTKIYETGRNYTLSV+PLFILMGN VTRAGMSQELFR AYAFIGHLRGGLAMAT++ CAGFGAICGSSIATAAT AKVAYPSMKK GY+D LSTG+IAAGGTLGILIPPSTIMVIYGI+TETNIGKLFAAGILPG+LATVLLCLAV + TWRDPKAGP GER SW ER                                             +KGV +V+ALFTLVMGGIY G FTA EGAA+GA GAM+FAIAR+ L WK+LYASLVESARTTSMLF+ILIGALMFAEFVNIT+MP +L + V RF+LHPI+VVAAIM IYVILGTAMEELSMILLT+PVFFP++V LG DP+WFG+LIVVVVEIGLISPPVGMNLFVL+TLLP+VPTRT+FRGV PF+ AD IRLA+LVAFP I+ YLPG+MK
Sbjct:    1 MAEALSGLLAMMVLAFLRIPIALSMGIVGIVGYAYMRDWNWAVAFATAQTKIYETGRNYTLSVIPLFILMGNLVTRAGMSQELFRTAYAFIGHLRGGLAMATILGCAGFGAICGSSIATAATFAKVAYPSMKKFGYADYLSTGAIAAGGTLGILIPPSTIMVIYGIMTETNIGKLFAAGILPGVLATVLLCLAVRYITWRDPKAGPPGERMSWRERLATLEGLSAFAAAGVVIIGVAKLGWLDADDAAVIGAFIVFGLALVYKGVTSVIALFTLVMGGIYGGVFTAIEGAAIGAFGAMVFAIARRALNWKTLYASLVESARTTSMLFLILIGALMFAEFVNITSMPGELRDLVKRFELHPILVVAAIMAIYVILGTAMEELSMILLTVPVFFPLVVHLGLDPVWFGILIVVVVEIGLISPPVGMNLFVLNTLLPQVPTRTIFRGVLPFMAADCIRLAILVAFPVISTYLPGMMK 474          
BLAST of mRNA_P-wetherbeei_contig6025.1.1 vs. uniprot
Match: A0A1Q7VMR7_9PROT (C4-dicarboxylate ABC transporter permease n=1 Tax=Betaproteobacteria bacterium 13_1_20CM_3_63_8 TaxID=1805040 RepID=A0A1Q7VMR7_9PROT)

HSP 1 Score: 658 bits (1697), Expect = 1.250e-234
Identity = 358/474 (75.53%), Postives = 394/474 (83.12%), Query Frame = 1
Query:    1 MIEAMVGLAAMMVLAFVRIPIAFAMGIVGIVGYAYMRDWNWMVAFATAQTKIYETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYAFIGHLRGGLAMATVMACAGFGAICGSSIATAATMAKVAYPSMKKLGYSDALSTGSIAAGGTLGILIPPSTIMVIYGIITETNIGKLFAAGILPGILATVLLCLAVAWSTWRDPKAGPRGERASWAERWEAFKGVWA------------------------------------------VVALFTLVMGGIYAGAFTATEGAAMGAVGAMIFAIARKVLTWKSLYASLVESARTTSMLFMILIGALMFAEFVNITTMPADLTNFVSRFQLHPIVVVAAIMVIYVILGTAMEELSMILLTLPVFFPIIVKLGFDPIWFGVLIVVVVEIGLISPPVGMNLFVLSTLLPEVPTRTVFRGVTPFIVADVIRLALLVAFPSIALYLPGLMK 1296
            M EA+ GL AMM+LAF+RIPIA AMGIVGIVGYAYMRDWNW VAFATAQTKIYETGRNYTLSVVPLFILMGNFVTRAGMSQELFR AYAFIGHLRGGLAMAT++ CAGFGAICGSSIATAAT AKVAYPSMKK GY+D L+TG+IAAGGTLGILIPPSTIMVIYGI+TETNIGKLFAAGILPGILATVLLCLAV + TWRDPKAGP GER SW ER+   +G+WA                                          V+ALFTLVMGGIY G FTA EGAA+GA GAMIFA AR+ L+WK+LYASLVESARTT+MLF+ILIGALMFAEFVNITTMP +L + VSRF+LHPI+VVAAIM IYVILGTAMEELSMILLT+PVFFP+IV LG DPIWFG+LIVVVVEIGLISPPVGMNLFVL+TLLP+VPTRT+FRGV PF+  D +RLA+LVA P I+ +LP +MK
Sbjct:    1 MSEALTGLMAMMLLAFLRIPIALAMGIVGIVGYAYMRDWNWAVAFATAQTKIYETGRNYTLSVVPLFILMGNFVTRAGMSQELFRTAYAFIGHLRGGLAMATIVGCAGFGAICGSSIATAATFAKVAYPSMKKFGYADYLATGAIAAGGTLGILIPPSTIMVIYGIMTETNIGKLFAAGILPGILATVLLCLAVQYVTWRDPKAGPPGERQSWRERFATLQGLWAFALVGAALISAAQLKWLASDDAAVIAAFAVFLLALVYKGVSSVIALFTLVMGGIYGGVFTAVEGAAVGAFGAMIFAFARRTLSWKTLYASLVESARTTAMLFLILIGALMFAEFVNITTMPGELKSLVSRFELHPILVVAAIMAIYVILGTAMEELSMILLTVPVFFPLIVHLGLDPIWFGILIVVVVEIGLISPPVGMNLFVLNTLLPQVPTRTIFRGVLPFMAVDCVRLAILVALPIISTWLPSMMK 474          
