prot_P-wetherbeei_contig6003.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6003.2.1
Unique Nameprot_P-wetherbeei_contig6003.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length178
Homology
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A6H5K552_9PHAE (Condensin complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K552_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 5.840e-27
Identity = 70/153 (45.75%), Postives = 90/153 (58.82%), Query Frame = 0
Query:   43 GALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRIN--LAPTAA-------EAASGCKSHG--------------GDGGTDGGIRQSSASLPPSG--ELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGREDLTDLSIAADP 170
            G L+  R VEKI + YA +AKRVDVRRLK D+W++IN  L   AA       E   G ++                 DGG  G         P  G  ++ FS++V D+++ EEQ  VT+PFYFICLLHLANEKGL+LEGR+DL D S+A+DP
Sbjct:  212 GLLAAGRRVEKISVNYAKKAKRVDVRRLKGDLWQKINTKLQSDAAVVDVYRDEGGGGAENRSEEEVENKDVESKSPADGGDKGKEEAEDVVKPAPGVVDMTFSNIVCDVASKEEQTGVTVPFYFICLLHLANEKGLKLEGRDDLLDFSVASDP 364          
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: D8LD70_ECTSI (Condensin complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD70_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.040e-24
Identity = 69/156 (44.23%), Postives = 92/156 (58.97%), Query Frame = 0
Query:   43 GALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRINL---APTAAEAASGCKSHGG----------------------DGGTDGGIRQSSASLPPSGE---LNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGREDLTDLSIAADP 170
            G L+  R VEKI + YA +AKRVDVRRLK D+W++IN    +  A     G +  GG                      DGG D G  ++   + P+ E   + FS++V D+++ EEQ  VT+ FYFICLLHLANEKGL+LEGR+DL D S+A+DP
Sbjct:  679 GLLAAGRRVEKISVNYAKKAKRVDVRRLKGDLWRKINTEFQSDAAVVDVDGGEGGGGAENPSEGEEEVENKDVESKSPADGG-DKGEEEAEDVVKPAPEVVDMTFSNIVCDVASKEEQTGVTVSFYFICLLHLANEKGLKLEGRDDLLDFSVASDP 833          
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A835Z1S3_9STRA (Condensin complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S3_9STRA)

HSP 1 Score: 100 bits (249), Expect = 2.340e-21
Identity = 64/149 (42.95%), Postives = 83/149 (55.70%), Query Frame = 0
Query:   33 VDDDSYIAAFGALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRIN-------------LAPTAAEAASGCKSHGGDGGTDGGIRQSSASLPPSGELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGREDLTDLSIAA 168
            +DDD   A    L   R VEK+++KYATRAK+VDVRRLK ++W+ I+             L    A   S            GG  Q     P    L FS V++++S+ E+Q  VT+ +YFICLLHLANEKGLRLEG++DL D  I A
Sbjct:  698 IDDDFDSAKL--LKADRVVEKVEVKYATRAKKVDVRRLKHNLWQHIDAVVPPPLPHGVSPLRTAPATPQSAAXXXXXXXXXTGGAAQ-----PEPEPLLFSSVLDEVSSKEDQSGVTVSYYFICLLHLANEKGLRLEGQDDLMDFGIGA 839          
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: B7G0X0_PHATC (Condensin complex subunit 2 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G0X0_PHATC)

HSP 1 Score: 100 bits (249), Expect = 2.370e-21
Identity = 68/144 (47.22%), Postives = 83/144 (57.64%), Query Frame = 0
Query:   34 DDDSYIAAFGALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRINLAPTAAEAAS--GCKSHGGDGGTDGGIRQSSASLP--PSGELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGREDLTDLSIAADPGAV 173
            DD S++A    L  +R V+K+ + YAT AK+VDV+RLKKD+W  I L    AE A     K H  D   D  +  S A  P  PS  L+F   V+DL A + Q  VTLPFYFIC+LHLANEKGLRL+    L D  I  D   V
Sbjct:  785 DDMSFVAP---LEDIRKVDKVHVGYATVAKKVDVKRLKKDLW--IELEAKLAEPAKLGEHKDHDAD---DSSMSLSDAVTPSKPSLPLSFQKAVQDLEATKTQADVTLPFYFICILHLANEKGLRLDSH-GLEDFGIVYDAAGV 919          
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A7S1XKV0_9STRA (Condensin complex subunit 2 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKV0_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.570e-20
Identity = 64/132 (48.48%), Postives = 78/132 (59.09%), Query Frame = 0
Query:   45 LSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRINL-APTAAEAASGCKSHGGDGGTDGGIRQSSASLP-----PSGELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEG--REDLTDLSIAA 168
            L   + VEK DI YA  AKRVDVRRLKK++W ++ + A   AE A        +     G  +S A+       PSG L+F  VV D++  E Q  VT+PFYFICLLHLANEKGL+LE   R DLTD  I A
Sbjct:  370 LVNPKKVEKPDINYAKAAKRVDVRRLKKELWTKVEVDAAAEAENADPESPAAAEDSLPMGKTRSEAAAAAEAGDPSGGLSFQHVVRDMAKGEAQTGVTVPFYFICLLHLANEKGLKLENPNRADLTDFRIHA 501          
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A7S1ZPC0_TRICV (Condensin complex subunit 2 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZPC0_TRICV)

HSP 1 Score: 94.0 bits (232), Expect = 1.670e-19
Identity = 62/158 (39.24%), Postives = 88/158 (55.70%), Query Frame = 0
Query:   27 GPGGDAVDDDSYIA----AFGALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRINLAPTAAEAASGCKSHGGDGGTDGGIRQSSASLPPSGELN---FSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGR-EDLTDLSIAADPGAVAAV 176
            GP  D  DD ++ A        + GVR VEKI + YAT AK+VDV+RLKKD+W  +  A T  ++     ++             S ++P   E N   F + V +L + + Q  VT+PFYFIC+LHLANEKGL+L+     LTD +I+ D G+  +V
Sbjct:  229 GPAFDGNDDGNFAAMDDFVIEDIEGVRKVEKIQVGYATVAKKVDVKRLKKDLWTEVE-AKTKTDSTIIADTN-----------NKSQTIPGPREKNQISFQETVMELESSQSQTEVTVPFYFICILHLANEKGLKLDSTGTGLTDFTISRDDGSAPSV 374          
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A7S2YQ64_9STRA (Condensin complex subunit 2 n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YQ64_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.060e-18
Identity = 50/118 (42.37%), Postives = 68/118 (57.63%), Query Frame = 0
Query:   43 GALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRINLAPTAAEAASGCKSHGGDGGTDGGIRQSSASLP--PSGELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGR 158
            G    VR VEK+ + YAT AK+VDV+RLK+D+W  I     A E  S  +    +   D     +    P   +G L+F D V+++   ++Q  V+LP+YFIC LHLANEKGL LE R
Sbjct:    4 GDFEDVRKVEKLSVGYATVAKKVDVKRLKQDLWTEIESVMVAPEEKSSVEEDTKEDSMDVPDEITPVKTPCKSTGPLSFYDTVQEMERNKKQADVSLPYYFICQLHLANEKGLYLESR 121          
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A7S4HYK3_9STRA (Condensin complex subunit 2 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HYK3_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 5.310e-18
Identity = 58/151 (38.41%), Postives = 84/151 (55.63%), Query Frame = 0
Query:   34 DDDSYIAAFGALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRIN----LAPTAAEAAS-------GCKSHGGDGGTDGGIRQSSASLPPSGELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGR-EDLTDLSIAADPGA 172
            D D Y+     + G+R VEKI I YA  AK+VDV+RLKKD+W  I+    + P   +A           + +  +  T   + QS+       +++F + V +L A + Q  VT+PFYFIC+LHLANEKGL+L+    +L D  I+ D GA
Sbjct:  758 DADDYVVE--DIEGIRKVEKIQIGYAAVAKKVDVKRLKKDLWNHIDSSSEVEPKVVQAPVENTEVYVSAEENSKEHNTLDDVEQSNEPR----QISFKETVNELEASQSQSEVTVPFYFICILHLANEKGLKLDSTGHNLIDFVISRDDGA 902          
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A7S4RKC8_9STRA (Condensin complex subunit 2 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RKC8_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.020e-17
Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = 0
Query:   33 VDDDSYIAAFGALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRINLAPTAAEAASGCKSHGGDGGTDGGI-RQSSASLPPSGELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGR-EDLTDLSIAADPGA 172
            V DD  + +   L G+R VEK+++ YAT AK+VDVR+LKK++W  ++     A+ ASG K+H         +  +   ++  +  ++F D V ++   + Q  VT+ +YFICLLHLANEKGLRL+   + L D  +  D G+
Sbjct:   74 VMDDDIVES---LDGIRKVEKVEVGYATVAKKVDVRKLKKELWAELD-----AKIASG-KAHEDKNDVSEMVPNEEFEAVAKTQPVSFQDTVREMDTTQSQVDVTIAYYFICLLHLANEKGLRLDSLGQSLDDFIVYRDDGS 206          
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A1Z5JDY9_FISSO (Condensin complex subunit 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDY9_FISSO)

HSP 1 Score: 88.6 bits (218), Expect = 3.270e-17
Identity = 51/111 (45.95%), Postives = 71/111 (63.96%), Query Frame = 0
Query:   45 LSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRINLAPTAAEAASGCKSHGGDGGTDGGIRQSSASLPPSGELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRL 155
            L GVR VEK+ + YAT AK+VDV++LK D+WK +    +  +      +  GD   D    ++ A  PP+  L+F + V+++ A + Q  VTLPFYFIC+LHLANEKGLRL
Sbjct:  652 LEGVRKVEKVQVGYATIAKKVDVKKLKTDLWKELESKFSVTKKDD--DTIDGDRSED----ETMAEQPPT-VLSFKEAVQNMEATKSQSDVTLPFYFICILHLANEKGLRL 755          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K552_9PHAE5.840e-2745.75Condensin complex subunit 2 n=1 Tax=Ectocarpus sp.... [more]
D8LD70_ECTSI1.040e-2444.23Condensin complex subunit 2 n=1 Tax=Ectocarpus sil... [more]
A0A835Z1S3_9STRA2.340e-2142.95Condensin complex subunit 2 n=1 Tax=Tribonema minu... [more]
B7G0X0_PHATC2.370e-2147.22Condensin complex subunit 2 n=1 Tax=Phaeodactylum ... [more]
A0A7S1XKV0_9STRA1.570e-2048.48Condensin complex subunit 2 n=1 Tax=Phaeomonas par... [more]
A0A7S1ZPC0_TRICV1.670e-1939.24Condensin complex subunit 2 (Fragment) n=1 Tax=Tri... [more]
A0A7S2YQ64_9STRA2.060e-1842.37Condensin complex subunit 2 n=1 Tax=Amphiprora pal... [more]
A0A7S4HYK3_9STRA5.310e-1838.41Condensin complex subunit 2 n=1 Tax=Odontella auri... [more]
A0A7S4RKC8_9STRA1.020e-1738.03Condensin complex subunit 2 n=1 Tax=Ditylum bright... [more]
A0A1Z5JDY9_FISSO3.270e-1745.95Condensin complex subunit 2 n=2 Tax=Fistulifera so... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022816Condensin complex subunit 2/barrenPFAMPF05786Cnd2coord: 46..167
e-value: 1.3E-25
score: 90.3
IPR022816Condensin complex subunit 2/barrenPANTHERPTHR13108CONDENSIN COMPLEX SUBUNIT 2coord: 48..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..110
NoneNo IPR availablePANTHERPTHR13108:SF9CONDENSIN COMPLEX SUBUNIT 2coord: 48..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6003contigP-wetherbeei_contig6003:2285..3450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6003.2.1mRNA_P-wetherbeei_contig6003.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6003 2285..3450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6003.2.1 ID=prot_P-wetherbeei_contig6003.2.1|Name=mRNA_P-wetherbeei_contig6003.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp
GFEEATGGFTFAVPFEGSGAGAGGYMGPGGDAVDDDSYIAAFGALSGVRH
VEKIDIKYATRAKRVDVRRLKKDIWKRINLAPTAAEAASGCKSHGGDGGT
DGGIRQSSASLPPSGELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANE
KGLRLEGREDLTDLSIAADPGAVAAVY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022816Condensin_barren_su2