mRNA_P-wetherbeei_contig5964.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5964.2.1
Unique NamemRNA_P-wetherbeei_contig5964.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5964.2.1 vs. uniprot
Match: A0A1H8W751_9PROT (Branched-chain amino acid transport system permease protein n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8W751_9PROT)

HSP 1 Score: 577 bits (1488), Expect = 3.890e-202
Identity = 290/323 (89.78%), Postives = 308/323 (95.36%), Query Frame = 3
Query:  909 DMIAALRTPRGLITAVLLLVLAVLPLLTQAFDQRYLLSIGTRIVIWSIAAVSLNMILGYGGLVSFGHAVFFGIGGYAVGILSANGLQSGWLQWPVAIAASVLWAALVGALSLRTRGLYFIMITLAFAQLVFYVSAGLEAYGADDGLNISRSRFPGLIDLRDKASFYWLCFVLLLGTLWFCSRFANSRFGFVLRGAKSNDQRMMALGFPVFRYRLAAFILSGAFGGLAGILLANEGAYVSPAMMSWVKSGDLIVIVVLGGMGTLFGPLYGTIAFFVLEESLKPLLDLGRKGWGEYWQIVFGPMLILIALYAKGGIDSLLGRRRG 1877
             +IA+LRTPRGLITA+LLLVLAVLPLLTQAFDQRYLLSIGTRIVIW+IAA+SLNMILGYGG+VSFGHAVFFGIGGYAVGILS +G+ SG++QWPVAI A+ LWAALVGALSLRTRGLYFIMITLAFAQLVFYV  GLEAYGADDGLNISRSRFPGLID+RDKASFYWLCF LL GTLWFCSRFAN+RFG V+RGAKSN+ RMMALGFPVFRYRLAAF LSGAFGGLAGILLANEGAY+SPAMMSWVKSGDLIVIVVLGGMGTLFGPLYGTIAFFVLEESLKPLLDL RKGWGEYWQIVFGPML+LIALYA+GGIDSL GRR G
Sbjct:    2 SLIASLRTPRGLITALLLLVLAVLPLLTQAFDQRYLLSIGTRIVIWAIAAISLNMILGYGGMVSFGHAVFFGIGGYAVGILSHHGVASGFVQWPVAIVAATLWAALVGALSLRTRGLYFIMITLAFAQLVFYVGGGLEAYGADDGLNISRSRFPGLIDMRDKASFYWLCFALLCGTLWFCSRFANARFGLVIRGAKSNELRMMALGFPVFRYRLAAFTLSGAFGGLAGILLANEGAYISPAMMSWVKSGDLIVIVVLGGMGTLFGPLYGTIAFFVLEESLKPLLDLLRKGWGEYWQIVFGPMLVLIALYARGGIDSLFGRRHG 324          
BLAST of mRNA_P-wetherbeei_contig5964.2.1 vs. uniprot
Match: A0A1Q3KPZ5_9PROT (Branched-chain amino acid ABC transporter permease n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Q3KPZ5_9PROT)

HSP 1 Score: 564 bits (1453), Expect = 7.130e-197
Identity = 281/319 (88.09%), Postives = 300/319 (94.04%), Query Frame = 3
Query:  915 IAALRTPRGLITAVLLLVLAVLPLLTQAFDQRYLLSIGTRIVIWSIAAVSLNMILGYGGLVSFGHAVFFGIGGYAVGILSANGLQSGWLQWPVAIAASVLWAALVGALSLRTRGLYFIMITLAFAQLVFYVSAGLEAYGADDGLNISRSRFPGLIDLRDKASFYWLCFVLLLGTLWFCSRFANSRFGFVLRGAKSNDQRMMALGFPVFRYRLAAFILSGAFGGLAGILLANEGAYVSPAMMSWVKSGDLIVIVVLGGMGTLFGPLYGTIAFFVLEESLKPLLDLGRKGWGEYWQIVFGPMLILIALYAKGGIDSLLGRR 1871
            +AALRTPRGL+TA++LLVLAVLPLLTQAFDQRYLLS+GTRIVIWSIAAVSLNMILGYGGLVSFGHAVFFGIGGYAVGILSA+G+ SGW+QWPVA+A + LWAAL+GALSLRTRGLYFIMITLAFAQLV+YV  GLEAYG DDGLNISRSRF GLIDLRDK SFYWLCF  L GTLWFC RFANSRFG+V+RGAKSND RMMALGFPVFRYRLAAF +SGAFGGLAGILLANEGAYVSPAMMSWVKSGDLIVIVVLGGMGTL GPL+G IAFF LEESL PLLDL RKGWGEYWQIVFGP+L+LIALYA+GGIDSLLGRR