BLAST of mRNA_P-wetherbeei_contig6025.1.1 vs. uniprot
Match: A0A1F3YCW0_9PROT (C4-dicarboxylate ABC transporter permease n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YCW0_9PROT)

HSP 1 Score: 654 bits (1687), Expect = 4.140e-233
Identity = 358/474 (75.53%), Postives = 393/474 (82.91%), Query Frame = 1
Query:    1 MIEAMVGLAAMMVLAFVRIPIAFAMGIVGIVGYAYMRDWNWMVAFATAQTKIYETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYAFIGHLRGGLAMATVMACAGFGAICGSSIATAATMAKVAYPSMKKLGYSDALSTGSIAAGGTLGILIPPSTIMVIYGIITETNIGKLFAAGILPGILATVLLCLAVAWSTWRDPKAGPRGERASWAER--------WEA----------------------------------FKGVWAVVALFTLVMGGIYAGAFTATEGAAMGAVGAMIFAIARKVLTWKSLYASLVESARTTSMLFMILIGALMFAEFVNITTMPADLTNFVSRFQLHPIVVVAAIMVIYVILGTAMEELSMILLTLPVFFPIIVKLGFDPIWFGVLIVVVVEIGLISPPVGMNLFVLSTLLPEVPTRTVFRGVTPFIVADVIRLALLVAFPSIALYLPGLMK 1296
            M EA+VGL AM+VLA VRIPIA +MGIVGIVGYAYMRDW W  AFATAQTKIYETGRNYTLSVVPLFILMGNFVTRAGMSQELFR AY+FIGHLRGGLAMAT++AC GFGAICGSSIATAAT AKVAYPSMKK GYSDAL+TG+IAAGGTLGILIPPSTIMVIYGI+T TNIGKLFAAGILPG+LA  LLCLAV + TWRDPKAGPRGER SW ER        W A                                  +KGV +V+ALFTLVMGGIY G FTATEGA +GA GA++FA+AR+ L WK+LY +LVESARTTSMLF+ILIGALMFAEFVNITTMP DLT FV++FQ+HP++VVAAIM IYVILGTAMEELSMILLT+PVFFP+IV LG DP+WFGVLIVVVVEIGLISPPVGMNLFVLSTLLP+VPTRTVFRGV PF   D +RLA+L+A PSI+LYLP LMK
Sbjct:    1 MTEALVGLLAMLVLALVRIPIALSMGIVGIVGYAYMRDWTWGAAFATAQTKIYETGRNYTLSVVPLFILMGNFVTRAGMSQELFRCAYSFIGHLRGGLAMATIVACGGFGAICGSSIATAATFAKVAYPSMKKYGYSDALATGAIAAGGTLGILIPPSTIMVIYGIMTGTNIGKLFAAGILPGVLAVSLLCLAVQYVTWRDPKAGPRGERLSWRERFATLDGVVWFAALAVALLAAVQFEALEGDDAAILGAFAVFALSLIYKGVTSVIALFTLVMGGIYGGVFTATEGAGVGATGALVFALARRALDWKALYEALVESARTTSMLFLILIGALMFAEFVNITTMPNDLTAFVTKFQVHPVLVVAAIMAIYVILGTAMEELSMILLTVPVFFPLIVHLGLDPVWFGVLIVVVVEIGLISPPVGMNLFVLSTLLPQVPTRTVFRGVLPFFTMDCVRLAILIAVPSISLYLPSLMK 474          
BLAST of mRNA_P-wetherbeei_contig6025.1.1 vs. uniprot
Match: A0A1F4F778_9PROT (C4-dicarboxylate ABC transporter permease n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4F778_9PROT)

HSP 1 Score: 650 bits (1676), Expect = 4.050e-232
Identity = 329/431 (76.33%), Postives = 383/431 (88.86%), Query Frame = 1
Query:    1 MIEAMVGLAAMMVLAFVRIPIAFAMGIVGIVGYAYMRDWNWMVAFATAQTKIYETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYAFIGHLRGGLAMATVMACAGFGAICGSSIATAATMAKVAYPSMKKLGYSDALSTGSIAAGGTLGILIPPSTIMVIYGIITETNIGKLFAAGILPGILATVLLCLAVAWSTWRDPKAGPRGERASWAERWEAFKGVWAVVALFTLVMGGIYAGAFTATEGAAMGAVGAMIFAIARKVLTWKSLYASLVESARTTSMLFMILIGALMFAEFVNITTMPADLTNFVSRFQLHPIVVVAAIMVIYVILGTAMEELSMILLTLPVFFPIIVKLGFDPIWFGVLIVVVVEIGLISPPVGMNLFVLSTLLPEVPTRTVFRGVTPFIVADVIRLALLVAFPSIALYLPGLM 1293
