mRNA_P-wetherbeei_contig6.9.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6.9.1 vs. uniprot
Match: A0A6H5J9H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H6_9PHAE) HSP 1 Score: 118 bits (295), Expect = 1.280e-27 Identity = 61/106 (57.55%), Postives = 76/106 (71.70%), Query Frame = 1
Query: 1 QIPQFLLIGTSEILTSVTAMEFFYSQAPPEAKSTSAALNLSTTALGSWITIPLLFAANHGVFAGRRGGRDNAWRPWVPSDLNDGKLECYFLVLALLMALALAVFVA 318
Q+PQ+LLIGTSEIL++VT++EFFY++AP + SA LNL TTALGSW+T+PLL N G F PWV DLNDG+LE YF VLA L+A++L VFVA
Sbjct: 551 QVPQYLLIGTSEILSAVTSLEFFYAEAPTTVRGVSAGLNLLTTALGSWVTVPLLSLVNSGAFGS----------PWVTDDLNDGRLELYFCVLAGLVAISLLVFVA 646
BLAST of mRNA_P-wetherbeei_contig6.9.1 vs. uniprot
Match: A0A7R9UG45_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG45_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.330e-27 Identity = 63/126 (50.00%), Postives = 78/126 (61.90%), Query Frame = 1
Query: 1 QIPQFLLIGTSEILTSVTAMEFFYSQAPPEAKSTSAALNLSTTALGSWITIPLLFAANHGVFAGRRGGRDNAWRPWVPSDLNDGKLECYFLVLALLMALALAVFVAVASRYEYPRWQQRRLVLPHD 378
Q+PQFLL+GTSEIL SVTAMEFFYSQ P +S SAALNL TTALGSW TIPL+ N N WVP DLN G LE +F+V+ +M + LA F+ A Y+Y + + + + D
Sbjct: 216 QVPQFLLVGTSEILASVTAMEFFYSQTPSNMRSISAALNLLTTALGSWATIPLVLVVNA-----------NKSDAWVPDDLNKGHLEQFFVVIVAIMVVNLAAFMWFAKGYKYVKATELKALAEED 330
BLAST of mRNA_P-wetherbeei_contig6.9.1 vs. uniprot
Match: A0A7R9UH25_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UH25_9STRA) HSP 1 Score: 114 bits (284), Expect = 2.970e-26 Identity = 63/126 (50.00%), Postives = 78/126 (61.90%), Query Frame = 1
Query: 1 QIPQFLLIGTSEILTSVTAMEFFYSQAPPEAKSTSAALNLSTTALGSWITIPLLFAANHGVFAGRRGGRDNAWRPWVPSDLNDGKLECYFLVLALLMALALAVFVAVASRYEYPRWQQRRLVLPHD 378
Q+PQFLL+GTSEIL SVTAMEFFYSQ P +S SAALNL TTALGSW TIPL+ N N WVP DLN G LE +F+V+ +M + LA F+ A Y+Y + + + + D
Sbjct: 431 QVPQFLLVGTSEILASVTAMEFFYSQTPSNMRSISAALNLLTTALGSWATIPLVLVVNA-----------NKSDAWVPDDLNKGHLEQFFVVIVAIMVVNLAAFMWFAKGYKYVKATELKALAEED 545
BLAST of mRNA_P-wetherbeei_contig6.9.1 vs. uniprot
Match: A0A812SUJ8_SYMMI (NPF8.1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SUJ8_SYMMI) HSP 1 Score: 105 bits (262), Expect = 5.340e-26 Identity = 56/112 (50.00%), Postives = 72/112 (64.29%), Query Frame = 1
Query: 4 IPQFLLIGTSEILTSVTAMEFFYSQAPPEAKSTSAALNLSTTALGSWITIPLLFAANHGVFAGRRGGRDNAWRPWVPSDLNDGKLECYFLVLALLMALALAVFVAVASRYEY 339
IPQF LIG +EI ++T++EFFYSQAP +S S ALNL TTALGSW+TIPLL N G+F WVP +L+DG L YF +LA LM + V+ +++ YEY
Sbjct: 1 IPQFCLIGVAEIFAAITSLEFFYSQAPTSMRSVSQALNLFTTALGSWLTIPLLILDNSGLFG----------EEWVPENLDDGHLSRYFFLLAGLMVVNQCVYHYISADYEY 102
BLAST of mRNA_P-wetherbeei_contig6.9.1 vs. uniprot
Match: D7G1M8_ECTSI (Amino acid/peptide transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M8_ECTSI) HSP 1 Score: 108 bits (271), Expect = 1.340e-24 Identity = 56/103 (54.37%), Postives = 72/103 (69.90%), Query Frame = 1
Query: 1 QIPQFLLIGTSEILTSVTAMEFFYSQAPPEAKSTSAALNLSTTALGSWITIPLLFAANHGVFAGRRGGRDNAWRPWVPSDLNDGKLECYFLVLALLMALALAV 309
Q+PQ+LLIGTSEIL++VT++EFFY++AP + SA LNL TTALGSW+T+PLL N G F PWV DLNDG LE YF +LA L+A++ A+
Sbjct: 383 QVPQYLLIGTSEILSAVTSLEFFYAEAPTTVRGVSAGLNLLTTALGSWVTVPLLSLVNSGAFGS----------PWVTDDLNDGHLELYFCLLAGLVAISQAL 475
BLAST of mRNA_P-wetherbeei_contig6.9.1 vs. uniprot
Match: A0A835YK04_9STRA (POT family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK04_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.450e-24 Identity = 58/94 (61.70%), Postives = 67/94 (71.28%), Query Frame = 1
Query: 1 QIPQFLLIGTSEILTSVTAMEFFYSQAPPEAKSTSAALNLSTTALGSWITIPLLFAANHGVFAGRRGGRDNAWRPWVPSDLNDGKLECYFLVLA 282