Sbjct:    1 MAALRTPRGLLTALILLVLAVLPLLTQAFDQRYLLSVGTRIVIWSIAAVSLNMILGYGGLVSFGHAVFFGIGGYAVGILSAHGVSSGWIQWPVALAVATLWAALIGALSLRTRGLYFIMITLAFAQLVYYVGGGLEAYGGDDGLNISRSRFSGLIDLRDKPSFYWLCFAALCGTLWFCGRFANSRFGYVIRGAKSNDLRMMALGFPVFRYRLAAFTISGAFGGLAGILLANEGAYVSPAMMSWVKSGDLIVIVVLGGMGTLLGPLFGAIAFFALEESLPPLLDLLRKGWGEYWQIVFGPLLVLIALYARGGIDSLLGRR 319          
BLAST of mRNA_P-wetherbeei_contig5964.2.1 vs. uniprot
Match: A0A521MEG7_9HYPH (Branched-chain amino acid ABC transporter permease n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521MEG7_9HYPH)

HSP 1 Score: 563 bits (1452), Expect = 1.010e-196
Identity = 280/321 (87.23%), Postives = 301/321 (93.77%), Query Frame = 3
Query:  915 IAALRTPRGLITAVLLLVLAVLPLLTQAFDQRYLLSIGTRIVIWSIAAVSLNMILGYGGLVSFGHAVFFGIGGYAVGILSANGLQSGWLQWPVAIAASVLWAALVGALSLRTRGLYFIMITLAFAQLVFYVSAGLEAYGADDGLNISRSRFPGLIDLRDKASFYWLCFVLLLGTLWFCSRFANSRFGFVLRGAKSNDQRMMALGFPVFRYRLAAFILSGAFGGLAGILLANEGAYVSPAMMSWVKSGDLIVIVVLGGMGTLFGPLYGTIAFFVLEESLKPLLDLGRKGWGEYWQIVFGPMLILIALYAKGGIDSLLGRRRG 1877
            +AA RTPRGL T  +LLVLAVLPLLTQAFDQRYLLSIGTRIVIW+IAAVSLNMILGYGGLVSFGHAVFFGIGGYAVGIL A+G+ SGW+QWPV +A + LWAALVGALSLRTRG+YFIMITLAFAQL++YV  GLEAYGADDGLNISRSRF GLID+RDKASFYWLCFVLL GTLWFCSRFAN+RFGFV+RGAKSND RM ALGFPVFRYRLAAF +SGAFGGLAGILLANEGAY+SPAMMSWVKSGDLIVIVVLGGMGTLFGPLYGTIAFFVLEESL P+L+L +KGWGEYWQIVFGPML+LIALYA+GGIDSL GRR G
Sbjct:    1 MAAFRTPRGLATVAILLVLAVLPLLTQAFDQRYLLSIGTRIVIWAIAAVSLNMILGYGGLVSFGHAVFFGIGGYAVGILDAHGVSSGWIQWPVGVAMAALWAALVGALSLRTRGVYFIMITLAFAQLLYYVGVGLEAYGADDGLNISRSRFAGLIDMRDKASFYWLCFVLLCGTLWFCSRFANARFGFVIRGAKSNDLRMTALGFPVFRYRLAAFTISGAFGGLAGILLANEGAYISPAMMSWVKSGDLIVIVVLGGMGTLFGPLYGTIAFFVLEESLPPVLNLVQKGWGEYWQIVFGPMLVLIALYARGGIDSLFGRRHG 321          
BLAST of mRNA_P-wetherbeei_contig5964.2.1 vs. uniprot
Match: A0A259MLP7_9PROT (Branched-chain amino acid ABC transporter permease n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MLP7_9PROT)

HSP 1 Score: 551 bits (1419), Expect = 1.060e-191
Identity = 271/320 (84.69%), Postives = 297/320 (92.81%), Query Frame = 3
Query:  912 MIAALRTPRGLITAVLLLVLAVLPLLTQAFDQRYLLSIGTRIVIWSIAAVSLNMILGYGGLVSFGHAVFFGIGGYAVGILSANGLQSGWLQWPVAIAASVLWAALVGALSLRTRGLYFIMITLAFAQLVFYVSAGLEAYGADDGLNISRSRFPGLIDLRDKASFYWLCFVLLLGTLWFCSRFANSRFGFVLRGAKSNDQRMMALGFPVFRYRLAAFILSGAFGGLAGILLANEGAYVSPAMMSWVKSGDLIVIVVLGGMGTLFGPLYGTIAFFVLEESLKPLLDLGRKGWGEYWQIVFGPMLILIALYAKGGIDSLLGRR 1871
