mRNA_P-wetherbeei_contig6009.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6009.1.1 vs. uniprot
Match: D8LQ23_ECTSI (Exostosin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ23_ECTSI) HSP 1 Score: 107 bits (268), Expect = 4.740e-22 Identity = 106/357 (29.69%), Postives = 151/357 (42.30%), Query Frame = 1
Query: 1 RSVTFFFAGSMRHRPERANLAVLQNAVEGACIQVAKSSHV----TRRYVGQITSARFCLVPRGDTPSSRRLFDAVAAGCIPVVPEVLRREDDLPFAD-AIPYERFAAFVPDADFESREAIAAMARRLLAWPAARLDAMHAELMRHRDRLVVARRSGDNASFAELAPSPGLAEEFLRAAARLAAPDRR---------WSCRPSDDGPFNARTAARVAAAVFPAEGAGRRDEWFGGGAATVVNFGRRLLLCDVPGAGTAPLAPFFLQ----PPLVAADGVYRGSGRFAAGFAVAEEGAAAXXXXXRAPAATAGMVARTLPVDDGAAMAEIY---GLGWVRAVVARDPMTRLLAIFLALS 1008
R + FFF G+ R RPER NL V+ EG+ + + + +Y I +RFC PRGDT SSRR+FDAVAAGC P+V E LPF++ + Y FA V F +RE + + + L+ A ++ + R L+ G ++ P G A +F+RA+ LA W+C D A R A + P GA R +W T+VN R LL C P G+ + P ++ R A+G + L DG M EIY G GW++ + RDP+TRLL+ +L L+
Sbjct: 341 RDIPFFFVGTARGRPERQNLDVVTGMAEGSVMMLGDHQSDWGMNSTQYAAHIARSRFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAV--LPFSEHVLNYSDFAVVVDPDAFTTRERVTKVVQDALSRSEAEVEQLREGGRRGISALLYGVTMGKE--IGDMRPFLGTATKFVRASYALAGGGGTEGEGRSADMWTCNRYDPKGEEVDAAPRTTAKLPPPAGATR--QWLAE-TETIVNEERSLLFCAPPNTGSLQFRMLAKRMQGLPHWAVSNDRSLVFDREASGLEL-------------------------LDATDGHLMEEIYQENGSGWIKIGLVRDPVTRLLSAYLDLA 665
BLAST of mRNA_P-wetherbeei_contig6009.1.1 vs. uniprot
Match: A0A6H5KWD0_9PHAE (Exostosin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWD0_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 1.290e-18 Identity = 62/176 (35.23%), Postives = 92/176 (52.27%), Query Frame = 1
Query: 1 RSVTFFFAGSMRHRPERANLAVLQNAVEGACIQVAKSSHV----TRRYVGQITSARFCLVPRGDTPSSRRLFDAVAAGCIPVVPEVLRREDDLPFAD-AIPYERFAAFVPDADFESREAIAAMARRLLAWPAARLDAMHAELMRHRDRLVVARRSGDNASFAELAPSPGLAEEFLR 513
R + FFF G+ RHRPER NL V+ + +G+ + + + + Y + +RFC PRGDT SSRRLFDA+AAGC P+V E LPF+ A+ Y FA V A F +RE++ + R +L+ + L+ + R + L+ G S ++ P G A F +
Sbjct: 135 RDIPFFFVGTARHRPERKNLDVVADIAKGSVVILDDLAWEWGMNSTEYAEHMARSRFCFSPRGDTESSRRLFDAIAAGCTPIVTEATVAV--LPFSQTALNYSDFAVVVDSAGFRTRESVKGIVREVLSRTSVELEELQESARRAANGLLYGITEGPELS--DVRPYFGTATNFAK 306
BLAST of mRNA_P-wetherbeei_contig6009.1.1 vs. uniprot
Match: A0A6H5LR87_9PHAE (Exostosin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LR87_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 1.400e-12 Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 1
Query: 1 RSVTFFFAGSMRHRPERANLAVLQNAVEGACIQV----AKSSHVTRRYVGQITSARFCLVPRGDTPSSRRLFDAVAAGCIPVVPE 243
R + FFF G+ R RPER NL V+ + +G+ + + ++ + +Y + +RFC PRGDT SSRRLFDA+AAGC P+V E