QIPQF+LIGTSEIL SV+AMEFFYS+AP KSTS+ALNL TTALGSW+TIPL+ N G + R WVP DLN G LE +F +LA
Sbjct: 434 QIPQFILIGTSEILASVSAMEFFYSEAPASMKSTSSALNLLTTALGSWVTIPLIALVNMG----------SEERQWVPEDLNHGHLELFFFLLA 517
BLAST of mRNA_P-wetherbeei_contig6.9.1 vs. uniprot
Match: A0A7S3XL66_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL66_HETAK) HSP 1 Score: 107 bits (266), Expect = 3.310e-24 Identity = 58/111 (52.25%), Postives = 74/111 (66.67%), Query Frame = 1
Query: 10 QFLLIGTSEILTSVTAMEFFYSQAPPEAKSTSAALNLSTTALGSWITIPLLFAANHGVFAGRRGGRDNAWRPWVPSDLNDGKLECYFLVLALLMALALAVFVAVASRYEYP 342
QFLLIGT+EILTS+TAMEFFY AP KST ++LNL TTALGSW+TIPL+ AN+ ++ +PW+ DLN G LE YF +LA LM L +++ AV + P
Sbjct: 236 QFLLIGTAEILTSITAMEFFYEHAPDSMKSTVSSLNLLTTALGSWLTIPLIAFANNV----------DSRKPWISEDLNSGSLEKYFFLLAGLMLLDFSIYAAVCRWWRRP 336
BLAST of mRNA_P-wetherbeei_contig6.9.1 vs. uniprot
Match: A0A4D9CZP4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZP4_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.820e-23 Identity = 55/112 (49.11%), Postives = 72/112 (64.29%), Query Frame = 1
Query: 1 QIPQFLLIGTSEILTSVTAMEFFYSQAPPEAKSTSAALNLSTTALGSWITIPLLFAANHGVFAGRRGGRDNAWRPWVPSDLNDGKLECYFLVLALLMALALAVFVAVASRYE 336
QIPQF+L+G SEILTS+T+ FFY+QAPP +S SA+LNL TTALG+W+ IPL+ AN G WVPSD+N G L +F +LA +MA + F A +Y+
Sbjct: 169 QIPQFVLVGISEILTSITSYAFFYAQAPPNMRSFSASLNLLTTALGTWLCIPLVALANSGKVQ------------WVPSDVNKGNLAAFFFMLAGIMACMIVAFFFHARKYK 268
BLAST of mRNA_P-wetherbeei_contig6.9.1 vs. uniprot
Match: W7TJG8_9STRA (Peptide transporter ptr1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJG8_9STRA) HSP 1 Score: 103 bits (256), Expect = 2.200e-22 Identity = 55/112 (49.11%), Postives = 72/112 (64.29%), Query Frame = 1
Query: 1 QIPQFLLIGTSEILTSVTAMEFFYSQAPPEAKSTSAALNLSTTALGSWITIPLLFAANHGVFAGRRGGRDNAWRPWVPSDLNDGKLECYFLVLALLMALALAVFVAVASRYE 336
QIPQF+L+G SEILTS+T+ FFY+QAPP +S SA+LNL TTALG+W+ IPL+ AN G WVPSD+N G L +F +LA +MA + F A +Y+
Sbjct: 577 QIPQFILVGISEILTSITSYAFFYAQAPPNMRSFSASLNLLTTALGTWLCIPLVALANSGKVQ------------WVPSDVNKGNLAAFFFMLAGMMACMIVAFFFHARKYK 676
BLAST of mRNA_P-wetherbeei_contig6.9.1 vs. uniprot
Match: A0A836BTX8_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BTX8_9CHLO) HSP 1 Score: 102 bits (253), Expect = 5.590e-22 Identity = 57/126 (45.24%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 1 QIPQFLLIGTSEILTSVTAMEFFYSQAPPEAKSTSAALNLSTTALGSWIT--IPLLFAANHGVFAGRRGGRDNAWRPWVPSDLNDGKLECYFLVLALLMALALAVFVAVASRYEYPRWQQRRLVLP 372
Q PQ+L++G SE+L S+ +EFFY QAP +S S AL L++TA+GS+++ I LL AGR+ W+P DLN G+L+ +FL +ALLMAL+ A FVAVA Y Y + +R+V P
Sbjct: 507 QAPQYLIVGASEVLASIGQLEFFYDQAPDVMRSCSMALQLASTAIGSYMSGVIVLLVQVASPAVAGRQ---------WLPRDLNTGRLDLFFLFMALLMALSTAAFVAVAMNYTYKAVEHKRVVAP 623 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6.9.1 >prot_P-wetherbeei_contig6.9.1 ID=prot_P-wetherbeei_contig6.9.1|Name=mRNA_P-wetherbeei_contig6.9.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp QIPQFLLIGTSEILTSVTAMEFFYSQAPPEAKSTSAALNLSTTALGSWITback to top mRNA from alignment at P-wetherbeei_contig6:16322..18053- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6.9.1 ID=mRNA_P-wetherbeei_contig6.9.1|Name=mRNA_P-wetherbeei_contig6.9.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1732bp|location=Sequence derived from alignment at P-wetherbeei_contig6:16322..18053- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6:16322..18053- >mRNA_P-wetherbeei_contig6.9.1 ID=mRNA_P-wetherbeei_contig6.9.1|Name=mRNA_P-wetherbeei_contig6.9.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig6:16322..18053- (Phaeothamnion wetherbeei SAG_119_79)back to top |