            MIAALRTPRGL TA++LLVLA LPLLTQAFDQRYLLSIGTRIVIWSIAAVSLNMILGYGGLVSFGHA+FFGIGGYA+GILSA G+ SGW+QWPVA+ A+  WA ++GALSLRTRGLYFIMITLAFAQLV+YV +GLEAYG DDGLNISRSRFPGLIDLRDKASFYWLCF LL  +LWFC R+ANSRFG V+RGAKSN+ RM ALGFPVFRYRLAAF ++GA GGL+GILLANEGAYVSPAMMSW+KSGDLIVIVVLGGMGTLFGPLYGTIAFFVLEE+L P+L+L  KGWGEYW IVFGP+L+LIALYA+GGIDSLLGRR
Sbjct:    1 MIAALRTPRGLATALILLVLAALPLLTQAFDQRYLLSIGTRIVIWSIAAVSLNMILGYGGLVSFGHAMFFGIGGYAIGILSAEGISSGWIQWPVALLAATAWAVVIGALSLRTRGLYFIMITLAFAQLVYYVGSGLEAYGGDDGLNISRSRFPGLIDLRDKASFYWLCFALLCASLWFCGRYANSRFGLVIRGAKSNELRMTALGFPVFRYRLAAFTIAGALGGLSGILLANEGAYVSPAMMSWMKSGDLIVIVVLGGMGTLFGPLYGTIAFFVLEEALPPILNLAHKGWGEYWMIVFGPLLVLIALYARGGIDSLLGRR 320          
BLAST of mRNA_P-wetherbeei_contig5964.2.1 vs. uniprot
Match: A0A1T4RLL5_9HYPH (Branched-chain amino acid transport system permease protein n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4RLL5_9HYPH)

HSP 1 Score: 537 bits (1383), Expect = 3.540e-186
Identity = 263/323 (81.42%), Postives = 290/323 (89.78%), Query Frame = 3
Query:  909 DMIAALRTPRGLITAVLLLVLAVLPLLTQAFDQRYLLSIGTRIVIWSIAAVSLNMILGYGGLVSFGHAVFFGIGGYAVGILSANGLQSGWLQWPVAIAASVLWAALVGALSLRTRGLYFIMITLAFAQLVFYVSAGLEAYGADDGLNISRSRFPGLIDLRDKASFYWLCFVLLLGTLWFCSRFANSRFGFVLRGAKSNDQRMMALGFPVFRYRLAAFILSGAFGGLAGILLANEGAYVSPAMMSWVKSGDLIVIVVLGGMGTLFGPLYGTIAFFVLEESLKPLLDLGRKGWGEYWQIVFGPMLILIALYAKGGIDSLLGRRRG 1877
             +IA+LRTPRGL+T  LLLVLA+LPLLTQA DQRYLL +GTRIVIWSIAA SLNMILGYGGLVSFGHA FFGIGGY VGILSANG+ SGW+QWP A+A + +WAAL+GALSLRTRG+YFIMITLAFAQLV+Y+ +GLEAYG DDGLNI RSRF GLIDLRDKASFYWLCF LLL TLWF SR  NSRFG+VLRGAKSN+ RM ALGFP+FRYRLAAF ++GAFG LAGILLANEGAY+SPAMMSWVKSGDLIVIVVLGGMG LFGPLYG I FF +EE LKPLLDL  KGWGEYWQIVFGP+L+++ALYA+GGIDSLLGRR G
Sbjct:    4 SLIASLRTPRGLVTTALLLVLALLPLLTQALDQRYLLLVGTRIVIWSIAAASLNMILGYGGLVSFGHAAFFGIGGYTVGILSANGINSGWIQWPAAVAIAGVWAALIGALSLRTRGVYFIMITLAFAQLVYYLGSGLEAYGGDDGLNIGRSRFSGLIDLRDKASFYWLCFALLLATLWFSSRLVNSRFGYVLRGAKSNELRMTALGFPIFRYRLAAFAIAGAFGALAGILLANEGAYISPAMMSWVKSGDLIVIVVLGGMGALFGPLYGAIGFFAVEEFLKPLLDLLHKGWGEYWQIVFGPLLVMVALYAQGGIDSLLGRRHG 326          
BLAST of mRNA_P-wetherbeei_contig5964.2.1 vs. uniprot
Match: A0A537MT35_9PROT (Branched-chain amino acid ABC transporter permease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MT35_9PROT)

HSP 1 Score: 523 bits (1348), Expect = 5.140e-181
Identity = 258/315 (81.90%), Postives = 287/315 (91.11%), Query Frame = 3
Query:  933 PRGLITAVLLLVLAVLPLLTQAFDQRYLLSIGTRIVIWSIAAVSLNMILGYGGLVSFGHAVFFGIGGYAVGILSANGLQSGWLQWPVAIAASVLWAALVGALSLRTRGLYFIMITLAFAQLVFYVSAGLEAYGADDGLNISRSRFPGLIDLRDKASFYWLCFVLLLGTLWFCSRFANSRFGFVLRGAKSNDQRMMALGFPVFRYRLAAFILSGAFGGLAGILLANEGAYVSPAMMSWVKSGDLIVIVVLGGMGTLFGPLYGTIAFFVLEESLKPLLDLGRKGWGEYWQIVFGPMLILIALYAKGGIDSLLGRRRG 1877
