mRNA_P-wetherbeei_contig5985.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5985.2.1
Unique NamemRNA_P-wetherbeei_contig5985.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5985.2.1 vs. uniprot
Match: A0A835YMI8_9STRA (FtsH protease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMI8_9STRA)

HSP 1 Score: 289 bits (739), Expect = 8.670e-90
Identity = 155/224 (69.20%), Postives = 180/224 (80.36%), Query Frame = 1
Query:    1 VTLADVAGCDAAKAELTEVVDFLRFPARYTEIGAEIPRGVLLYGPPGTGKTLLARAVAAEAAVGFFVASGSAFVETFAGLGARRVRDLFERARKNAPAIVFIDEVDAVGRRRSEGAAGGSGSGEREATLNQLLTEMDGFGGASGVMVIAATNRPDILDAALLRPGRFDRRVEVALPDLAGRIAILRVSNRSLGPVHAAGKPLAPAVDLSALAARTAGFSGAQLQ 672
            V  ADVAGCD+AK EL EVVDFL+ PA+YTE+GA+IPRGV+L GPPGTGKTLLARAVA EA V F   SGS FVE F G+GA RVRDLF +A++NAP I+FIDE+DAVGR+R  G AGG+   ERE TLNQ+LTEMDGF G  G++VIAATNR DILD+ALLRPGRFDRRV V LPD +GR+A+L+V        HA GKPL+P VDLS++A RT GFSGAQLQ
Sbjct:  257 VNFADVAGCDSAKLELEEVVDFLKNPAKYTELGAKIPRGVILEGPPGTGKTLLARAVAGEAGVPFIAVSGSEFVEMFVGVGASRVRDLFTKAKENAPCIIFIDEIDAVGRQRGAGIAGGND--EREQTLNQILTEMDGFEGNPGIIVIAATNRADILDSALLRPGRFDRRVNVDLPDFSGRMAVLKV--------HARGKPLSPDVDLSSVARRTPGFSGAQLQ 470          
BLAST of mRNA_P-wetherbeei_contig5985.2.1 vs. uniprot
Match: A0A7S1FYN8_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FYN8_9STRA)

HSP 1 Score: 281 bits (720), Expect = 1.580e-87
Identity = 152/224 (67.86%), Postives = 176/224 (78.57%), Query Frame = 1
Query:    1 VTLADVAGCDAAKAELTEVVDFLRFPARYTEIGAEIPRGVLLYGPPGTGKTLLARAVAAEAAVGFFVASGSAFVETFAGLGARRVRDLFERARKNAPAIVFIDEVDAVGRRRSEGAAGGSGSGEREATLNQLLTEMDGFGGASGVMVIAATNRPDILDAALLRPGRFDRRVEVALPDLAGRIAILRVSNRSLGPVHAAGKPLAPAVDLSALAARTAGFSGAQLQ 672
            VT  +VAGCD AK EL EVVDFL+ P +Y+++GA+IPRGV+L GPPGTGKTLLA+AVA EA V FF  SGS FVE F G+GA RVRDLFE+A+KNAP I+FIDE+DAVGR+R  G AGG+   ERE TLNQ+LTEMDGF G SGV+ IAATNR D+LD+ALLRPGRFDRRV V LPD AGR A+L+V        HA GKP+ P VDL A+A RT GFSGA LQ
Sbjct:  199 VTFNEVAGCDGAKLELMEVVDFLKKPEKYSDLGAKIPRGVILDGPPGTGKTLLAKAVAGEAGVPFFSVSGSEFVEMFVGVGASRVRDLFEQAKKNAPCIIFIDEIDAVGRQRGAGFAGGND--EREQTLNQILTEMDGFEGNSGVITIAATNRADVLDSALLRPGRFDRRVTVDLPDFAGRAAVLKV--------HARGKPIEPDVDLEAVARRTPGFSGASLQ 412          
BLAST of mRNA_P-wetherbeei_contig5985.2.1 vs. uniprot
Match: A0A835YNY9_9STRA (Metalloprotease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNY9_9STRA)