            MIE ++GLA M++LAF+R+PIA AM I G+VGYAYMRDWNW VAFA  QT +YETGRNYTLSVVPLFILMG+FV RAG++ ELFRAAYAF+GHLRGGLAMATV+ACAGFG+ICGSSIATAATMAKVAYPSMK+ GYSD L+ G+IA+GGTLGI+IPPST+MVIYG+ TETNIGK+FAAGILPGIL  VLLCLAV WSTWRDPKAGP GERA W ERW + + +W V  LF  V+GGIY G FTATEGA MGA GAM+FA+ R+ L WK+LYASLVES RTT+MLFMILIGAL+FA+FVNIT+MP DL + V+RF++HP++VVAAIMVIYV+LGTAMEELSM+LLTLPVFFP+IV LG DP+WFG+L+V +VEIGLISPPVGMNLFVLSTLLP+VPT TVFRGV PF+ ADV+RLA+L+AFP+I+L LP LM
Sbjct:    1 MIEGLIGLAGMLLLAFLRVPIALAMAIAGVVGYAYMRDWNWTVAFAVVQTNVYETGRNYTLSVVPLFILMGSFVARAGIANELFRAAYAFVGHLRGGLAMATVIACAGFGSICGSSIATAATMAKVAYPSMKRFGYSDRLAAGAIASGGTLGIMIPPSTLMVIYGVFTETNIGKMFAAGILPGILGAVLLCLAVQWSTWRDPKAGPPGERAGWRERWASLRDIWPVALLFVFVIGGIYGGLFTATEGAGMGAFGAMVFALWRRALDWKALYASLVESGRTTAMLFMILIGALVFADFVNITSMPDDLKSLVTRFEVHPVMVVAAIMVIYVLLGTAMEELSMVLLTLPVFFPLIVSLGLDPVWFGILVVTIVEIGLISPPVGMNLFVLSTLLPQVPTTTVFRGVLPFMAADVVRLAILIAFPAISLTLPNLM 431          
BLAST of mRNA_P-wetherbeei_contig6025.1.1 vs. uniprot
Match: A0A521YUJ3_9PROT (TRAP transporter large permease n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YUJ3_9PROT)

HSP 1 Score: 649 bits (1675), Expect = 5.970e-232
Identity = 333/432 (77.08%), Postives = 383/432 (88.66%), Query Frame = 1
Query:    1 MIEAMVGLAAMMVLAFVRIPIAFAMGIVGIVGYAYMRDWNWMVAFATAQTKIYETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYAFIGHLRGGLAMATVMACAGFGAICGSSIATAATMAKVAYPSMKKLGYSDALSTGSIAAGGTLGILIPPSTIMVIYGIITETNIGKLFAAGILPGILATVLLCLAVAWSTWRDPKAGPRGERASWAERWEAFKGVWAVVALFTLVMGGIYAGAFTATEGAAMGAVGAMIFAIARKVLTWKSLYASLVESARTTSMLFMILIGALMFAEFVNITTMPADLTNFVSRFQLHPIVVVAAIMVIYVILGTAMEELSMILLTLPVFFPIIVKLGFDPIWFGVLIVVVVEIGLISPPVGMNLFVLSTLLPEVPTRTVFRGVTPFIVADVIRLALLVAFPSIALYLPGLMK 1296
            M EA+VGL AM++L+ +RIPIA +M +VG+VGYAYMRDWNW  AFA+ QT++YETGRNYTLSVVPLFILMGNFVTRAGMSQ+LFRAA AF+GHLRGGLAMAT++ACAGFGAICGSSIATAATMAKVAYPSMK+ GY+D LSTG+IA+GGTLGI+IPPSTI+V+YGI TETNIGKLFAAGILPG L   LLC+AV + TWRDPKAGPRGER+ W ERW A K VWAV ALF  VMGGIY G FTATEGA MGA GAM+FA+ R+ LTW+SLY +L+ESARTTSMLF ILIGALMF EF+NITTMP+DL +FV RF +HP  VVAAI +IYV+LGTAMEELSM+LLT+PVF P+I++LGFDPIWFG+LIVVVVEIGLISPPVGMNLFVL TL+PEV   TVFRGV PF+VAD +R+ LL+AFP+I+LYLPGLMK
Sbjct:    1 MTEALVGLLAMLLLSLIRIPIALSMALVGVVGYAYMRDWNWAPAFASLQTRLYETGRNYTLSVVPLFILMGNFVTRAGMSQQLFRAANAFVGHLRGGLAMATILACAGFGAICGSSIATAATMAKVAYPSMKRYGYADTLSTGAIASGGTLGIMIPPSTILVLYGIFTETNIGKLFAAGILPGTLGAFLLCIAVQYVTWRDPKAGPRGERSDWKERWLATKDVWAVAALFVFVMGGIYGGMFTATEGAGMGAFGAMVFALWRRALTWRSLYQALLESARTTSMLFTILIGALMFGEFINITTMPSDLVSFVKRFAIHPYAVVAAICIIYVLLGTAMEELSMVLLTIPVFLPVILQLGFDPIWFGILIVVVVEIGLISPPVGMNLFVLKTLIPEVHQNTVFRGVLPFMVADCVRMTLLIAFPAISLYLPGLMK 432          
