mRNA_P-wetherbeei_contig6016.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6016.1.1 vs. uniprot
Match: UPI0019FD816E (Glycine zipper 2TM domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019FD816E) HSP 1 Score: 126 bits (316), Expect = 7.820e-35 Identity = 56/110 (50.91%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 79 QIGDGNGRTAAIIGGTLIGAMFGSNIGRGMSPYDHSHAASVFEATPSNQTMAWQNPDYGTAYQVTPVRTFQANDGRYCREYQALATVGGRREQAYGTACRTPDGDWQIMN 408
Q+G G+G+TAA+IGGT +IGR M D + + E P NQ + WQ+ G YQ+TP +Q GRYCREYQ+ AT+GGR++Q YGTACR PDG WQIMN
Sbjct: 16 QVGSGHGKTAAVIGGTXXXXXXXGHIGRSMDDVDQNCVGQILEHAPPNQPITWQDRSGGGQYQLTPSEAYQDRQGRYCREYQSTATIGGRQQQTYGTACRQPDGSWQIMN 125
BLAST of mRNA_P-wetherbeei_contig6016.1.1 vs. uniprot
Match: UPI0019064D42 (RT0821/Lpp0805 family surface protein n=1 Tax=Rhodovibrio sodomensis TaxID=1088 RepID=UPI0019064D42) HSP 1 Score: 127 bits (319), Expect = 4.640e-34 Identity = 56/110 (50.91%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 79 QIGDGNGRTAAIIGGTLIGAMFGSNIGRGMSPYDHSHAASVFEATPSNQTMAWQNPDYGTAYQVTPVRTFQANDGRYCREYQALATVGGRREQAYGTACRTPDGDWQIMN 408
Q G G+G+ G LIG + G IGRG+ D + E P+ QT+AWQNPD G Y+ TP RT+Q + GRYCREY ATVGGR++Q YGTACR PDG W+I++
Sbjct: 112 QFGKGDGQLVTTGAGALIGVLLGGEIGRGLDSQDRACIGRTLETVPTGQTVAWQNPDNGAEYRTTPRRTYQTSSGRYCREYTTSATVGGRQQQVYGTACRQPDGSWEIVS 221
BLAST of mRNA_P-wetherbeei_contig6016.1.1 vs. uniprot
Match: A0A4P7C3V2_9GAMM (Glycine zipper 2TM domain-containing protein n=1 Tax=Nitrosococcus wardiae TaxID=1814290 RepID=A0A4P7C3V2_9GAMM) HSP 1 Score: 121 bits (304), Expect = 5.180e-33 Identity = 58/110 (52.73%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 79 QIGDGNGRTAAIIGGTLIGAMFGSNIGRGMSPYDHSHAASVFEATPSNQTMAWQNPDYGTAYQVTPVRTFQANDGRYCREYQALATVGGRREQAYGTACRTPDGDWQIMN 408
QIGDG GR AIIGGTL G G IGR M DH E P +T+ W+ P +QV P TFQANDGRYCREY A + +G + Q YGTACR PDG W+I N
Sbjct: 16 QIGDGRGRIIAIIGGTLAGFFLGGEIGRTMDEADHLCVDQALEYAPDGKTIEWRTPGENQRHQVIPHETFQANDGRYCREYTAKSIIGDKTVQTYGTACRQPDGSWRIAN 125
BLAST of mRNA_P-wetherbeei_contig6016.1.1 vs. uniprot
Match: UPI00197D99E7 (glycine zipper 2TM domain-containing protein n=1 Tax=Nitrosococcus wardiae TaxID=1814290 RepID=UPI00197D99E7) HSP 1 Score: 120 bits (302), Expect = 2.790e-31 Identity = 68/132 (51.52%), Postives = 78/132 (59.09%), Query Frame = 1
Query: 13 GRQDSNLLGGLXXXXXXXXXXXQIGDGNGRTAAIIGGTLIGAMFGSNIGRGMSPYDHSHAASVFEATPSNQTMAWQNPDYGTAYQVTPVRTFQANDGRYCREYQALATVGGRREQAYGTACRTPDGDWQIMN 408
GR + L+G L XXXXXXX GDG GR AIIGGTL G G IGR M DH E P +T+ W+ P +QV P TFQANDGRYCREY A + +G + Q YGTACR PDG W+I N