HSP 1 Score: 277 bits (709), Expect = 1.690e-86
Identity = 151/220 (68.64%), Postives = 172/220 (78.18%), Query Frame = 1
Query:   13 DVAGCDAAKAELTEVVDFLRFPARYTEIGAEIPRGVLLYGPPGTGKTLLARAVAAEAAVGFFVASGSAFVETFAGLGARRVRDLFERARKNAPAIVFIDEVDAVGRRRSEGAAGGSGSGEREATLNQLLTEMDGFGGASGVMVIAATNRPDILDAALLRPGRFDRRVEVALPDLAGRIAILRVSNRSLGPVHAAGKPLAPAVDLSALAARTAGFSGAQLQ 672
            DVAGCD AK EL EVVDFL+ P +YTE+GA IPRGV+L GPPGTGKTLLARAVA EA V F   SGS FVE F G+GA RVRDLF +A+KNAP I+FIDE+DAVGR+R  G AGG+   ERE TLNQ+LTEMDGF G +G++VIAATNR DILD ALLRPGRFDRRV V LP+  GRIAIL+V        HA GKPL+  VDL ++A RT G+SGAQLQ
Sbjct:  133 DVAGCDQAKLELEEVVDFLKNPTKYTELGATIPRGVILEGPPGTGKTLLARAVAGEAGVPFIAISGSEFVEMFVGVGASRVRDLFGQAKKNAPCIIFIDEIDAVGRQRGAGIAGGND--EREQTLNQILTEMDGFEGNNGIIVIAATNRADILDNALLRPGRFDRRVNVDLPNFTGRIAILKV--------HARGKPLSSDVDLESIARRTPGYSGAQLQ 342          
BLAST of mRNA_P-wetherbeei_contig5985.2.1 vs. uniprot
Match: A0A4D9D8S0_9STRA (AAA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8S0_9STRA)

HSP 1 Score: 279 bits (713), Expect = 1.460e-85
Identity = 150/224 (66.96%), Postives = 176/224 (78.57%), Query Frame = 1
Query:    1 VTLADVAGCDAAKAELTEVVDFLRFPARYTEIGAEIPRGVLLYGPPGTGKTLLARAVAAEAAVGFFVASGSAFVETFAGLGARRVRDLFERARKNAPAIVFIDEVDAVGRRRSEGAAGGSGSGEREATLNQLLTEMDGFGGASGVMVIAATNRPDILDAALLRPGRFDRRVEVALPDLAGRIAILRVSNRSLGPVHAAGKPLAPAVDLSALAARTAGFSGAQLQ 672
            VT  +VAGCD AK ELTEVVDFL+ P +YT++GA+IPRGV+L GPPGTGKTLLA+AVA E+ V F  A+GS FVE F G+GA RVRD+FE+A+KNAP I+FIDE+DAVGR+R  G AGG+   ERE TLNQLLTEMDGF G  G++VIAATNR D+LD ALLRPGRFDRRV V LPD  GR AIL+V        H+ GKPLAP VDL +++ RT GFSGA LQ
Sbjct:  252 VTFDNVAGCDGAKMELTEVVDFLKNPEKYTDVGAKIPRGVILDGPPGTGKTLLAKAVAGESGVPFISAAGSEFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGFAGGND--EREQTLNQLLTEMDGFEGNPGIIVIAATNRADVLDQALLRPGRFDRRVTVDLPDFKGRTAILKV--------HSKGKPLAPDVDLESISRRTPGFSGASLQ 465          
BLAST of mRNA_P-wetherbeei_contig5985.2.1 vs. uniprot
Match: A0A6I4YMX5_9DEIO (AAA family ATPase (Fragment) n=1 Tax=Deinococcus xianganensis TaxID=1507289 RepID=A0A6I4YMX5_9DEIO)