            PR +I  +LL +LAVLPLLTQAFDQRYLLS+GTRIVIWSIAAVSLNMILGYGGLVSFGHA FFGIGGYAVGILSA G+Q+GWLQWPVA+AAS+LWAALVGALSLRTRG+YFIMITLAFAQLV+Y+++GLE YG DDGLNISRSRF GL+DLRDKA+FYWLCF LL GTLWFC R ANSRFG VLRGA++N+ RM ALGFPVFRYRL A +++GAFGGLAGIL+ANEGAYVSPAMMSWVKSGDLIVIVVLGG+G LFGPLYG I FF LEE+LKP LDL  KGWGEYWQIVFGP+L+LIAL+A+GG+ SLL RR G
Sbjct:    3 PRNMIALLLLALLAVLPLLTQAFDQRYLLSVGTRIVIWSIAAVSLNMILGYGGLVSFGHAAFFGIGGYAVGILSAEGIQNGWLQWPVALAASMLWAALVGALSLRTRGVYFIMITLAFAQLVYYLASGLEGYGGDDGLNISRSRFAGLLDLRDKATFYWLCFALLCGTLWFCGRLANSRFGTVLRGARANELRMTALGFPVFRYRLVACVIAGAFGGLAGILIANEGAYVSPAMMSWVKSGDLIVIVVLGGIGALFGPLYGAIVFFALEETLKPFLDLLHKGWGEYWQIVFGPLLVLIALHARGGMASLLRRRDG 317          
BLAST of mRNA_P-wetherbeei_contig5964.2.1 vs. uniprot
Match: A0A1H8W6A3_9PROT (Branched-chain amino acid transport system permease protein n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8W6A3_9PROT)

HSP 1 Score: 523 bits (1346), Expect = 6.420e-181
Identity = 280/304 (92.11%), Postives = 296/304 (97.37%), Query Frame = 1
Query:    1 MDYLLIQMLNGVQLGLLMFLLAAGLTLTFGIMDLVNLAHGSLYMMGAYLAWTLIGLTDSFVLGALLALPATFLLGVAVEAVVMRRLYARDHLDQVLATFGLILFFNELVRAVWGPAGKSIAVPAFLAHTVEILPGVLYPAYRFAIIVVGALVALLLAWLVARTRLGMLIRAGASNRRMIGALGVNIELLFSLVFGLGAVFAGLAGLMAAPISSVKIGMGDDILILAFVIIVIGGIGSIKGAFVAAMVVGQIDIVGRAFLPDFLKTFMSSAAASSAAPAISQVLVYVLMAGVLVWRPTGLFGQRT 912
            MDYLL+Q+LNGVQLGLLMFLLAAGLTLTFGIMDLVNLAHGSLYMMGAY+AW LIG TDSFVLGALLALPATFLLGV VEA+VMRRLY RDHL+QVLATFGLILFFNELVR +WGPAGKSIAVPAFL  TVEILPGV YPAYRFAIIVVGALVA+LLAWLVARTR+GMLIRAGASNRRMIGALGVNIELLF+LVFGLGAVFAGLAGLMAAPI+SVKIGMGDDILILAFVIIVIGGIGSIKGAFVAAMVVGQIDIVGRAFLPDFLKTF+S++AASSAAPAISQVL+Y++MAGVLVWRPTGLFGQRT
Sbjct:    1 MDYLLLQVLNGVQLGLLMFLLAAGLTLTFGIMDLVNLAHGSLYMMGAYIAWMLIGWTDSFVLGALLALPATFLLGVVVEAIVMRRLYVRDHLEQVLATFGLILFFNELVRVIWGPAGKSIAVPAFLNRTVEILPGVPYPAYRFAIIVVGALVAILLAWLVARTRIGMLIRAGASNRRMIGALGVNIELLFTLVFGLGAVFAGLAGLMAAPITSVKIGMGDDILILAFVIIVIGGIGSIKGAFVAAMVVGQIDIVGRAFLPDFLKTFLSASAASSAAPAISQVLIYIVMAGVLVWRPTGLFGQRT 304          
BLAST of mRNA_P-wetherbeei_contig5964.2.1 vs. uniprot
Match: A0A1F3A898_9PROT (ABC transporter permease n=8 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F3A898_9PROT)

HSP 1 Score: 521 bits (1341), Expect = 3.670e-180
Identity = 277/304 (91.12%), Postives = 295/304 (97.04%), Query Frame = 1
Query:    1 MDYLLIQMLNGVQLGLLMFLLAAGLTLTFGIMDLVNLAHGSLYMMGAYLAWTLIGLTDSFVLGALLALPATFLLGVAVEAVVMRRLYARDHLDQVLATFGLILFFNELVRAVWGPAGKSIAVPAFLAHTVEILPGVLYPAYRFAIIVVGALVALLLAWLVARTRLGMLIRAGASNRRMIGALGVNIELLFSLVFGLGAVFAGLAGLMAAPISSVKIGMGDDILILAFVIIVIGGIGSIKGAFVAAMVVGQIDIVGRAFLPDFLKTFMSSAAASSAAPAISQVLVYVLMAGVLVWRPTGLFGQRT 912
