prot_P-wetherbeei_contig6019.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6019.1.1
Unique Nameprot_P-wetherbeei_contig6019.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length371
Homology
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BLAST of mRNA_P-wetherbeei_contig6019.1.1 vs. uniprot
Match: A0A401SG82_CHIPU (Hedgehog protein n=2 Tax=Orectolobiformes TaxID=30503 RepID=A0A401SG82_CHIPU)

HSP 1 Score: 57.0 bits (136), Expect = 2.600e-5
Identity = 56/203 (27.59%), Postives = 83/203 (40.89%), Query Frame = 0 
Query:   17 CFPGDATVLLEDGRETPVRELRVGDRAQCFRSDEGAFGFCEVLTFTTADPDGAADLLRVQYKDGVEGVDGAGGDTAFPHFVDMNEEHFVWALRLFTNAQPNPSTAEAEPYDLPFGAMFRARDVRIGDLLISPAVADADAAAAATAHSGTAAEAAKHAKYQLHEVVGISERHSDGNGHYSPFAEHGAMPVINGITVSTFSGKEG 219
            CFPG+A+VL+EDGR   V +L+ GDR Q      G   F   +TF   DP       +++  +              P  + +   H V+    FT+   +P           F A F A +VR+G  L                HSG          ++   V GIS R  +G   Y+P  +HG + V+NG+  S F+  +G
Sbjct:  201 CFPGNASVLMEDGRRKRVSDLQPGDRVQTV-DHGGNVVFSSFVTFLDRDPRAVKVFHQLETLEP-------------PRRLLLTAAHLVFVADNFTS---DPGK---------FRATF-ASNVRVGQYLY------------VVGHSG----------HRPARVTGISMRELEGA--YAPLTQHGTL-VVNGVLASCFAAIDG 351
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6019.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A401SG82_CHIPU2.600e-527.59Hedgehog protein n=2 Tax=Orectolobiformes TaxID=30... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 15..149
e-value: 5.7E-6
score: 35.8
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 16..80
e-value: 7.2E-9
score: 35.4
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 17..215
e-value: 3.0E-18
score: 68.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..370
NoneNo IPR availablePANTHERPTHR11889HEDGEHOGcoord: 16..216
NoneNo IPR availableCDDcd00081Hintcoord: 17..148
e-value: 8.56605E-6
score: 43.0266
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 17..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6019contigP-wetherbeei_contig6019:896..2461 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6019.1.1mRNA_P-wetherbeei_contig6019.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6019 718..3012 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6019.1.1 ID=prot_P-wetherbeei_contig6019.1.1|Name=mRNA_P-wetherbeei_contig6019.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=371bp
MLFLLLLFSLLEGLATCFPGDATVLLEDGRETPVRELRVGDRAQCFRSDE
GAFGFCEVLTFTTADPDGAADLLRVQYKDGVEGVDGAGGDTAFPHFVDMN
EEHFVWALRLFTNAQPNPSTAEAEPYDLPFGAMFRARDVRIGDLLISPAV
ADADAAAAATAHSGTAAEAAKHAKYQLHEVVGISERHSDGNGHYSPFAEH
GAMPVINGITVSTFSGKEGTPRHSWLLWYSLWGQEPNSTRGTTGTGEGGS
GLPTGEDRLRTRGVRAADLKASSWVYASGRDAFAGAVRDLLELLWRRDGV
VVDFAAVMDHIGALAAVGVRITARETMEILAAHASLPSAGDDVGMAGHRH
RHHSVRRNNEIDDTSGSPQW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf