mRNA_P-wetherbeei_contig6015.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: D7FQY7_ECTSI (Ubiquitin-conjugating enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY7_ECTSI) HSP 1 Score: 265 bits (676), Expect = 1.210e-83 Identity = 145/250 (58.00%), Postives = 179/250 (71.60%), Query Frame = 3
Query: 15 FVQIFAPSFGQEEAGEEGAEEEMDLARPTKGLVRRVGAFLKSLGHALLGSSF---EEDSDAKSGAKVGKKGPEAKAGAAAGSKSTAGASSTSQAHLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLG-RDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 752
F+++ P F +++ G+ E+DL GL+RR+ + + + GS E +AK+ A K +AK GA++TS HL+ YRPGN NYRIQKEL++FMANPPD C+VS+GKNIRVWIITI GA+GT+YAGEKFRLRV+FP EYP+KPP+VYFLQ P PP H HIYTNGDICLSLL RDWKPNLTV SLALSILSMLSSAK++R+P+DNA HA +PGQAQ W+YHDD C
Sbjct: 88 FMRVLMPGFRRDKGGDG----ELDLEGG--GLMRRLKRLVSGVFRKVRGSPVPITEPKGEAKNVATKKKSKGKAK-----------GATTTS--HLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNATHAEARPGQAQQ-WIYHDDLC 317
BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: A0A835ZFF1_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFF1_9STRA) HSP 1 Score: 253 bits (647), Expect = 1.350e-78 Identity = 131/249 (52.61%), Postives = 169/249 (67.87%), Query Frame = 3
Query: 6 FQSFVQIFAPSFGQEEAGEEGAEEEMDLARPTKGLVRRVGAFLKSLGHALLGSSFEEDSDAKSGAKVGKKGPEAKAGAAAGSKSTAGASS--TSQAHLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDD 746
FQ F+QIF P +G++ AG++G + + L GL +RV FL +L G + AK G K G+S T HL + +RPG+ NYRIQKEL++FM NPP+ C+VS+GK+++VWIITI GA GT++ GEKF+LRV FP YP KPPSVYFLQ+P PP H H+YTNGDICLSLLG+DW PNLT S+LALSILSMLSSAK++R P DN +A +PGQ+QD+W+YHD+
Sbjct: 140 FQLFMQIFIPGYGEDAAGDDG-DGKAALTSAQPGLAKRVKRFLSAL---FSGGKKQPTKGAKGG------------------KGKGGSSKDDTVGKHLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLGKDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHDN 366
BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: A0A0G4GQN8_VITBC (UBC core domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GQN8_VITBC) HSP 1 Score: 232 bits (592), Expect = 1.590e-72 Identity = 101/155 (65.16%), Postives = 128/155 (82.58%), Query Frame = 3
Query: 288 HLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 752
HL ++RPG+VNYRIQKEL+DF+ PPD+C +++G NIRVWIIT+ G +GT+Y GEK+RL++ FP EYP KPP +YFLQ P HPH+Y+NGDICL+LLG DWKP LTV+S+ALSILSMLSSAK++++P DNA+HA +K G Q NWMYHDD C
Sbjct: 54 HLRRSFRPGHVNYRIQKELKDFLTTPPDHCEIAVGSNIRVWIITLTGVEGTLYEGEKYRLKIVFPPEYPLKPPIIYFLQPT--PRHPHVYSNGDICLNLLGTDWKPTLTVASVALSILSMLSSAKEKKLPLDNASHADLKAGGQQHNWMYHDDKC 206
BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: A0A0G4GVI6_9ALVE (UBC core domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GVI6_9ALVE) HSP 1 Score: 225 bits (574), Expect = 7.290e-70 Identity = 107/173 (61.85%), Postives = 132/173 (76.30%), Query Frame = 3
Query: 234 GAAAGSKSTAGASSTSQAHLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 752
G +G K A A+S HL A + PGN NYRIQKEL++F+ +PP NCRVS+G N+R WIITI+G +GT+Y E ++L+V FP EYP PPSVYFL+ P HPH+YTNGDICL+LLG DWKP LTVS++AL+ILSMLSSAK++++P DNAAHA PG Q NWMYHDD C
Sbjct: 35 GKKSGGKKKADATSN---HLKAKWTPGNPNYRIQKELKEFIKSPPPNCRVSVGSNLRAWIITIKGVEGTLYEKETYKLKVVFPDEYPLVPPSVYFLRPA--PRHPHVYTNGDICLNLLGTDWKPTLTVSAIALAILSMLSSAKEKKIPLDNAAHAEAPPGGQQHNWMYHDDKC 202
BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: W7U274_9STRA (Ubiquitin-conjugating enzyme n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U274_9STRA) HSP 1 Score: 227 bits (578), Expect = 6.220e-69 Identity = 98/157 (62.42%), Postives = 128/157 (81.53%), Query Frame = 3
Query: 282 QAHLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 752
Q HL +R GN N+R+QKELR+++ANP +N +V++G NIRVW++T+ GA GT++AGEK++L+ FP +YPSKPPSVYFLQ P P H H+YTNGDICL+LLGRDW+PN+T S LALSILSMLSSA+++++PQDN HA PG+ Q NW+YHDD C
Sbjct: 160 QKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVGDNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQPP--PRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314
BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: A0A7S1TYR4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYR4_9STRA) HSP 1 Score: 224 bits (570), Expect = 1.070e-68 Identity = 100/147 (68.03%), Postives = 122/147 (82.99%), Query Frame = 3
Query: 312 GNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 752
GN YRIQKELR+F+ NPP NC+VS+G NIRVW +T+ GA+ T+Y GE+++LRV FP YP+KPPSVYFL+ P P HPH+YTNGDICLSLLG+DW+PNLT SSLALSILSMLSSA+++R+P DNA HA PG+ QD WMYHDD+
Sbjct: 98 GNPLYRIQKELREFVDNPPPNCKVSVGDNIRVWTVTLTGAEDTLYEGEEYKLRVTFPTGYPTKPPSVYFLKPP--PKHPHVYTNGDICLSLLGKDWRPNLTASSLALSILSMLSSAREKRLPNDNAQHADSPPGKPQDGWMYHDDSA 242
BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: A0A7S4RNY0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RNY0_9STRA) HSP 1 Score: 216 bits (551), Expect = 1.870e-64 Identity = 98/157 (62.42%), Postives = 123/157 (78.34%), Query Frame = 3
Query: 282 QAHLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 752
Q HL A + + NYRIQKELR F+ +PP N V++GKNIRVWI+TI GA T+Y GEK+RLR++FP+ YP+ PPSVYFL P P H H+YTNGDICLSLLG+DW+P +T SLA+SILS+LSSA+++ +P DNAAH+ KPG QDNW+YHDD C
Sbjct: 194 QKHLSAKLKSNSPNYRIQKELRAFLTSPPPNLSVAVGKNIRVWIVTITGASNTIYEGEKYRLRMSFPSNYPTSPPSVYFL--PPTPKHEHVYTNGDICLSLLGKDWRPTMTGQSLAVSILSLLSSAREKSLPMDNAAHSQNKPGGNQDNWIYHDDNC 348
BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: B7FUS1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUS1_PHATC) HSP 1 Score: 207 bits (527), Expect = 3.040e-63 Identity = 93/161 (57.76%), Postives = 124/161 (77.02%), Query Frame = 3
Query: 270 SSTSQAHLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 752
S + AHL A + + NYRIQ+EL+ F+++PP N V +GKN+RVWI++I GA GTVY GE F+LR++FP +YP+ PPSVYFL P P+H H+YTNGDICLSLLG+DW+P +T S+A+SILS+LSSA+ + +P DNA HA KPG+ Q +W+YHDD C
Sbjct: 10 SPAADAHLQAKLKSTSPNYRIQRELKAFLSDPPSNLSVKVGKNLRVWIVSIEGAKGTVYEGEIFKLRISFPPQYPTVPPSVYFLP-PSIPVHEHVYTNGDICLSLLGKDWRPTMTAQSIAVSILSILSSAQSKSLPMDNARHAQNKPGEYQKDWVYHDDNC 169
BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: A0A7S2L3M3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L3M3_9STRA) HSP 1 Score: 213 bits (541), Expect = 6.350e-63 Identity = 96/155 (61.94%), Postives = 120/155 (77.42%), Query Frame = 3
Query: 288 HLDAAYRPGNVNYRIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 752
HL ++ N NYRIQ+EL+ F+ +PP+N V +GKNIRVWIIT+ GA G++Y GEK+RL V FP YP+ PPSVYFL P H H+YTNGDICLSLLG+DW+P +T S+ALSILS+LSSA + +PQDNAAHAG +PG AQD+W+YHDD C
Sbjct: 199 HLKSSLSQNNPNYRIQQELKAFIKSPPENLSVKVGKNIRVWIITLTGATGSIYEGEKYRLHVKFPKNYPAAPPSVYFLNPT--PRHEHVYTNGDICLSLLGKDWRPTMTAQSIALSILSILSSASHKALPQDNAAHAGAQPGLAQDDWVYHDDNC 351
BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Match: A0A7S4A863_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A863_9STRA) HSP 1 Score: 211 bits (538), Expect = 6.960e-63 Identity = 92/142 (64.79%), Postives = 118/142 (83.10%), Query Frame = 3
Query: 327 RIQKELRDFMANPPDNCRVSIGKNIRVWIITIRGADGTVYAGEKFRLRVAFPAEYPSKPPSVYFLQEPRPPLHPHIYTNGDICLSLLGRDWKPNLTVSSLALSILSMLSSAKDRRVPQDNAAHAGMKPGQAQDNWMYHDDAC 752
RI +EL DF+ NPPD C+VS+GKN+ VWI+T+ GA+GT++AGEK++LRV+FPA+YP+ PPS YFL EP P HPH+YTNGDICL+LLG W+P +TV+ L+LSILSMLSSAK + +PQDNA HA PG+ Q+ WMYHDD+C
Sbjct: 179 RISRELTDFVENPPDGCKVSVGKNLNVWIVTMTGAEGTIFAGEKYKLRVSFPADYPTSPPSCYFL-EPTP-RHPHVYTNGDICLNLLGNGWRPTITVAQLSLSILSMLSSAKTKGIPQDNAVHAASAPGKPQEGWMYHDDSC 318 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6015.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6015.1.1 >prot_P-wetherbeei_contig6015.1.1 ID=prot_P-wetherbeei_contig6015.1.1|Name=mRNA_P-wetherbeei_contig6015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=225bp MDLARPTKGLVRRVGAFLKSLGHALLGSSFEEDSDAKSGAKVGKKGPEAKback to top mRNA from alignment at P-wetherbeei_contig6015:262..1674- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6015.1.1 ID=mRNA_P-wetherbeei_contig6015.1.1|Name=mRNA_P-wetherbeei_contig6015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1413bp|location=Sequence derived from alignment at P-wetherbeei_contig6015:262..1674- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6015:262..1674- >mRNA_P-wetherbeei_contig6015.1.1 ID=mRNA_P-wetherbeei_contig6015.1.1|Name=mRNA_P-wetherbeei_contig6015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=675bp|location=Sequence derived from alignment at P-wetherbeei_contig6015:262..1674- (Phaeothamnion wetherbeei SAG_119_79)back to top |