            MDYLL+QMLNGVQLGLLMFLLAAGLTLTFGIMDLVNLAHGSLYMMGAY+AWTLIG TDSFVLGA+LALP TFLLG+ VEAVVMRRLYARDHLDQVLATFGLILFFNELVR +WGPAGKSI+VP FL+HTVEILPG+ YPAYRFAII VGA+VA+LLAWLVARTR+GMLIRAGASNRRMI ALG+NIELLFSLVFGLGAVFA LAGLMAAP++SVKIGMGDDILILAFVIIVIGGIGSIKGAFVAAM+VGQIDIVGRAFLPDFLKTFMS+AAASSAAPAISQVLVYV+MAGVL+WRPTGLFGQRT
Sbjct:    1 MDYLLLQMLNGVQLGLLMFLLAAGLTLTFGIMDLVNLAHGSLYMMGAYIAWTLIGWTDSFVLGAILALPTTFLLGIVVEAVVMRRLYARDHLDQVLATFGLILFFNELVRVIWGPAGKSISVPQFLSHTVEILPGLPYPAYRFAIIAVGAVVAVLLAWLVARTRVGMLIRAGASNRRMIAALGINIELLFSLVFGLGAVFAALAGLMAAPLTSVKIGMGDDILILAFVIIVIGGIGSIKGAFVAAMLVGQIDIVGRAFLPDFLKTFMSTAAASSAAPAISQVLVYVVMAGVLIWRPTGLFGQRT 304          
BLAST of mRNA_P-wetherbeei_contig5964.2.1 vs. uniprot
Match: A0A1T4RLK3_9HYPH (Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4RLK3_9HYPH)

HSP 1 Score: 500 bits (1287), Expect = 5.380e-172
Identity = 270/304 (88.82%), Postives = 288/304 (94.74%), Query Frame = 1
Query:    1 MDYLLIQMLNGVQLGLLMFLLAAGLTLTFGIMDLVNLAHGSLYMMGAYLAWTLIGLTDSFVLGALLALPATFLLGVAVEAVVMRRLYARDHLDQVLATFGLILFFNELVRAVWGPAGKSIAVPAFLAHTVEILPGVLYPAYRFAIIVVGALVALLLAWLVARTRLGMLIRAGASNRRMIGALGVNIELLFSLVFGLGAVFAGLAGLMAAPISSVKIGMGDDILILAFVIIVIGGIGSIKGAFVAAMVVGQIDIVGRAFLPDFLKTFMSSAAASSAAPAISQVLVYVLMAGVLVWRPTGLFGQRT 912
            M+YL IQ+LNG+QLGLLMFLLAAGLTLTFGIMDLVNLAHGSLYMMGAY AWTLIG TDSFVLGALLA+PATFLLGV VE VV RRLYARDHL QVLATFGLILFFNELVRA+WGP GKSIAVPAFL HTVEILPG+ YPAYRFA+IVVG  VALLLAWLVARTRLGMLIRAGASNRRMIGALGVNIELLF+LVFGLGA FAGLAGLMAAPI+SVKIGMGDDILI+AFVIIVIGGIGSIKGAFVAA++VGQIDIVGRAFLPDFLKTF+  A+AS+AAPAISQVL+YV+MA VLVWRPTGLFGQR+
Sbjct:    1 MEYL-IQVLNGLQLGLLMFLLAAGLTLTFGIMDLVNLAHGSLYMMGAYFAWTLIGWTDSFVLGALLAIPATFLLGVVVEVVVARRLYARDHLAQVLATFGLILFFNELVRAIWGPDGKSIAVPAFLDHTVEILPGIPYPAYRFALIVVGTAVALLLAWLVARTRLGMLIRAGASNRRMIGALGVNIELLFTLVFGLGAAFAGLAGLMAAPIASVKIGMGDDILIVAFVIIVIGGIGSIKGAFVAALMVGQIDIVGRAFLPDFLKTFLDPASASAAAPAISQVLIYVVMAAVLVWRPTGLFGQRS 303          
BLAST of mRNA_P-wetherbeei_contig5964.2.1 vs. uniprot
Match: A0A537MT33_9PROT (Branched-chain amino acid ABC transporter permease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MT33_9PROT)

HSP 1 Score: 499 bits (1286), Expect = 7.900e-172
Identity = 270/303 (89.11%), Postives = 288/303 (95.05%), Query Frame = 1