BLAST of mRNA_P-wetherbeei_contig6025.1.1 vs. uniprot
Match: A0A3N5IT77_9BACT (TRAP transporter large permease n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A3N5IT77_9BACT)

HSP 1 Score: 635 bits (1639), Expect = 1.790e-226
Identity = 329/432 (76.16%), Postives = 376/432 (87.04%), Query Frame = 1
Query:    1 MIEAMVGLAAMMVLAFVRIPIAFAMGIVGIVGYAYMRDWNWMVAFATAQTKIYETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYAFIGHLRGGLAMATVMACAGFGAICGSSIATAATMAKVAYPSMKKLGYSDALSTGSIAAGGTLGILIPPSTIMVIYGIITETNIGKLFAAGILPGILATVLLCLAVAWSTWRDPKAGPRGERASWAERWEAFKGVWAVVALFTLVMGGIYAGAFTATEGAAMGAVGAMIFAIARKVLTWKSLYASLVESARTTSMLFMILIGALMFAEFVNITTMPADLTNFVSRFQLHPIVVVAAIMVIYVILGTAMEELSMILLTLPVFFPIIVKLGFDPIWFGVLIVVVVEIGLISPPVGMNLFVLSTLLPEVPTRTVFRGVTPFIVADVIRLALLVAFPSIALYLPGLMK 1296
            M E ++GL  MM LAF R+PIA +MG+VGIVGYAYMRDWNW VAFA AQTK+YETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYAFIGHLRGGLAMATV A AGFG ICGSSIATAATMAKVAYPSM+  GYS  L+ G+IAAGGTLGI+IPPSTI+VIYG+ TETNIGKLFAAG++PG+L   LLC+AVA++TWRDP++GP G+R SW ERW A + VWAV  LF  VMGGIY G FTATEGA MGA GAM FA+ R+ LTW++LYA+L+ESARTT+MLFMILIGAL+FAEFVNITTMP DL +FV+RF LHP +V+ AI  IYV+LGTAMEELSM+LLTLPVFFP++V LGFDP+WFG++IV VVEIGLISPPVGMNLFVL TLLP+V T TVFRGV PF  ADV+RLA+LV FP +AL+LP LM+
Sbjct:    1 MTEGILGLTLMMALAFFRVPIALSMGVVGIVGYAYMRDWNWTVAFAIAQTKVYETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYAFIGHLRGGLAMATVWASAGFGGICGSSIATAATMAKVAYPSMQLFGYSQRLAAGAIAAGGTLGIMIPPSTILVIYGVFTETNIGKLFAAGVVPGVLGATLLCMAVAYTTWRDPRSGPPGQRTSWRERWRAVRDVWAVAVLFAFVMGGIYGGFFTATEGAGMGAFGAMTFALWRRALTWRTLYAALLESARTTAMLFMILIGALIFAEFVNITTMPGDLKDFVTRFDLHPTLVMLAICGIYVVLGTAMEELSMVLLTLPVFFPVVVHLGFDPVWFGIIIVCVVEIGLISPPVGMNLFVLKTLLPDVSTGTVFRGVMPFFWADVLRLAVLVVFPWLALWLPSLMR 432          
BLAST of mRNA_P-wetherbeei_contig6025.1.1 vs. uniprot
Match: A0A536WYH5_9PROT (TRAP transporter large permease n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WYH5_9PROT)

HSP 1 Score: 636 bits (1641), Expect = 4.110e-226
Identity = 340/474 (71.73%), Postives = 388/474 (81.86%), Query Frame = 1
Query:    1 MIEAMVGLAAMMVLAFVRIPIAFAMGIVGIVGYAYMRDWNWMVAFATAQTKIYETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYAFIGHLRGGLAMATVMACAGFGAICGSSIATAATMAKVAYPSMKKLGYSDALSTGSIAAGGTLGILIPPSTIMVIYGIITETNIGKLFAAGILPGILATVLLCLAVAWSTWRDPKAGPRGERASWAERWEA------------------------------------------FKGVWAVVALFTLVMGGIYAGAFTATEGAAMGAVGAMIFAIARKVLTWKSLYASLVESARTTSMLFMILIGALMFAEFVNITTMPADLTNFVSRFQLHPIVVVAAIMVIYVILGTAMEELSMILLTLPVFFPIIVKLGFDPIWFGVLIVVVVEIGLISPPVGMNLFVLSTLLPEVPTRTVFRGVTPFIVADVIRLALLVAFPSIALYLPGLMK 1296