Sbjct: 144 RDIPFFFVGTARGRPERENLDVVADIAKGSVVILDNLPSRWGMNSTQYAEHMARSRFCFSPRGDTESSRRLFDAIAAGCTPIVTE 228
BLAST of mRNA_P-wetherbeei_contig6009.1.1 vs. uniprot
Match: A0A6H5JMN7_9PHAE (Exostosin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMN7_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 1.060e-11 Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 1
Query: 1 RSVTFFFAGSMRHRPERANLAVLQNAVEGACIQV----AKSSHVTRRYVGQITSARFCLVPRGDTPSSRRLFDAVAAGCIPVVPE 243
R + FFF G+ R RPER NL V+ + +G+ + + ++ + +Y + +RFC PRGDT SSRRLFDA+AAGC P+V E
Sbjct: 107 RDIPFFFVGTARGRPERENLDVVADIAKGSVVILDNLPSRWGMNSTQYAEHMARSRFCFSPRGDTESSRRLFDAIAAGCTPIVTE 191
BLAST of mRNA_P-wetherbeei_contig6009.1.1 vs. uniprot
Match: A0A7S0LSU7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LSU7_9EUKA) HSP 1 Score: 66.6 bits (161), Expect = 4.480e-10 Identity = 31/75 (41.33%), Postives = 47/75 (62.67%), Query Frame = 1
Query: 124 RRYVGQITSARFCLVPRGDTPSSRRLFDAVAAGCIPVVPEVLRREDDLPFADAIPYERFAAFVPDADFESREAIA 348
+++ + S++FCL RGD+P SRR F+ +AAGC+PVV L PF +PY F F+P+ADF + ++A
Sbjct: 37 QQFADTLLSSQFCLHIRGDSPGSRRFFEILAAGCLPVVVADLWLNTSAPFTAEVPYCDFVVFIPEADFVANASLA 111
BLAST of mRNA_P-wetherbeei_contig6009.1.1 vs. uniprot
Match: A0A1Y1IG28_KLENI (Exostosin domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IG28_KLENI) HSP 1 Score: 68.2 bits (165), Expect = 5.740e-9 Identity = 42/109 (38.53%), Postives = 59/109 (54.13%), Query Frame = 1
Query: 1 RSVTFFFAGSMRHRPE---RANLAVLQNAVEGACIQVAKSSHV-TRRYVGQITSARFCLVPRGDTPSSRRLFDAVAAGCIPVVPEVLRREDDLPFADAIPYERFAAFVP 315
R FF G ++ + R L + G +Q + S V ++ +RFCL+P GDTPSS RLFDA+A+ C+PVV + + +LPF D + Y RFA FVP
Sbjct: 347 RKSLLFFQGQLQRKAGGAVRQELLGVLGRETGVVMQPGRPSSVGVADAATRMRDSRFCLMPAGDTPSSCRLFDAIASHCVPVV---VSDQLELPFEDVLDYTRFAIFVP 452
BLAST of mRNA_P-wetherbeei_contig6009.1.1 vs. uniprot
Match: A0A7S3WY46_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WY46_9SPIT) HSP 1 Score: 65.5 bits (158), Expect = 1.750e-8 Identity = 55/177 (31.07%), Postives = 88/177 (49.72%), Query Frame = 1
Query: 1 RSVTFFFAG----------SMRHRPERANLAVLQNAVEGACIQVAKSSHVTRRYVGQITSARFCLVPRGDTPSSRRLFDAVAAGCIPVVPEVLRREDDLPFADAIPYERFAAFVPDADFESREAIAAMARRLLAWPAARLDAMHAELMRHRDRLV----VARRSGDNASFAELAPSP 489
RS+ FF G S+R R +A + +E + Q Y+ ++ SA+FCL PRGDT SS+R ++++AAGCIPV+ + + LPF+ + ++ F+ + + E+ A+ +RL P AR+ AM A L R R + +RRS +A E+ P
Sbjct: 107 RSLLLFFRGHLPKGYIESASIRRRMLQALRGLPGVLIEASTSQPGAVYEPHSLYLKKMLSAKFCLTPRGDTSSSKRTYESIAAGCIPVI---IADDLRLPFSRKLNWDSFSIRISEK--EALRDPPAIVQRLHNLPPARVVAMQAALARARPNFLWHLDPSRRSAVDAILEEICDGP 278