HSP 1 Score: 262 bits (670), Expect = 1.510e-85
Identity = 144/223 (64.57%), Postives = 165/223 (73.99%), Query Frame = 1
Query:    4 TLADVAGCDAAKAELTEVVDFLRFPARYTEIGAEIPRGVLLYGPPGTGKTLLARAVAAEAAVGFFVASGSAFVETFAGLGARRVRDLFERARKNAPAIVFIDEVDAVGRRRSEGAAGGSGSGEREATLNQLLTEMDGFGGASGVMVIAATNRPDILDAALLRPGRFDRRVEVALPDLAGRIAILRVSNRSLGPVHAAGKPLAPAVDLSALAARTAGFSGAQLQ 672
            T  DVAGCD AKA+L EVVDFLR P RY ++GA IP GVLL GPPG+GKTLLA+AVA EA V +F  SGS FVE F G+GA RVRDLFE+ARKNAP IVFIDE+DAVGR+R     GG+   ERE TLNQLL EMDGF     V+++AATNRPD+LDAALLRPGRFDR+V V  PD+ GR  ILR+        HA  KPL P+VDL  +A RTAG  GA L+
Sbjct:    5 TFGDVAGCDEAKADLQEVVDFLRHPDRYHQLGARIPHGVLLVGPPGSGKTLLAKAVAGEARVPYFSISGSDFVEMFVGVGAARVRDLFEQARKNAPCIVFIDEIDAVGRKRGMNMQGGND--EREQTLNQLLVEMDGFSSGQEVIILAATNRPDVLDAALLRPGRFDRQVVVDAPDVRGREMILRI--------HARKKPLDPSVDLGVIARRTAGMVGADLE 217          
BLAST of mRNA_P-wetherbeei_contig5985.2.1 vs. uniprot
Match: F0YDZ0_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDZ0_AURAN)

HSP 1 Score: 271 bits (692), Expect = 1.610e-85
Identity = 149/224 (66.52%), Postives = 171/224 (76.34%), Query Frame = 1
Query:    1 VTLADVAGCDAAKAELTEVVDFLRFPARYTEIGAEIPRGVLLYGPPGTGKTLLARAVAAEAAVGFFVASGSAFVETFAGLGARRVRDLFERARKNAPAIVFIDEVDAVGRRRSEGAAGGSGSGEREATLNQLLTEMDGFGGASGVMVIAATNRPDILDAALLRPGRFDRRVEVALPDLAGRIAILRVSNRSLGPVHAAGKPLAPAVDLSALAARTAGFSGAQLQ 672
            VT  DVAGCDA+K EL EVVDFL  P ++T++GA+ PRGVLL GPPGTGKTLLARAVA EA V F  ASGS FVE F G+GA R+R LF  A+KNAP I+FIDE+DA+GR+RS G  G + + ERE TLNQ+LTEMDGF G +GV+VIAATNR DILD ALLRPGRFDRRV V LPD AGR+ IL+V        H   KPLAP VDL A+A+R  GFSGA LQ
Sbjct:   28 VTFDDVAGCDASKLELEEVVDFLSNPEKFTKVGAQSPRGVLLEGPPGTGKTLLARAVAGEAGVPFISASGSEFVEMFVGVGASRIRSLFADAKKNAPCIIFIDEIDAIGRQRSSGG-GFASNDEREQTLNQILTEMDGFSGNTGVIVIAATNRGDILDNALLRPGRFDRRVPVDLPDKAGRVEILKV--------HCRDKPLAPEVDLDAIASRAIGFSGASLQ 242          
BLAST of mRNA_P-wetherbeei_contig5985.2.1 vs. uniprot
Match: A0A2S9F9Q8_9MYCO (Cell division protein FtsH (Fragment) n=1 Tax=Mycobacterium sp. ITM-2017-0098 TaxID=2099692 RepID=A0A2S9F9Q8_9MYCO)

HSP 1 Score: 269 bits (688), Expect = 3.500e-85
Identity = 145/222 (65.32%), Postives = 170/222 (76.58%), Query Frame = 1
Query:    4 TLADVAGCDAAKAELTEVVDFLRFPARYTEIGAEIPRGVLLYGPPGTGKTLLARAVAAEAAVGFFVASGSAFVETFAGLGARRVRDLFERARKNAPAIVFIDEVDAVGRRRSEGAAGGSGSGEREATLNQLLTEMDGFGGASGVMVIAATNRPDILDAALLRPGRFDRRVEVALPDLAGRIAILRVSNRSLGPVHAAGKPLAPAVDLSALAARTAGFSGAQL 669
            T ADVAG D A  EL E+ DFL+ P+RY  +GA+IP+GVLLYGPPGTGKTLLARAVA EA V FF  SGS FVE F G+GA RVRD+FE+A++N+P I+F+DE+DAVGR+R  GA  G G  ERE TLNQLL EMDGFG   GV++IAATNRPDILD ALLRPGRFDR++ V+ PDLAGR A+L+V        H+AGKP+AP  DL  LA RT G SGA L
Sbjct:   21 TFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKQNSPCIIFVDEIDAVGRQR--GAGMGGGHDEREQTLNQLLVEMDGFGDRQGVILIAATNRPDILDPALLRPGRFDRQIPVSSPDLAGRRAVLKV--------HSAGKPIAPDADLDGLAKRTVGMSGADL 232          
BLAST of mRNA_P-wetherbeei_contig5985.2.1 vs. uniprot
Match: UPI000AA22C83 (FtsH/Yme1/Tma family ATP-dependent metallopeptidase n=1 Tax=Mycolicibacterium malmesburyense TaxID=1566886 RepID=UPI000AA22C83)