            M EA++GLAAMM+LAF+RIPIA AM +VG++GYAYMRDW+W  A A AQTK++ETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAY+FIGH RGGLAMAT++ CAGFGAICGSSIATAAT AKVAYPSMKK GY+D LSTG+IAAGGTLGILIPPSTIMVIYGI+TETNIGKLFAAG+LPGILATVLLCL V + TWRDP+AGPRGER SW  RW                                            +KGV +V+ALF LVMGGIY G FTA EGA +GA GAM+FA+AR+ L W+ LY +L+ESARTTSMLF+ILIGALMFAEFVNITTMPADL  FVSRF++HP++VVAAIMVIYV+LGTAMEELSMILLT+P+FFP+IV +G DP+WFG+LIVVVVEIGLISPPVGMNLFVL+TLLP+VPTRT+FRGV PF+V D +RLA+L AFP I+  LP  MK
Sbjct:    1 MSEALIGLAAMMLLAFLRIPIALAMAVVGVIGYAYMRDWSWGGALAMAQTKVFETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYSFIGHRRGGLAMATIIGCAGFGAICGSSIATAATFAKVAYPSMKKFGYADYLSTGAIAAGGTLGILIPPSTIMVIYGIMTETNIGKLFAAGVLPGILATVLLCLMVQYVTWRDPRAGPRGERTSWRSRWATVAGLQWFAAVGVAIWLAVHSGWVASDDAAVIGAFVVFIMSLIYKGVSSVIALFVLVMGGIYGGVFTAVEGAGVGAFGAMVFALARRALGWRELYEALLESARTTSMLFLILIGALMFAEFVNITTMPADLKAFVSRFEVHPLMVVAAIMVIYVVLGTAMEELSMILLTVPLFFPLIVHMGLDPVWFGILIVVVVEIGLISPPVGMNLFVLNTLLPQVPTRTIFRGVMPFVVIDCVRLAILTAFPIISTLLPSYMK 474          
BLAST of mRNA_P-wetherbeei_contig6025.1.1 vs. uniprot
Match: A0A2V6T6D4_9BACT (C4-dicarboxylate ABC transporter permease n=14 Tax=Bacteria TaxID=2 RepID=A0A2V6T6D4_9BACT)

HSP 1 Score: 629 bits (1623), Expect = 4.880e-224
Identity = 333/432 (77.08%), Postives = 376/432 (87.04%), Query Frame = 1
Query:    1 MIEAMVGLAAMMVLAFVRIPIAFAMGIVGIVGYAYMRDWNWMVAFATAQTKIYETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYAFIGHLRGGLAMATVMACAGFGAICGSSIATAATMAKVAYPSMKKLGYSDALSTGSIAAGGTLGILIPPSTIMVIYGIITETNIGKLFAAGILPGILATVLLCLAVAWSTWRDPKAGPRGERASWAERWEAFKGVWAVVALFTLVMGGIYAGAFTATEGAAMGAVGAMIFAIARKVLTWKSLYASLVESARTTSMLFMILIGALMFAEFVNITTMPADLTNFVSRFQLHPIVVVAAIMVIYVILGTAMEELSMILLTLPVFFPIIVKLGFDPIWFGVLIVVVVEIGLISPPVGMNLFVLSTLLPEVPTRTVFRGVTPFIVADVIRLALLVAFPSIALYLPGLMK 1296
            MIE +VGL  MM+L  +R+PI+FAM IVG VGYAYMRDWNW VA AT QTK+YETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYAFIGHLRGGLAMATV A AGFG ICGSSIATAAT AKVAYPSMK+ GYSD L+ G +A GGTLGI+IPPSTIMVIYG+ TETNIGKLFAAGILPGIL  +LLC AV + TWRDP++GP GER+SW ER  A K VWAV ALF  VMGGIY G FTATEGAAMGA GAM+FA++R+ LTW++LYA+L+ESARTTSMLFMILIGAL+FAEFVNITTMP DL  +V+RF + P +VVAAI  +YV+LGTAMEELSMILLT+PVFFP+IV LGFDPIWFG++IV VVEIGLISPPVGMN+FVL TL+PEV T TVF GV PF+ ADVIRLA+LVAFP I+L+LP +M+
Sbjct:    1 MIEGLVGLVVMMLLCCLRVPISFAMAIVGFVGYAYMRDWNWAVAAATVQTKMYETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYAFIGHLRGGLAMATVWASAGFGGICGSSIATAATFAKVAYPSMKRFGYSDRLAAGVVAGGGTLGIMIPPSTIMVIYGVFTETNIGKLFAAGILPGILGAILLCGAVQYMTWRDPRSGPPGERSSWRERLLALKDVWAVAALFFFVMGGIYIGFFTATEGAAMGAFGAMLFALSRRALTWRTLYAALLESARTTSMLFMILIGALIFAEFVNITTMPNDLKAWVTRFNVSPTMVVAAICAVYVVLGTAMEELSMILLTIPVFFPVIVHLGFDPIWFGIIIVCVVEIGLISPPVGMNMFVLRTLIPEVSTATVFSGVLPFMWADVIRLAILVAFPIISLWLPSMMR 432          