BLAST of mRNA_P-wetherbeei_contig6009.1.1 vs. uniprot
Match: A0A7I8J4L1_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8J4L1_SPIIN) HSP 1 Score: 65.5 bits (158), Expect = 2.340e-8 Identity = 32/61 (52.46%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 142 ITSARFCLVPRGDTPSSRRLFDAVAAGCIPVVPEVLRREDDLPFADAIPYERFAAFVPDAD 324
+ +ARFCL GDTPSS RLFDA+A C+PVV + + +LPF D + Y F FVP AD
Sbjct: 172 MATARFCLTIAGDTPSSNRLFDAIARRCVPVV---ISNDLELPFEDVLDYAEFCVFVPAAD 229
BLAST of mRNA_P-wetherbeei_contig6009.1.1 vs. uniprot
Match: A0A822Z086_NELNU (Exostosin domain-containing protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822Z086_NELNU) HSP 1 Score: 63.2 bits (152), Expect = 4.100e-8 Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 133 VGQ-ITSARFCLVPRGDTPSSRRLFDAVAAGCIPVVPEVLRREDDLPFADAIPYERFAAFVPDAD 324
VGQ +TS++FCL GDTPSS RLFDA+A+ C+PV+ + E +LP+ D + Y F FV ++D
Sbjct: 60 VGQGMTSSKFCLNIAGDTPSSNRLFDAIASHCVPVI---ISDEIELPYEDVLDYSEFCIFVRESD 121
BLAST of mRNA_P-wetherbeei_contig6009.1.1 vs. uniprot
Match: A0A7R9YJK9_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YJK9_DIALT) HSP 1 Score: 64.3 bits (155), Expect = 4.160e-8 Identity = 40/85 (47.06%), Postives = 48/85 (56.47%), Query Frame = 1
Query: 67 LQNAVEGACIQVAKSSHVTRRYVGQITSARFCLVPRGDTPSSRRLFDAVAAGCIPVVPEVLRREDDLPFADAI--PYERFAAFVP 315
L A EG V + T Y +I SA+FCLVPRGDT +SRR +DAV AGCIP+V L LPF + + YER VP
Sbjct: 159 LLKATEG----VPREGRSTAEYAAEIQSAQFCLVPRGDTLTSRRFYDAVLAGCIPIV---LSDGMPLPFREELHAQYERAVVSVP 236 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6009.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6009.1.1 >prot_P-wetherbeei_contig6009.1.1 ID=prot_P-wetherbeei_contig6009.1.1|Name=mRNA_P-wetherbeei_contig6009.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=326bp MRHRPERANLAVLQNAVEGACIQVAKSSHVTRRYVGQITSARFCLVPRGDback to top mRNA from alignment at P-wetherbeei_contig6009:124..1524+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6009.1.1 ID=mRNA_P-wetherbeei_contig6009.1.1|Name=mRNA_P-wetherbeei_contig6009.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1401bp|location=Sequence derived from alignment at P-wetherbeei_contig6009:124..1524+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6009:124..1524+ >mRNA_P-wetherbeei_contig6009.1.1 ID=mRNA_P-wetherbeei_contig6009.1.1|Name=mRNA_P-wetherbeei_contig6009.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=978bp|location=Sequence derived from alignment at P-wetherbeei_contig6009:124..1524+ (Phaeothamnion wetherbeei SAG_119_79)back to top |