HSP 1 Score: 267 bits (683), Expect = 4.600e-85
Identity = 145/222 (65.32%), Postives = 169/222 (76.13%), Query Frame = 1
Query:    4 TLADVAGCDAAKAELTEVVDFLRFPARYTEIGAEIPRGVLLYGPPGTGKTLLARAVAAEAAVGFFVASGSAFVETFAGLGARRVRDLFERARKNAPAIVFIDEVDAVGRRRSEGAAGGSGSGEREATLNQLLTEMDGFGGASGVMVIAATNRPDILDAALLRPGRFDRRVEVALPDLAGRIAILRVSNRSLGPVHAAGKPLAPAVDLSALAARTAGFSGAQL 669
            T  DVAG D A  EL E+ DFL+ P+RY  +GA+IP+GVLL+GPPGTGKTLLARAVA EA V FF  SGS FVE F G+GA RVRDLFE+A++NAP I+F+DE+DAVGR+R  GA  G G  ERE TLNQLL EMDGFG   GV++IAATNRPDILD ALLRPGRFDR++ V+ PDLAGR A+L+V        H+AGKP+AP  DL  LA RT G SGA L
Sbjct:  161 TFVDVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLFGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNAPCIIFVDEIDAVGRQR--GAGLGGGHDEREQTLNQLLVEMDGFGDRQGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLKV--------HSAGKPIAPDADLDGLAKRTVGMSGADL 372          
BLAST of mRNA_P-wetherbeei_contig5985.2.1 vs. uniprot
Match: A0A7S0BSY1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BSY1_9RHOD)

HSP 1 Score: 268 bits (686), Expect = 1.000e-84
Identity = 147/224 (65.62%), Postives = 169/224 (75.45%), Query Frame = 1
Query:    1 VTLADVAGCDAAKAELTEVVDFLRFPARYTEIGAEIPRGVLLYGPPGTGKTLLARAVAAEAAVGFFVASGSAFVETFAGLGARRVRDLFERARKNAPAIVFIDEVDAVGRRRSEGAAGGSGSGEREATLNQLLTEMDGFGGASGVMVIAATNRPDILDAALLRPGRFDRRVEVALPDLAGRIAILRVSNRSLGPVHAAGKPLAPAVDLSALAARTAGFSGAQLQ 672
            +  ADVAGCD AK EL EVV FL+ P  ++E+GA+IPRGV+L GPPGTGKTLLARAVA EA V FF  SGS FVE F G+GA RVRDLF +A+KNAP I+FIDE+DAVGR+R  G AGG+   ERE TLNQ+L EMDGF G +GV+VIAATNR DILD ALLRPGRFDRR+ V LPD  GR+ IL+V        H  GKPL P VD+  +A RT GFSGA LQ
Sbjct:    7 IQFADVAGCDGAKQELQEVVTFLKEPDTFSELGAKIPRGVILEGPPGTGKTLLARAVAGEAGVPFFSISGSEFVEMFIGVGASRVRDLFGQAKKNAPCIIFIDEIDAVGRQRGAGIAGGND--EREQTLNQILVEMDGFEGNNGVIVIAATNRADILDQALLRPGRFDRRIIVDLPDFKGRVNILKV--------HCRGKPLGPDVDIEMIARRTPGFSGASLQ 220          
BLAST of mRNA_P-wetherbeei_contig5985.2.1 vs. uniprot
Match: A0A7C7DMS1_9FIRM (ATP-dependent zinc metalloprotease FtsH n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C7DMS1_9FIRM)