BLAST of mRNA_P-wetherbeei_contig6025.1.1 vs. uniprot
Match: A0A831Y720_9BACT (TRAP transporter large permease n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A831Y720_9BACT)

HSP 1 Score: 625 bits (1611), Expect = 3.270e-222
Identity = 326/432 (75.46%), Postives = 373/432 (86.34%), Query Frame = 1
Query:    1 MIEAMVGLAAMMVLAFVRIPIAFAMGIVGIVGYAYMRDWNWMVAFATAQTKIYETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYAFIGHLRGGLAMATVMACAGFGAICGSSIATAATMAKVAYPSMKKLGYSDALSTGSIAAGGTLGILIPPSTIMVIYGIITETNIGKLFAAGILPGILATVLLCLAVAWSTWRDPKAGPRGERASWAERWEAFKGVWAVVALFTLVMGGIYAGAFTATEGAAMGAVGAMIFAIARKVLTWKSLYASLVESARTTSMLFMILIGALMFAEFVNITTMPADLTNFVSRFQLHPIVVVAAIMVIYVILGTAMEELSMILLTLPVFFPIIVKLGFDPIWFGVLIVVVVEIGLISPPVGMNLFVLSTLLPEVPTRTVFRGVTPFIVADVIRLALLVAFPSIALYLPGLMK 1296
            M E +VGLA +M++AF+R+PIA AMG+VGIVGYAY+RDWNW VAFA AQTK+YETGR+YTLSVVPLFILMGNFVTRAG+SQELFRAAYAFIGHLRGGLAMATV A AGFG ICGSSIATAATMAKVAYPSMK+ GYSD L+ G +A  GTLGI+IPPSTIMVIYG+ TETNIG+LFAAGILPG+L   LLC AV ++TWRDP +GP GERASW ERW A + VW V ALF  VMGGIY G FTATEGA MGA GA++ A++R+ LTW++LY +L+ESARTT+MLFMILIGALMFAEFVNITTMP DL   V+   L P++VV AI VIYVILGTAMEELSM+LLT+PVFFP++V LGFDPIWFGV+IV VVEIGLISPPVGMN+FVL +LLP+VPT TVF GV PF  ADV+RLALLVA P +AL+LPGL +
Sbjct:    1 MTEGLVGLALIMLIAFLRVPIALAMGVVGIVGYAYVRDWNWTVAFALAQTKVYETGRSYTLSVVPLFILMGNFVTRAGLSQELFRAAYAFIGHLRGGLAMATVWASAGFGGICGSSIATAATMAKVAYPSMKRFGYSDRLAAGVVAGAGTLGIMIPPSTIMVIYGVFTETNIGQLFAAGILPGLLGATLLCAAVQYTTWRDPASGPPGERASWGERWRAVRHVWGVAALFLFVMGGIYGGLFTATEGAGMGAAGALLLALSRRALTWRTLYEALLESARTTAMLFMILIGALMFAEFVNITTMPGDLRALVTGLDLPPVLVVGAICVIYVILGTAMEELSMVLLTIPVFFPVVVSLGFDPIWFGVVIVCVVEIGLISPPVGMNMFVLKSLLPQVPTGTVFSGVMPFFWADVLRLALLVAVPWLALWLPGLTR 432          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6025.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4F072_9PROT2.420e-23879.63C4-dicarboxylate ABC transporter permease n=1 Tax=... [more]
A0A537BLT9_9PROT6.180e-23575.53TRAP transporter large permease n=3 Tax=Betaproteo... [more]
A0A1Q7VMR7_9PROT1.250e-23475.53C4-dicarboxylate ABC transporter permease n=1 Tax=... [more]
A0A1F3YCW0_9PROT4.140e-23375.53C4-dicarboxylate ABC transporter permease n=1 Tax=... [more]
A0A1F4F778_9PROT4.050e-23276.33C4-dicarboxylate ABC transporter permease n=1 Tax=... [more]
A0A521YUJ3_9PROT5.970e-23277.08TRAP transporter large permease n=1 Tax=Betaproteo... [more]
A0A3N5IT77_9BACT1.790e-22676.16TRAP transporter large permease n=1 Tax=Candidatus... [more]
A0A536WYH5_9PROT4.110e-22671.73TRAP transporter large permease n=2 Tax=Betaproteo... [more]
