prot_P-wetherbeei_contig6015.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig6015.1.1
Unique Name	prot_P-wetherbeei_contig6015.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	225

Homology

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BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: D7FQY7_ECTSI (Ubiquitin-conjugating enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY7_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 7.240e-84
Identity = 122/160 (76.25%), Postives = 140/160 (87.50%), Query Frame = 0

Query:   66 TSQAHLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLG-RDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 224
            T+ +HL+  YRPGN NYRIQKEL++FMANPPD C+VS+GKNIRVWIITI GA+GT+YAGEKFRLRV+FP EYP+KPP+VYFLQ P PP H HIYTNGDICLSLL  RDWKPNLTV SLALSILSMLSSAK++R+P+DNA HA  +PGQAQ  W+YHDD C
Sbjct:  159 TTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNATHAEARPGQAQ-QWIYHDDLC 317

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BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: A0A0G4GQN8_VITBC (UBC core domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GQN8_VITBC)

HSP 1 Score: 231 bits (590), Expect = 6.740e-74
Identity = 101/155 (65.16%), Postives = 128/155 (82.58%), Query Frame = 0

Query:   70 HLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 224
            HL  ++RPG+VNYRIQKEL+DF+  PPD+C +++G NIRVWIIT+ G +GT+Y GEK+RL++ FP EYP KPP +YFLQ    P HPH+Y+NGDICL+LLG DWKP LTV+S+ALSILSMLSSAK++++P DNA+HA +K G  Q NWMYHDD C
Sbjct:   54 HLRRSFRPGHVNYRIQKELKDFLTTPPDHCEIAVGSNIRVWIITLTGVEGTLYEGEKYRLKIVFPPEYPLKPPIIYFLQPT--PRHPHVYSNGDICLNLLGTDWKPTLTVASVALSILSMLSSAKEKKLPLDNASHADLKAGGQQHNWMYHDDKC 206

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BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: A0A835ZFF1_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFF1_9STRA)

HSP 1 Score: 235 bits (600), Expect = 3.150e-73
Identity = 104/153 (67.97%), Postives = 130/153 (84.97%), Query Frame = 0

Query:   70 HLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDD 222
            HL + +RPG+ NYRIQKEL++FM NPP+ C+VS+GK+++VWIITI GA GT++ GEKF+LRV FP  YP KPPSVYFLQ+P PP H H+YTNGDICLSLLG+DW PNLT S+LALSILSMLSSAK++R P DN  +A  +PGQ+QD+W+YHD+
Sbjct:  214 HLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLGKDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHDN 366

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BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: A0A0G4GVI6_9ALVE (UBC core domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GVI6_9ALVE)

HSP 1 Score: 224 bits (572), Expect = 3.190e-71
Identity = 107/173 (61.85%), Postives = 132/173 (76.30%), Query Frame = 0

Query:   52 GAAAGSKSTAGASSTSQAHLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 224
            G  +G K  A A+S    HL A + PGN NYRIQKEL++F+ +PP NCRVS+G N+R WIITI+G +GT+Y  E ++L+V FP EYP  PPSVYFL+    P HPH+YTNGDICL+LLG DWKP LTVS++AL+ILSMLSSAK++++P DNAAHA   PG  Q NWMYHDD C
Sbjct:   35 GKKSGGKKKADATSN---HLKAKWTPGNPNYRIQKELKEFIKSPPPNCRVSVGSNLRAWIITIKGVEGTLYEKETYKLKVVFPDEYPLVPPSVYFLRPA--PRHPHVYTNGDICLNLLGTDWKPTLTVSAIALAILSMLSSAKEKKIPLDNAAHAEAPPGGQQHNWMYHDDKC 202

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BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: W7U274_9STRA (Ubiquitin-conjugating enzyme n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U274_9STRA)

HSP 1 Score: 226 bits (576), Expect = 2.690e-70
Identity = 98/157 (62.42%), Postives = 128/157 (81.53%), Query Frame = 0

