mRNA_P-wetherbeei_contig5958.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5958.1.1 vs. uniprot
Match: D8LL88_ECTSI (Rab32B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL88_ECTSI) HSP 1 Score: 244 bits (624), Expect = 7.460e-75 Identity = 123/189 (65.08%), Postives = 145/189 (76.72%), Query Frame = 1
Query: 1 TMTCKILVVGNAKCGKSSIVRRFVENRFEVAYNSTVGADYIKKDILVPENDGRDGGEAADPECIRLQLWDIAGQDRFAHLTRAFFRRAKGALVVCGSDITRKGTFEAVSNWKAEIDAWCGAEGCSIPVFLLANKVDLLQDVHQSFLAGARIEKTCSEEGFAGWYITSARTGDNIEAAMTDLAARILKLE 567
T+TCK+LVVGNAKCGKSSI+ RFV NRF YNSTVGADY KD+ + EN GR +RLQLWDIAGQDRFA LTRA+FRRAKGA+VVC D+TR+GTF+A+ WK EID WC EGC +PV+L ANK DLL++V SFLAGAR+EKTC + GFAGW+ITSA+ GDNI+ AMT L L+ E
Sbjct: 349 TVTCKVLVVGNAKCGKSSIISRFVSNRFSSDYNSTVGADYAMKDVSL-EN-GRQ---------VRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVC--DVTREGTFDAIVRWKEEIDLWCQNEGCDLPVYLFANKCDLLKEVQDSFLAGARMEKTCRDAGFAGWHITSAKRGDNIDTAMTSLVEHALEAE 524
BLAST of mRNA_P-wetherbeei_contig5958.1.1 vs. uniprot
Match: A0A836CPW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPW2_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.260e-73 Identity = 115/181 (63.54%), Postives = 139/181 (76.80%), Query Frame = 1
Query: 1 TMTCKILVVGNAKCGKSSIVRRFVENRFEVAYNSTVGADYIKKDILVPENDGRDGGEAADPECIRLQLWDIAGQDRFAHLTRAFFRRAKGALVVCGSDITRKGTFEAVSNWKAEIDAWCGAEGCSIPVFLLANKVDLLQDVHQSFLAGARIEKTCSEEGFAGWYITSARTGDNIEAAMTDL 543
T+TCK+LVVGNAKCGK+SI++R+V RF Y +TVGADY+KKD+L P D C+RLQLWDIAGQDRFA LTRA+FRRA+ A+VVC DITR+GT+EAVS WK E+D WC EGC IPVFL+ANK DLL D +SFL GA++EKTC E+ F WYITSA+ GDNI AM++L
Sbjct: 362 TVTCKVLVVGNAKCGKTSIIQRYVHGRFTSEYTTTVGADYLKKDVLAP-----------DGTCVRLQLWDIAGQDRFARLTRAYFRRARAAVVVC--DITREGTYEAVSRWKDELDVWCTTEGCKIPVFLIANKCDLLTDAQESFLMGAKMEKTCREKNFEAWYITSAKGGDNIATAMSNL 529
BLAST of mRNA_P-wetherbeei_contig5958.1.1 vs. uniprot
Match: W7U2E0_9STRA (Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2E0_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.800e-62 Identity = 105/185 (56.76%), Postives = 131/185 (70.81%), Query Frame = 1
Query: 10 CKILVVGNAKCGKSSIVRRFVENRFEVAYNSTVGADYIKKDILVPENDGRDGGEAADPECIRLQLWDIAGQDRFAHLTRAFFRRAKGALVVCGSDITRKGTFEAVSNWKAEIDAWCGAEGCS--IPVFLLANKVDLLQDVHQSFLAGARIEKTCSEEGFAGWYITSARTGDNIEAAMTDLAARIL 558
CK+LVVGNAKCGK+S++RRFV+ F+ AY STVGADY+K+D+++ DGR +RLQLWDIAGQDRF HLTR +F RAKG LVVC D+TR+ TFEAV +WK EID W EG IPV L+ANK D+L D SF+AGA + C E+ FA WY+TSA++G N+E A DL R +
Sbjct: 232 CKLLVVGNAKCGKTSVIRRFVQGNFKNAYVSTVGADYLKRDVIL--KDGRP---------VRLQLWDIAGQDRFVHLTRVYFTRAKGVLVVC--DLTREKTFEAVRSWKLEIDEWARTEGREGGIPVVLIANKCDMLTDAADSFVAGANMASMCHEQKFASWYVTSAKSGSNVETAFLDLVERAM 403
BLAST of mRNA_P-wetherbeei_contig5958.1.1 vs. uniprot