Query:    1 MDYLLIQMLNGVQLGLLMFLLAAGLTLTFGIMDLVNLAHGSLYMMGAYLAWTLIGLTDSFVLGALLALPATFLLGVAVEAVVMRRLYARDHLDQVLATFGLILFFNELVRAVWGPAGKSIAVPAFLAHTVEILPGVLYPAYRFAIIVVGALVALLLAWLVARTRLGMLIRAGASNRRMIGALGVNIELLFSLVFGLGAVFAGLAGLMAAPISSVKIGMGDDILILAFVIIVIGGIGSIKGAFVAAMVVGQIDIVGRAFLPDFLKTFMSSAAASSAAPAISQVLVYVLMAGVLVWRPTGLFGQR 909
            M+YLLIQ+LNGVQLGLLMFLLAAGLTLTFGIMDLVNLAHGSLYM+GAYLAWT I  TDSF+LGALLALPATF++GV +E VV+RRLY RDHLDQVLATFGLILFFN+LVR VWGPAGKSIAVPAFL+HTV+ILPGV YPAYRFA+IVVG LVALLLAWLVARTRLGMLIRAGASNRRMI ALGVNIELLFSLVFGLGAVFA LAGLM APISSVKIGMGDDILILAFVIIVIGGIGSIKGAFVAAMVVGQIDI GRAFLP+ LK+F+S A+AS+AAPAISQVL+YVLMAGVLVWRPTGLFGQR
Sbjct:    1 MEYLLIQVLNGVQLGLLMFLLAAGLTLTFGIMDLVNLAHGSLYMIGAYLAWTFITWTDSFLLGALLALPATFIVGVILEVVVVRRLYGRDHLDQVLATFGLILFFNDLVRMVWGPAGKSIAVPAFLSHTVQILPGVSYPAYRFALIVVGLLVALLLAWLVARTRLGMLIRAGASNRRMIAALGVNIELLFSLVFGLGAVFACLAGLMTAPISSVKIGMGDDILILAFVIIVIGGIGSIKGAFVAAMVVGQIDIFGRAFLPELLKSFLSPASASAAAPAISQVLIYVLMAGVLVWRPTGLFGQR 303          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5964.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1H8W751_9PROT3.890e-20289.78Branched-chain amino acid transport system permeas... [more]
A0A1Q3KPZ5_9PROT7.130e-19788.09Branched-chain amino acid ABC transporter permease... [more]
A0A521MEG7_9HYPH1.010e-19687.23Branched-chain amino acid ABC transporter permease... [more]
A0A259MLP7_9PROT1.060e-19184.69Branched-chain amino acid ABC transporter permease... [more]
A0A1T4RLL5_9HYPH3.540e-18681.42Branched-chain amino acid transport system permeas... [more]
A0A537MT35_9PROT5.140e-18181.90Branched-chain amino acid ABC transporter permease... [more]
A0A1H8W6A3_9PROT6.420e-18192.11Branched-chain amino acid transport system permeas... [more]
A0A1F3A898_9PROT3.670e-18091.12ABC transporter permease n=8 Tax=Alphaproteobacter... [more]
A0A1T4RLK3_9HYPH5.380e-17288.82Amino acid/amide ABC transporter membrane protein ... [more]
A0A537MT33_9PROT7.900e-17289.11Branched-chain amino acid ABC transporter permease... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5964contigP-wetherbeei_contig5964:1218..3097 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1205680.CAKO01000002_gene2986
PFAMsBPD_transp_2
Model size1880
Max annot lvl204441|Rhodospirillales
KEGG koko:K01998
KEGG TC3.A.1.4
KEGG Pathwayko02010,ko02024,map02010,map02024
KEGG ModuleM00237
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.05e-202
EggNOG OGsCOG4177@1|root,COG4177@2|Bacteria,1MUPI@1224|Proteobacteria,2TSID@28211|Alphaproteobacteria,2JRJW@204441|Rhodospirillales
DescriptionBelongs to the binding-protein-dependent transport system permease family
Cds size1002