A0A2V6T6D4_9BACT4.880e-22477.08C4-dicarboxylate ABC transporter permease n=14 Tax... [more]
A0A831Y720_9BACT3.270e-22275.46TRAP transporter large permease n=1 Tax=Candidatus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6025contigP-wetherbeei_contig6025:63..1361 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1100721.ALKO01000021_gene587
PFAMsDctM
Model size1299
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue3.26e-188
EggNOG OGsCOG1593@1|root,COG1593@2|Bacteria,1MU0F@1224|Proteobacteria,2VIE2@28216|Betaproteobacteria,4ACB3@80864|Comamonadaceae
DescriptionPFAM TRAP C4-dicarboxylate transport system permease DctM subunit
Cds size1299
COG categoryG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186883.5567415-CDS-P-wetherbeei_contig6025:62..13611683186883.5567415-CDS-P-wetherbeei_contig6025:62..1361Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6025 63..1361 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6025.1.1prot_P-wetherbeei_contig6025.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6025 63..1361 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6025.1.1

>prot_P-wetherbeei_contig6025.1.1 ID=prot_P-wetherbeei_contig6025.1.1|Name=mRNA_P-wetherbeei_contig6025.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=433bp
MIEAMVGLAAMMVLAFVRIPIAFAMGIVGIVGYAYMRDWNWMVAFATAQT
KIYETGRNYTLSVVPLFILMGNFVTRAGMSQELFRAAYAFIGHLRGGLAM
ATVMACAGFGAICGSSIATAATMAKVAYPSMKKLGYSDALSTGSIAAGGT
LGILIPPSTIMVIYGIITETNIGKLFAAGILPGILATVLLCLAVAWSTWR
DPKAGPRGERASWAERWEAFKGVWAVVALFTLVMGGIYAGAFTATEGAAM
GAVGAMIFAIARKVLTWKSLYASLVESARTTSMLFMILIGALMFAEFVNI
TTMPADLTNFVSRFQLHPIVVVAAIMVIYVILGTAMEELSMILLTLPVFF
PIIVKLGFDPIWFGVLIVVVVEIGLISPPVGMNLFVLSTLLPEVPTRTVF
RGVTPFIVADVIRLALLVAFPSIALYLPGLMK*
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mRNA from alignment at P-wetherbeei_contig6025:63..1361+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6025.1.1 ID=mRNA_P-wetherbeei_contig6025.1.1|Name=mRNA_P-wetherbeei_contig6025.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1299bp|location=Sequence derived from alignment at P-wetherbeei_contig6025:63..1361+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATCGAAGCGATGGTCGGCCTCGCGGCCATGATGGTGCTCGCGTTCGT GCGCATCCCGATCGCCTTCGCGATGGGCATCGTCGGCATCGTCGGCTACG CCTACATGCGCGACTGGAACTGGATGGTCGCCTTCGCCACGGCGCAGACC AAGATCTACGAGACCGGGCGCAATTACACGCTGTCGGTGGTGCCCCTCTT CATCCTGATGGGCAACTTCGTCACGCGCGCAGGCATGTCGCAGGAACTGT TCCGCGCCGCCTACGCCTTCATCGGCCACCTGAGGGGCGGCCTGGCGATG GCCACCGTGATGGCCTGCGCGGGGTTCGGCGCGATCTGCGGCTCGTCCAT CGCCACCGCCGCGACGATGGCGAAGGTCGCCTACCCCTCGATGAAGAAGC TCGGCTATTCGGACGCGCTGTCCACCGGCTCGATCGCCGCGGGCGGCACG