HSP 1 Score: 273 bits (699), Expect = 1.130e-84
Identity = 147/223 (65.92%), Postives = 172/223 (77.13%), Query Frame = 1
Query:    4 TLADVAGCDAAKAELTEVVDFLRFPARYTEIGAEIPRGVLLYGPPGTGKTLLARAVAAEAAVGFFVASGSAFVETFAGLGARRVRDLFERARKNAPAIVFIDEVDAVGRRRSEGAAGGSGSGEREATLNQLLTEMDGFGGASGVMVIAATNRPDILDAALLRPGRFDRRVEVALPDLAGRIAILRVSNRSLGPVHAAGKPLAPAVDLSALAARTAGFSGAQLQ 672
            T ADVAG D AK EL E+V+FL+ P ++ E+GA+IPRG+LL GPPGTGKTLL RAVA EA V FF+ SGS FVE F G+GA RVRDLF++A+KNAP IVFIDE+DAVGR+R  GA  G G  ERE TLNQLL EMDGF   +G++V+AATNRPD+LD ALLRPGRFDR++ V +PDLAGR AILRV        HA GKPL P VDL  LA RT GF+GA L+
Sbjct:  157 TFADVAGVDEAKEELAEIVEFLKHPKKFIELGAKIPRGILLVGPPGTGKTLLGRAVAGEAGVPFFIISGSDFVEMFVGVGAARVRDLFDQAKKNAPCIVFIDEIDAVGRQR--GAGLGGGHDEREQTLNQLLVEMDGFEANNGIIVLAATNRPDVLDPALLRPGRFDRQIVVDMPDLAGREAILRV--------HARGKPLGPDVDLKTLARRTPGFTGADLE 369          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5985.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YMI8_9STRA8.670e-9069.20FtsH protease n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A7S1FYN8_9STRA1.580e-8767.86Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A835YNY9_9STRA1.690e-8668.64Metalloprotease n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A4D9D8S0_9STRA1.460e-8566.96AAA domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A6I4YMX5_9DEIO1.510e-8564.57AAA family ATPase (Fragment) n=1 Tax=Deinococcus x... [more]
F0YDZ0_AURAN1.610e-8566.52AAA domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A2S9F9Q8_9MYCO3.500e-8565.32Cell division protein FtsH (Fragment) n=1 Tax=Myco... [more]
UPI000AA22C834.600e-8565.32FtsH/Yme1/Tma family ATP-dependent metallopeptidas... [more]
A0A7S0BSY1_9RHOD1.000e-8465.63Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7C7DMS1_9FIRM1.130e-8465.92ATP-dependent zinc metalloprotease FtsH n=1 Tax=Fi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5985contigP-wetherbeei_contig5985:2682..3593 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1122247.C731_3951
Preferred nameftsH
PFAMsAAA,FtsH_ext,Peptidase_M41
Model size713
Max annot lvl201174|Actinobacteria
KEGG koko:K03798
KEGG ModuleM00742
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019538,GO:0030163,GO:0040007,GO:0042623,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575
Exons2
Evalue7.82e-85
EggNOG OGsCOG0465@1|root,COG0465@2|Bacteria,2GJ4Q@201174|Actinobacteria,2334F@1762|Mycobacteriaceae
DescriptionActs as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Cds size711
COG categoryO
BRITEko00000,ko00002,ko01000,ko01002,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186880.009735-CDS-P-wetherbeei_contig5985:2681..32631683186880.009735-CDS-P-wetherbeei_contig5985:2681..3263Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5985 2682..3263 +
1683186880.021933-CDS-P-wetherbeei_contig5985:3462..35911683186880.021933-CDS-P-wetherbeei_contig5985:3462..3591Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5985 3463..3591 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5985.2.1prot_P-wetherbeei_contig5985.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5985 2682..3591 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5985.2.1