Match: A0A8K1FMK4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMK4_PYTOL) HSP 1 Score: 161 bits (407), Expect = 3.970e-45 Identity = 87/189 (46.03%), Postives = 120/189 (63.49%), Query Frame = 1
Query: 13 KILVVGNAKCGKSSIVRRFVENRFEVAYNSTVGADYIKKDILVPENDGRDGGEAADPECIRLQLWDIAGQDRFAHLTRAFFRRAKGALVVCGSDITRKGTFEAVSNWKAEIDAWCGA--EGCSIPVFLLANKVDLLQDVHQSFLAGARIEKTCSEEGFAGWYITSARTGDNIEAAMTDLAARILKLERE 573
K+LVVGNA+CGK+S +RRFV +F Y ST+GAD+++K I + D + LQLWDIAGQDRFA LTRA+FR AKGAL+VC DITR T +AV WK E+D C G +IPV +LANK DLLQD + G ++K+ + G W+ SA++G++I+ A L ++++ R+
Sbjct: 97 KVLVVGNARCGKTSTIRRFVSKQFSDHYVSTIGADFVEKVI-----------DYDDSLRLHLQLWDIAGQDRFAKLTRAYFREAKGALIVC--DITRANTIDAVETWKNELDVCCKDLNHGETIPVVMLANKSDLLQDPLSALNLGVNMQKSVTRNGIVEWFRASAKSGEHIDEAFQCLIEQMVQAHRQ 272
BLAST of mRNA_P-wetherbeei_contig5958.1.1 vs. uniprot
Match: A0A485L1R9_9STRA (Aste57867_14854 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1R9_9STRA) HSP 1 Score: 157 bits (396), Expect = 6.950e-44 Identity = 83/182 (45.60%), Postives = 115/182 (63.19%), Query Frame = 1
Query: 13 KILVVGNAKCGKSSIVRRFVENRFEVAYNSTVGADYIKKDILVPENDGRDGGEAADPECIRLQLWDIAGQDRFAHLTRAFFRRAKGALVVCGSDITRKGTFEAVSNWKAEIDAWCGAEGCS-----IPVFLLANKVDLLQDVHQSFLAGARIEKTCSEEGFAGWYITSARTGDNIEAAMTDL 543
K+LVVG AK GK+S++RR V N F Y +TVGADY +K + + +A C+ Q+WDIAGQDRFA LTR +F A GA++VC DIT + T AV +WK E+DAWCG E + +PV L+ANK DLL D+ + +G ++K +E G W+ SA++G+ ++AAMT L
Sbjct: 63 KVLVVGMAKSGKTSLIRRLVHNTFSDEYKTTVGADYFEKTVPI---------DARTHACV--QIWDIAGQDRFAKLTRRYFSNADGAIIVC--DITSEYTIHAVMDWKRELDAWCGFEHPTDANKLLPVILVANKCDLLVDIATALESGITMQKMVTETGIDEWFRVSAKSGEKVDAAMTTL 231
BLAST of mRNA_P-wetherbeei_contig5958.1.1 vs. uniprot
Match: A0A7S0CY77_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CY77_9EUKA) HSP 1 Score: 162 bits (410), Expect = 7.910e-44 Identity = 88/185 (47.57%), Postives = 111/185 (60.00%), Query Frame = 1
Query: 13 KILVVGNAKCGKSSIVRRFVENRFEVAYNSTVGADYIKKDILVPENDGRDGGEAADPECIRLQLWDIAGQDRFAHLTRAFFRRAKGALVVCGSDITRKGTFEAVSNWKAEIDAWCGAE--GCSIPVFLLANKVDLLQDVHQSFLAGARIEKTCSEEGFAGWYITSARTGDNIEAAMTDLAARILK 561
KILVVGN+KCGK+SI+ RFV F Y T+G DY KDI P RLQLWDIAGQDRF + R FFR A GA+VVC D+ RK + +A WK E++ E G +P L+ANKVD L DVHQSF+ GA ++KT ++ F GW+I SA+ +NI A++ L I K
Sbjct: 279 KILVVGNSKCGKTSIINRFVNGAFSEDYRYTIGCDYSTKDIRDPSTG----------ITTRLQLWDIAGQDRFIQMNRPFFRNAVGAIVVC--DVARKASIDAACLWKTELERCLSPEEVGFRVPTILIANKVDTLSDVHQSFVIGAYVQKTALKKKFDGWFIGSAKRDENINEAISFLIQAIEK 451
BLAST of mRNA_P-wetherbeei_contig5958.1.1 vs. uniprot
Match: K3X7B8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7B8_GLOUD) HSP 1 Score: 159 bits (401), Expect = 8.480e-44 Identity = 89/190 (46.84%), Postives = 123/190 (64.74%), Query Frame = 1