Query:   68 QAHLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 224
            Q HL   +R GN N+R+QKELR+++ANP +N +V++G NIRVW++T+ GA GT++AGEK++L+  FP +YPSKPPSVYFLQ P  P H H+YTNGDICL+LLGRDW+PN+T S LALSILSMLSSA+++++PQDN  HA   PG+ Q NW+YHDD C
Sbjct:  160 QKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVGDNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQPP--PRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314

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BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: A0A7S1TYR4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYR4_9STRA)

HSP 1 Score: 223 bits (568), Expect = 4.690e-70
Identity = 100/146 (68.49%), Postives = 122/146 (83.56%), Query Frame = 0

Query:   78 GNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDA 223
            GN  YRIQKELR+F+ NPP NC+VS+G NIRVW +T+ GA+ T+Y GE+++LRV FP  YP+KPPSVYFL+ P  P HPH+YTNGDICLSLLG+DW+PNLT SSLALSILSMLSSA+++R+P DNA HA   PG+ QD WMYHDD+
Sbjct:   98 GNPLYRIQKELREFVDNPPPNCKVSVGDNIRVWTVTLTGAEDTLYEGEEYKLRVTFPTGYPTKPPSVYFLKPP--PKHPHVYTNGDICLSLLGKDWRPNLTASSLALSILSMLSSAREKRLPNDNAQHADSPPGKPQDGWMYHDDS 241

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BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: A0A7S4RNY0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RNY0_9STRA)

HSP 1 Score: 216 bits (549), Expect = 8.500e-66
Identity = 98/157 (62.42%), Postives = 123/157 (78.34%), Query Frame = 0

Query:   68 QAHLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 224
            Q HL A  +  + NYRIQKELR F+ +PP N  V++GKNIRVWI+TI GA  T+Y GEK+RLR++FP+ YP+ PPSVYFL  P  P H H+YTNGDICLSLLG+DW+P +T  SLA+SILS+LSSA+++ +P DNAAH+  KPG  QDNW+YHDD C
Sbjct:  194 QKHLSAKLKSNSPNYRIQKELRAFLTSPPPNLSVAVGKNIRVWIVTITGASNTIYEGEKYRLRMSFPSNYPTSPPSVYFL--PPTPKHEHVYTNGDICLSLLGKDWRPTMTGQSLAVSILSLLSSAREKSLPMDNAAHSQNKPGGNQDNWIYHDDNC 348

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BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: B7FUS1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUS1_PHATC)

HSP 1 Score: 206 bits (525), Expect = 1.470e-64
Identity = 93/161 (57.76%), Postives = 124/161 (77.02%), Query Frame = 0

Query:   64 SSTSQAHLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 224
            S  + AHL A  +  + NYRIQ+EL+ F+++PP N  V +GKN+RVWI++I GA GTVY GE F+LR++FP +YP+ PPSVYFL  P  P+H H+YTNGDICLSLLG+DW+P +T  S+A+SILS+LSSA+ + +P DNA HA  KPG+ Q +W+YHDD C
Sbjct:   10 SPAADAHLQAKLKSTSPNYRIQRELKAFLSDPPSNLSVKVGKNLRVWIVSIEGAKGTVYEGEIFKLRISFPPQYPTVPPSVYFLP-PSIPVHEHVYTNGDICLSLLGKDWRPTMTAQSIAVSILSILSSAQSKSLPMDNARHAQNKPGEYQKDWVYHDDNC 169

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BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: A0A7S2L3M3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L3M3_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.950e-64
Identity = 96/155 (61.94%), Postives = 120/155 (77.42%), Query Frame = 0