COG categoryE
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186878.4595687-CDS-P-wetherbeei_contig5964:1217..22191683186878.4595687-CDS-P-wetherbeei_contig5964:1217..2219Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5964 1218..2219 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186878.4718752-UTR-P-wetherbeei_contig5964:2219..30971683186878.4718752-UTR-P-wetherbeei_contig5964:2219..3097Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5964 2220..3097 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5964.2.1prot_P-wetherbeei_contig5964.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5964 1218..2219 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5964.2.1

>prot_P-wetherbeei_contig5964.2.1 ID=prot_P-wetherbeei_contig5964.2.1|Name=mRNA_P-wetherbeei_contig5964.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=334bp
MASDRTLRAKDMIAALRTPRGLITAVLLLVLAVLPLLTQAFDQRYLLSIG
TRIVIWSIAAVSLNMILGYGGLVSFGHAVFFGIGGYAVGILSANGLQSGW
LQWPVAIAASVLWAALVGALSLRTRGLYFIMITLAFAQLVFYVSAGLEAY
GADDGLNISRSRFPGLIDLRDKASFYWLCFVLLLGTLWFCSRFANSRFGF
VLRGAKSNDQRMMALGFPVFRYRLAAFILSGAFGGLAGILLANEGAYVSP
AMMSWVKSGDLIVIVVLGGMGTLFGPLYGTIAFFVLEESLKPLLDLGRKG
WGEYWQIVFGPMLILIALYAKGGIDSLLGRRRG*
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mRNA from alignment at P-wetherbeei_contig5964:1218..3097-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5964.2.1 ID=mRNA_P-wetherbeei_contig5964.2.1|Name=mRNA_P-wetherbeei_contig5964.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1880bp|location=Sequence derived from alignment at P-wetherbeei_contig5964:1218..3097- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACTATCTGTTGATCCAGATGCTGAACGGCGTGCAGCTCGGCCTGCT GATGTTCCTGCTCGCCGCCGGCCTCACGCTCACCTTCGGCATCATGGACC TCGTGAACCTGGCGCACGGGTCGCTCTACATGATGGGCGCCTACCTCGCC TGGACCCTGATCGGGCTCACCGACTCCTTCGTCCTCGGCGCGCTGCTGGC GCTGCCCGCCACGTTCTTGCTCGGTGTCGCGGTCGAGGCCGTGGTGATGC GGCGGCTCTATGCCCGCGACCATCTCGACCAGGTGCTGGCGACCTTCGGC CTGATCCTGTTCTTCAATGAACTGGTGCGCGCCGTCTGGGGGCCGGCCGG CAAGAGCATCGCGGTGCCGGCGTTCCTCGCCCACACCGTGGAGATCCTGC CCGGCGTGCTCTACCCCGCCTACCGCTTCGCCATCATCGTGGTCGGGGCC CTGGTGGCCCTCCTCCTCGCCTGGCTGGTGGCGCGCACGCGGCTTGGCAT GCTGATCCGCGCCGGCGCCTCCAACCGGCGCATGATCGGCGCGTTGGGCG TCAACATCGAGCTGCTGTTCAGCCTGGTGTTTGGCCTCGGCGCCGTCTTC GCCGGACTCGCCGGCCTGATGGCGGCGCCCATCAGCTCGGTTAAGATCGG CATGGGCGACGACATCCTGATCCTAGCCTTCGTCATCATCGTCATCGGCG GCATCGGCTCGATCAAGGGCGCGTTCGTGGCCGCCATGGTGGTGGGGCAG ATCGACATCGTCGGCCGCGCCTTCCTGCCTGATTTCCTGAAGACCTTCAT GAGTTCCGCCGCGGCCTCAAGTGCAGCGCCCGCGATCTCGCAGGTGCTGG