Sbjct: 115 GRCNRELIGQLLGGAXXXXXXXXXGDGRGRIIAIIGGTLAGFFLGGEIGRTMDEADHLCVDQALEYAPDGKTIEWRTPGENQRHQVIPHETFQANDGRYCREYTAKSIIGDKTVQTYGTACRQPDGSWRIAN 246
BLAST of mRNA_P-wetherbeei_contig6016.1.1 vs. uniprot
Match: A0A1G7QSV7_9HYPH (17 kDa surface antigen n=1 Tax=Limimonas halophila TaxID=1082479 RepID=A0A1G7QSV7_9HYPH) HSP 1 Score: 119 bits (298), Expect = 6.300e-31 Identity = 59/132 (44.70%), Postives = 75/132 (56.82%), Query Frame = 1
Query: 13 GRQDSNLLGGLXXXXXXXXXXXQIGDGNGRTAAIIGGTLIGAMFGSNIGRGMSPYDHSHAASVFEATPSNQTMAWQNPDYGTAYQVTPVRTFQANDGRYCREYQALATVGGRREQAYGTACRTPDGDWQIMN 408
GR + LG + QIGDG+ R AAIIGG + G + G IGR M DH E P+ +T+ W+NPD +QVTP T+Q GRY REY A +T+GG Q YGTACR PDG W+I++
Sbjct: 88 GRCNREALGRILGGAAGAAAGSQIGDGDERIAAIIGGAIAGVLLGGEIGRAMDRADHLCVDQALENAPTGRTVEWRNPDTHRRHQVTPRETYQTESGRYRREYTATSTIGGETVQTYGTACRQPDGAWKIVS 219
BLAST of mRNA_P-wetherbeei_contig6016.1.1 vs. uniprot
Match: A0A1Y6BN51_9HYPH (17 kDa surface antigen n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6BN51_9HYPH) HSP 1 Score: 118 bits (296), Expect = 9.760e-31 Identity = 56/129 (43.41%), Postives = 78/129 (60.47%), Query Frame = 1
Query: 22 DSNLLGGLXXXXXXXXXXXQIGDGNGRTAAIIGGTLIGAMFGSNIGRGMSPYDHSHAASVFEATPSNQTMAWQNPDYGTAYQVTPVRTFQANDGRYCREYQALATVGGRREQAYGTACRTPDGDWQIMN 408
D+ L+G + QIG GNG+ AA GG ++G + G IGR D + A EA + +T+ W++PD G Y++TP RTF+ DG YCREY A+VGGR ++ YGTACR PDG W+++N
Sbjct: 86 DNQLVGQILGGALGGLAGAQIGSGNGKLAATAGGAVLGLLVGGEIGRSFDAADAACAQYALEAGDTGRTVTWRDPDDGVGYRLTPTRTFRRGDG-YCREYTGTASVGGRIQRTYGTACRQPDGSWRLVN 213
BLAST of mRNA_P-wetherbeei_contig6016.1.1 vs. uniprot
Match: A0A1Y1Q2P6_9GAMM (17kDa_Anti_2 domain-containing protein n=1 Tax=Thiotrichaceae bacterium IS1 TaxID=1934244 RepID=A0A1Y1Q2P6_9GAMM) HSP 1 Score: 114 bits (286), Expect = 6.750e-30 Identity = 50/109 (45.87%), Postives = 71/109 (65.14%), Query Frame = 1
Query: 79 QIGDGNGRTAAIIGGTLIGAMFGSNIGRGMSPYDHSHAASVFEATPSNQTMAWQNPDYGTAYQVTPVRTFQANDGRYCREYQALATVGGRREQAYGTACRTPDGDWQIM 405
Q+G G GRTAAI+ GTL+GA+ G ++G + D + E TPS T+ W NP+ YQVTP +TFQ N+G++CR +Q +A V G++E GTACR +G WQ++
Sbjct: 47 QVGGGKGRTAAIVAGTLLGALIGGSVGATLDQIDQMKVSQALETTPSGYTVGWANPNTKIGYQVTPTQTFQDNNGQWCRNFQTVAVVEGQQETLQGTACRQTNGYWQLV 155
BLAST of mRNA_P-wetherbeei_contig6016.1.1 vs. uniprot
Match: A0A369TDE3_9PROT (Uncharacterized protein n=2 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369TDE3_9PROT) HSP 1 Score: 117 bits (294), Expect = 1.290e-29 Identity = 52/109 (47.71%), Postives = 68/109 (62.39%), Query Frame = 1