>prot_P-wetherbeei_contig5985.2.1 ID=prot_P-wetherbeei_contig5985.2.1|Name=mRNA_P-wetherbeei_contig5985.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=237bp
VTLADVAGCDAAKAELTEVVDFLRFPARYTEIGAEIPRGVLLYGPPGTGK
TLLARAVAAEAAVGFFVASGSAFVETFAGLGARRVRDLFERARKNAPAIV
FIDEVDAVGRRRSEGAAGGSGSGEREATLNQLLTEMDGFGGASGVMVIAA
TNRPDILDAALLRPGRFDRRVEVALPDLAGRIAILRVSNRSLGPVHAAGK
PLAPAVDLSALAARTAGFSGAQLQISSTRRQSRQPDA
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mRNA from alignment at P-wetherbeei_contig5985:2682..3593+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5985.2.1 ID=mRNA_P-wetherbeei_contig5985.2.1|Name=mRNA_P-wetherbeei_contig5985.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=912bp|location=Sequence derived from alignment at P-wetherbeei_contig5985:2682..3593+ (Phaeothamnion wetherbeei SAG_119_79)
GTCACCCTCGCCGACGTCGCCGGCTGCGACGCCGCCAAGGCCGAGCTGAC GGAGGTAGTCGACTTTTTGCGGTTTCCCGCCCGTTACACCGAAATCGGCG CCGAGATCCCCCGCGGTGTGCTCCTCTATGGGCCCCCGGGCACGGGCAAG ACGCTCTTAGCCCGCGCCGTTGCCGCAGAGGCCGCCGTCGGCTTCTTCGT GGCGTCCGGCTCGGCGTTCGTGGAAACATTTGCCGGCCTCGGCGCCCGCC GCGTCCGCGACTTGTTTGAGCGCGCCCGGAAGAACGCGCCCGCCATCGTC TTCATCGACGAGGTCGACGCCGTCGGCCGTCGCCGCAGCGAGGGCGCCGC TGGCGGCAGCGGCTCCGGTGAGCGGGAGGCGACGCTCAACCAGCTGCTGA CGGAGATGGACGGTTTCGGCGGCGCCAGTGGCGTGATGGTTATTGCGGCG ACAAACCGTCCAGACATTCTGGACGCGGCGCTGCTGCGGCCGGGCCGCTT CGACCGACGTGTGGAGGTAGCGCTTCCTGACCTCGCCGGACGCATCGCTA TCCTCAGGGTCAGTAATCGGTCGTTGGGACCGGTAGAGAGGAGAGAAAGA GCAGAGGAGAACGATGGAAGGAGACGGCGGCCGGCAAAGAATGTTGTTTT CGGCTTCTTCCGACTTTTCGCTCTGTCTCTGCTTTTGAAAGAACCCGTGA TGGGGACAGCAGCGTCGCCGACGAGGAAGCAGACCATTCAACATTTGTAT TCCCCCTTTTGTTTGTTCTCGAACAATGCAGGTGCATGCCGCCGGCAAGC CGCTGGCGCCGGCCGTCGACCTGTCGGCGCTGGCCGCCCGCACCGCCGGC TTCTCCGGAGCTCAGCTCCAAATCTCCTCAACGAGGCGGCAATCGCGGCA GCCCGACGCAGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5985:2682..3593+

>mRNA_P-wetherbeei_contig5985.2.1 ID=mRNA_P-wetherbeei_contig5985.2.1|Name=mRNA_P-wetherbeei_contig5985.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=711bp|location=Sequence derived from alignment at P-wetherbeei_contig5985:2682..3593+ (Phaeothamnion wetherbeei SAG_119_79)
GTCACCCTCGCCGACGTCGCCGGCTGCGACGCCGCCAAGGCCGAGCTGAC
GGAGGTAGTCGACTTTTTGCGGTTTCCCGCCCGTTACACCGAAATCGGCG
CCGAGATCCCCCGCGGTGTGCTCCTCTATGGGCCCCCGGGCACGGGCAAG
ACGCTCTTAGCCCGCGCCGTTGCCGCAGAGGCCGCCGTCGGCTTCTTCGT
GGCGTCCGGCTCGGCGTTCGTGGAAACATTTGCCGGCCTCGGCGCCCGCC
GCGTCCGCGACTTGTTTGAGCGCGCCCGGAAGAACGCGCCCGCCATCGTC
TTCATCGACGAGGTCGACGCCGTCGGCCGTCGCCGCAGCGAGGGCGCCGC
TGGCGGCAGCGGCTCCGGTGAGCGGGAGGCGACGCTCAACCAGCTGCTGA
CGGAGATGGACGGTTTCGGCGGCGCCAGTGGCGTGATGGTTATTGCGGCG
ACAAACCGTCCAGACATTCTGGACGCGGCGCTGCTGCGGCCGGGCCGCTT
CGACCGACGTGTGGAGGTAGCGCTTCCTGACCTCGCCGGACGCATCGCTA
TCCTCAGGGTCAGTAATCGGTCGTTGGGACCGGTGCATGCCGCCGGCAAG
CCGCTGGCGCCGGCCGTCGACCTGTCGGCGCTGGCCGCCCGCACCGCCGG
CTTCTCCGGAGCTCAGCTCCAAATCTCCTCAACGAGGCGGCAATCGCGGC
AGCCCGACGCA
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