CTCGGCATCCTGATCCCGCCGTCCACGATCATGGTGATCTACGGGATCAT CACCGAGACCAACATAGGCAAGCTGTTCGCGGCGGGCATCCTGCCCGGGA TACTGGCCACGGTCCTGCTGTGCCTGGCGGTGGCCTGGTCCACGTGGCGC GACCCGAAGGCCGGACCGCGCGGCGAGCGCGCAAGCTGGGCCGAACGCTG GGAGGCCTTCAAGGGCGTCTGGGCGGTCGTCGCGCTGTTCACGCTGGTGA TGGGCGGCATCTACGCGGGCGCCTTCACGGCGACCGAAGGCGCGGCGATG GGCGCGGTCGGCGCGATGATCTTCGCCATCGCCCGCAAGGTCCTCACATG GAAATCGCTGTACGCGTCGCTGGTGGAGAGCGCGCGCACGACGTCGATGC TCTTCATGATCCTGATCGGCGCGCTGATGTTCGCGGAGTTCGTCAACATC ACCACCATGCCCGCGGACCTGACGAACTTCGTCTCGCGCTTCCAGCTGCA CCCCATCGTGGTGGTCGCCGCGATCATGGTGATCTACGTCATCCTCGGCA CGGCGATGGAGGAGCTCTCCATGATCCTGCTGACGCTGCCGGTGTTCTTC CCGATCATCGTGAAGCTCGGATTCGACCCGATCTGGTTCGGCGTGCTGAT CGTGGTGGTGGTGGAGATCGGGCTGATCAGCCCGCCGGTGGGCATGAACC TCTTCGTGCTGTCCACGCTGCTGCCCGAGGTGCCGACCCGCACGGTGTTC CGTGGCGTGACGCCGTTCATCGTCGCCGACGTGATCCGGCTCGCGCTGCT GGTGGCATTCCCTTCGATCGCGTTGTACCTGCCGGGCCTGATGAAATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6025:63..1361+

>mRNA_P-wetherbeei_contig6025.1.1 ID=mRNA_P-wetherbeei_contig6025.1.1|Name=mRNA_P-wetherbeei_contig6025.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1299bp|location=Sequence derived from alignment at P-wetherbeei_contig6025:63..1361+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATCGAAGCGATGGTCGGCCTCGCGGCCATGATGGTGCTCGCGTTCGT
GCGCATCCCGATCGCCTTCGCGATGGGCATCGTCGGCATCGTCGGCTACG
CCTACATGCGCGACTGGAACTGGATGGTCGCCTTCGCCACGGCGCAGACC
AAGATCTACGAGACCGGGCGCAATTACACGCTGTCGGTGGTGCCCCTCTT
CATCCTGATGGGCAACTTCGTCACGCGCGCAGGCATGTCGCAGGAACTGT
TCCGCGCCGCCTACGCCTTCATCGGCCACCTGAGGGGCGGCCTGGCGATG
GCCACCGTGATGGCCTGCGCGGGGTTCGGCGCGATCTGCGGCTCGTCCAT
CGCCACCGCCGCGACGATGGCGAAGGTCGCCTACCCCTCGATGAAGAAGC
TCGGCTATTCGGACGCGCTGTCCACCGGCTCGATCGCCGCGGGCGGCACG
CTCGGCATCCTGATCCCGCCGTCCACGATCATGGTGATCTACGGGATCAT
CACCGAGACCAACATAGGCAAGCTGTTCGCGGCGGGCATCCTGCCCGGGA
TACTGGCCACGGTCCTGCTGTGCCTGGCGGTGGCCTGGTCCACGTGGCGC
GACCCGAAGGCCGGACCGCGCGGCGAGCGCGCAAGCTGGGCCGAACGCTG
GGAGGCCTTCAAGGGCGTCTGGGCGGTCGTCGCGCTGTTCACGCTGGTGA
TGGGCGGCATCTACGCGGGCGCCTTCACGGCGACCGAAGGCGCGGCGATG
GGCGCGGTCGGCGCGATGATCTTCGCCATCGCCCGCAAGGTCCTCACATG
GAAATCGCTGTACGCGTCGCTGGTGGAGAGCGCGCGCACGACGTCGATGC
TCTTCATGATCCTGATCGGCGCGCTGATGTTCGCGGAGTTCGTCAACATC
ACCACCATGCCCGCGGACCTGACGAACTTCGTCTCGCGCTTCCAGCTGCA
CCCCATCGTGGTGGTCGCCGCGATCATGGTGATCTACGTCATCCTCGGCA
CGGCGATGGAGGAGCTCTCCATGATCCTGCTGACGCTGCCGGTGTTCTTC
CCGATCATCGTGAAGCTCGGATTCGACCCGATCTGGTTCGGCGTGCTGAT
CGTGGTGGTGGTGGAGATCGGGCTGATCAGCCCGCCGGTGGGCATGAACC
TCTTCGTGCTGTCCACGCTGCTGCCCGAGGTGCCGACCCGCACGGTGTTC
CGTGGCGTGACGCCGTTCATCGTCGCCGACGTGATCCGGCTCGCGCTGCT
GGTGGCATTCCCTTCGATCGCGTTGTACCTGCCGGGCCTGATGAAATAG
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