Query:   70 HLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 224
            HL ++    N NYRIQ+EL+ F+ +PP+N  V +GKNIRVWIIT+ GA G++Y GEK+RL V FP  YP+ PPSVYFL     P H H+YTNGDICLSLLG+DW+P +T  S+ALSILS+LSSA  + +PQDNAAHAG +PG AQD+W+YHDD C
Sbjct:  199 HLKSSLSQNNPNYRIQQELKAFIKSPPENLSVKVGKNIRVWIITLTGATGSIYEGEKYRLHVKFPKNYPAAPPSVYFLNPT--PRHEHVYTNGDICLSLLGKDWRPTMTAQSIALSILSILSSASHKALPQDNAAHAGAQPGLAQDDWVYHDDNC 351

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BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: A0A7S4A863_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A863_9STRA)

HSP 1 Score: 211 bits (536), Expect = 3.260e-64
Identity = 92/142 (64.79%), Postives = 118/142 (83.10%), Query Frame = 0

Query:   83 RIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 224
            RI +EL DF+ NPPD C+VS+GKN+ VWI+T+ GA+GT++AGEK++LRV+FPA+YP+ PPS YFL EP P  HPH+YTNGDICL+LLG  W+P +TV+ L+LSILSMLSSAK + +PQDNA HA   PG+ Q+ WMYHDD+C
Sbjct:  179 RISRELTDFVENPPDGCKVSVGKNLNVWIVTMTGAEGTIFAGEKYKLRVSFPADYPTSPPSCYFL-EPTP-RHPHVYTNGDICLNLLGNGWRPTITVAQLSLSILSMLSSAKTKGIPQDNAVHAASAPGKPQEGWMYHDDSC 318

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQY7_ECTSI	7.240e-84	76.25	Ubiquitin-conjugating enzyme n=1 Tax=Ectocarpus si...	[more]
A0A0G4GQN8_VITBC	6.740e-74	65.16	UBC core domain-containing protein n=1 Tax=Vitrell...	[more]
A0A835ZFF1_9STRA	3.150e-73	67.97	Ubiquitin-conjugating enzyme/RWD-like protein n=1 ...	[more]
A0A0G4GVI6_9ALVE	3.190e-71	61.85	UBC core domain-containing protein n=1 Tax=Chromer...	[more]
W7U274_9STRA	2.690e-70	62.42	Ubiquitin-conjugating enzyme n=2 Tax=Monodopsidace...	[more]
A0A7S1TYR4_9STRA	4.690e-70	68.49	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7S4RNY0_9STRA	8.500e-66	62.42	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
B7FUS1_PHATC	1.470e-64	57.76	Predicted protein n=1 Tax=Phaeodactylum tricornutu...	[more]
A0A7S2L3M3_9STRA	2.950e-64	61.94	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A7S4A863_9STRA	3.260e-64	64.79	Hypothetical protein n=2 Tax=Pelagomonas calceolat...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 82..218 e-value: 4.2E-32 score: 122.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..70
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 45..224
None	No IPR available	PANTHER	PTHR24068:SF148	UBIQUITIN-CONJUGATING ENZYME E2	coord: 45..224
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 79..224 e-value: 5.2E-41 score: 141.7
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 63..204
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 83..206 e-value: 2.5E-30 score: 105.0
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 79..224 score: 37.817532
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 83..192 e-value: 9.00672E-38 score: 126.548
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 154..169

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig6015	contig	P-wetherbeei_contig6015:518..1594 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig6015.1.1	mRNA_P-wetherbeei_contig6015.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig6015 262..1674 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig6015.1.1 ID=prot_P-wetherbeei_contig6015.1.1|Name=mRNA_P-wetherbeei_contig6015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=225bp
MDLARPTKGLVRRVGAFLKSLGHALLGSSFEEDSDAKSGAKVGKKGPEAK
AGAAAGSKSTAGASSTSQAHLDAAYRPGNVNYRIQKELRDFMANPPDNCR
VSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEP
RPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQ
DNAAHAGMKPGQAQDNWMYHDDAC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016135	UBQ-conjugating_enzyme/RWD
IPR000608	UBQ-conjugat_E2
IPR023313	UBQ-conjugating_AS