TCTATGTGCTGATGGCCGGTGTCCTGGTATGGCGTCCGACCGGACTCTTC GGGCAAAGGACATGATCGCCGCGCTCCGCACACCGCGCGGCCTGATCACG GCCGTGCTCCTGTTGGTGCTGGCGGTGCTGCCGCTGCTGACGCAGGCCTT CGACCAGCGCTATCTGCTGTCGATCGGCACACGCATCGTCATCTGGTCGA TCGCCGCCGTCAGCCTCAACATGATCCTGGGCTATGGCGGGCTGGTGAGC TTCGGCCATGCCGTGTTCTTCGGCATCGGCGGTTATGCCGTCGGCATCCT GTCGGCCAATGGCCTGCAGAGTGGCTGGCTGCAATGGCCCGTCGCCATCG CCGCCTCGGTGCTGTGGGCGGCACTGGTGGGGGCGTTGTCGCTCCGGACC CGCGGCCTCTACTTCATCATGATCACGCTCGCGTTTGCCCAGCTCGTCTT CTACGTGAGCGCAGGACTGGAGGCCTATGGTGCCGACGACGGGCTCAACA TCAGCCGCAGCCGCTTCCCCGGCCTGATCGATTTGCGCGACAAGGCCTCG TTCTACTGGCTCTGCTTCGTGCTCCTGCTCGGCACGCTGTGGTTCTGCAG CCGCTTCGCCAACTCGCGCTTCGGCTTCGTGCTGCGCGGGGCCAAGTCGA ACGACCAGCGCATGATGGCTCTGGGCTTCCCGGTGTTCCGTTACCGTCTC GCCGCCTTCATCCTCTCCGGCGCTTTCGGCGGCCTGGCCGGCATCCTGCT CGCCAATGAGGGCGCCTATGTCTCGCCTGCCATGATGTCGTGGGTGAAGT CGGGTGACCTCATCGTCATCGTGGTGCTGGGTGGCATGGGCACGCTGTTC GGCCCGCTCTACGGCACCATCGCCTTCTTCGTGCTGGAGGAGTCGCTGAA GCCGCTGCTCGATCTCGGCCGCAAGGGCTGGGGCGAATATTGGCAGATCG TGTTCGGCCCGATGCTCATCTTGATCGCGCTCTATGCGAAGGGCGGGATC GATTCATTGCTGGGACGCCGCCGTGGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5964:1218..3097-

>mRNA_P-wetherbeei_contig5964.2.1 ID=mRNA_P-wetherbeei_contig5964.2.1|Name=mRNA_P-wetherbeei_contig5964.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1002bp|location=Sequence derived from alignment at P-wetherbeei_contig5964:1218..3097- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGTCCGACCGGACTCTTCGGGCAAAGGACATGATCGCCGCGCTCCG
CACACCGCGCGGCCTGATCACGGCCGTGCTCCTGTTGGTGCTGGCGGTGC
TGCCGCTGCTGACGCAGGCCTTCGACCAGCGCTATCTGCTGTCGATCGGC
ACACGCATCGTCATCTGGTCGATCGCCGCCGTCAGCCTCAACATGATCCT
GGGCTATGGCGGGCTGGTGAGCTTCGGCCATGCCGTGTTCTTCGGCATCG
GCGGTTATGCCGTCGGCATCCTGTCGGCCAATGGCCTGCAGAGTGGCTGG
CTGCAATGGCCCGTCGCCATCGCCGCCTCGGTGCTGTGGGCGGCACTGGT
GGGGGCGTTGTCGCTCCGGACCCGCGGCCTCTACTTCATCATGATCACGC
TCGCGTTTGCCCAGCTCGTCTTCTACGTGAGCGCAGGACTGGAGGCCTAT
GGTGCCGACGACGGGCTCAACATCAGCCGCAGCCGCTTCCCCGGCCTGAT
CGATTTGCGCGACAAGGCCTCGTTCTACTGGCTCTGCTTCGTGCTCCTGC
TCGGCACGCTGTGGTTCTGCAGCCGCTTCGCCAACTCGCGCTTCGGCTTC
GTGCTGCGCGGGGCCAAGTCGAACGACCAGCGCATGATGGCTCTGGGCTT
CCCGGTGTTCCGTTACCGTCTCGCCGCCTTCATCCTCTCCGGCGCTTTCG
GCGGCCTGGCCGGCATCCTGCTCGCCAATGAGGGCGCCTATGTCTCGCCT
GCCATGATGTCGTGGGTGAAGTCGGGTGACCTCATCGTCATCGTGGTGCT
GGGTGGCATGGGCACGCTGTTCGGCCCGCTCTACGGCACCATCGCCTTCT
TCGTGCTGGAGGAGTCGCTGAAGCCGCTGCTCGATCTCGGCCGCAAGGGC
TGGGGCGAATATTGGCAGATCGTGTTCGGCCCGATGCTCATCTTGATCGC
GCTCTATGCGAAGGGCGGGATCGATTCATTGCTGGGACGCCGCCGTGGCT
GA
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