Query: 82 IGDGNGRTAAIIGGTLIGAMFGSNIGRGMSPYDHSHAASVFEATPSNQTMAWQNPDYGTAYQVTPVRTFQANDGRYCREYQALATVGGRREQAYGTACRTPDGDWQIMN 408
IG G+G+ A+ GG LIG + G +GR M D S E PS Q++ W+NPD+ Y+ P RT+Q GRYCREY ATV GR +Q YGTACR PDG W++++
Sbjct: 187 IGKGSGQLYAVAGGALIGVLAGGEVGRHMDRLDRSCVNQTLEHVPSGQSVVWRNPDFDARYEAIPQRTYQTAAGRYCREYITTATVAGRSQQVYGTACRQPDGSWELVD 295
BLAST of mRNA_P-wetherbeei_contig6016.1.1 vs. uniprot
Match: A0A367W0J5_9PROT (17 kDa surface antigen n=1 Tax=Thalassospira profundimaris TaxID=502049 RepID=A0A367W0J5_9PROT) HSP 1 Score: 114 bits (284), Expect = 4.220e-29 Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = 1
Query: 91 GNGRTAAIIGGTLIGAMFGSNIGRGMSPYDHSHAASVFEATPSNQTMAWQNPDYGTAYQVTPVRTFQANDGRYCREYQALATVGGRREQAYGTACRTPDGDWQIMN 408
G+GRTAAIIGG ++G + G NIG+ + D + + P +++ W NPD GT+Y V P R+++ +G YCREY A A +GG++ + YGTACR PDG W+I++
Sbjct: 93 GDGRTAAIIGGAILGMLGGYNIGQSLDQSDRACTGYTLQNVPDGRSVRWLNPDSGTSYNVVPTRSWENANGTYCREYSATADIGGKQAETYGTACRQPDGSWKIVS 198
BLAST of mRNA_P-wetherbeei_contig6016.1.1 vs. uniprot
Match: A0A1G8DKI1_9PROT (Surface antigen n=2 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G8DKI1_9PROT) HSP 1 Score: 112 bits (281), Expect = 4.540e-29 Identity = 64/134 (47.76%), Postives = 81/134 (60.45%), Query Frame = 1
Query: 13 GRQDSNLLGGLXXXXXXXXXXXQIGDGNGRTAAIIGGTLIGAMFGSNIGRGMSPYDHS---HAASVFEATPSNQTMAWQNPDYGTAYQVTPVRTFQANDGRYCREYQALATVGGRREQAYGTACRTPDGDWQIM 405
G+ D +G L XXXXXXQ G G GR AAI GGTL+GA GS G+ + D + +A P +T+AW NPD G + VTPVR + GRYCREY+ + V GR++ AYGTACR PDG W+I+
Sbjct: 28 GQGDKQTVGTLIGAAAXXXXXXQXGGGTGRYAAIAGGTLLGAWLGSEAGKSLDRADQAALENAQQEAHQAPVGETIAWNNPDSGHSGSVTPVRDGYSQSGRYCREYRTVIEVDGRQQDAYGTACRQPDGSWEII 161 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6016.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6016.1.1 >prot_P-wetherbeei_contig6016.1.1 ID=prot_P-wetherbeei_contig6016.1.1|Name=mRNA_P-wetherbeei_contig6016.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp YGGYGRQDSNLLGGLLGGAVGGIAGSQIGDGNGRTAAIIGGTLIGAMFGSback to top mRNA from alignment at P-wetherbeei_contig6016:630..1040+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6016.1.1 ID=mRNA_P-wetherbeei_contig6016.1.1|Name=mRNA_P-wetherbeei_contig6016.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig6016:630..1040+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6016:630..1040+ >mRNA_P-wetherbeei_contig6016.1.1 ID=mRNA_P-wetherbeei_contig6016.1.1|Name=mRNA_P-wetherbeei_contig6016.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig6016:630..1040+ (Phaeothamnion wetherbeei SAG_119_79)back to top |