Query: 1 TMTCKILVVGNAKCGKSSIVRRFVENRFEVAYNSTVGADYIKKDILVPENDGRDGGEAADPECIRLQLWDIAGQDRFAHLTRAFFRRAKGALVVCGSDITRKGTFEAVSNWKAEIDAWCGAE---GCSIPVFLLANKVDLLQDVHQSFLAGARIEKTCSEEGFAGWYITSARTGDNIEAAMTDLAARILK 561
T+ K+L+VGNA+CGK+S +R+FV +F Y ST+GAD+++K I E D + I LQLWDIAGQDRFA LTRA+FR AKGAL+VC DITR+ T +A+ NWK+EID C + G SIPV ++ANK DLL D + G ++K + G W+ TSA+ GD+++ A L R+++
Sbjct: 123 TVIMKVLIVGNARCGKTSTIRQFVSKQFSENYVSTIGADFVEKII---EYDAQ--------LKISLQLWDIAGQDRFAKLTRAYFREAKGALIVC--DITRENTIDAIVNWKSEIDL-CSRDLNDGESIPVVMVANKSDLLDDPVGALNIGVNMQKCVVKNGIVEWFRTSAKNGDSVDDAFKCLIDRMVE 298
BLAST of mRNA_P-wetherbeei_contig5958.1.1 vs. uniprot
Match: A0A5D6Y1Q7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Q7_9STRA) HSP 1 Score: 159 bits (402), Expect = 9.840e-44 Identity = 87/178 (48.88%), Postives = 119/178 (66.85%), Query Frame = 1
Query: 1 TMTCKILVVGNAKCGKSSIVRRFVENRFEVAYNSTVGADYIKKDILVPENDGRDGGEAADPECIRLQLWDIAGQDRFAHLTRAFFRRAKGALVVCGSDITRKGTFEAVSNWKAEIDAWCGAE---GCSIPVFLLANKVDLLQDVHQSFLAGARIEKTCSEEGFAGWYITSARTGDNIE 525
T+ K+LVVGNA+CGK+S +R+FV +F +Y ST+GAD+++K I E D + I LQLWDIAGQDRFA LTRA+FR AKGAL+VC DITR+ T +AV+ WK EIDA C + G +PV ++ANK DLL DV + G R++K + G W+ SA++GD+++
Sbjct: 152 TVIMKVLVVGNARCGKTSTIRQFVSRQFSESYVSTIGADFVEKVI---EYDAQ--------LKISLQLWDIAGQDRFAKLTRAYFRDAKGALIVC--DITRENTVDAVTTWKREIDA-CARDLNGGEPVPVVMVANKSDLLDDVVGALNIGVRMQKCVASNGILEWFRASAKSGDSVD 315
BLAST of mRNA_P-wetherbeei_contig5958.1.1 vs. uniprot
Match: A0A3R7NCY6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NCY6_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.080e-43 Identity = 82/186 (44.09%), Postives = 114/186 (61.29%), Query Frame = 1
Query: 13 KILVVGNAKCGKSSIVRRFVENRFEVAYNSTVGADYIKKDILVPENDGRDGGEAADPECIRLQLWDIAGQDRFAHLTRAFFRRAKGALVVCGSDITRKGTFEAVSNWKAEIDAWCGA--EGCSIPVFLLANKVDLLQDVHQSFLAGARIEKTCSEEGFAGWYITSARTGDNIEAAMTDLAARILKL 564
K+L+VGNA+CGK+S +RRF ++ F Y ST+GAD+++K I E D I LQLWDIAGQDRFA TR +FR AKGA++VC DITR T EAV NWK EID C +G IPV ++ANK DLL + + G ++K ++ W+ SA++G+ + A L R++++
Sbjct: 61 KVLIVGNARCGKTSTIRRFTQDNFNEEYVSTIGADFVEKVI-----------EYDDQLTISLQLWDIAGQDRFAKFTRGYFREAKGAVIVC--DITRANTIEAVENWKNEIDMCCKDLNDGTEIPVVMVANKSDLLVNPMDALDLGVNMQKCVAKNNIVEWFRASAKSGEKVPDAFQCLVDRMIEI 233
BLAST of mRNA_P-wetherbeei_contig5958.1.1 vs. uniprot
Match: G4ZV73_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZV73_PHYSP) HSP 1 Score: 154 bits (388), Expect = 2.440e-43 Identity = 87/194 (44.85%), Postives = 117/194 (60.31%), Query Frame = 1
Query: 13 KILVVGNAKCGKSSIVRRFVENRFEVAYNSTVGADYIKKDILVPENDGRDGGEAADPECIRLQLWDIAGQDRFAHLTRAFFRRAKGALVVCGSDITRKGTFEAVSNWKAEIDAWCGA--EGCSIPVFLLANKVDLLQDVHQSFLAGARIEKTCSEEGFAGWYITSARTGDNIEAAMTDLAARI---LKLEREAE 579
K+L+VGNA+CGK+S +RRF ++ F Y ST+GAD+++K I E+ I LQLWDIAGQDRFA TR +FR AKGA++VC DITR T +AV NWK EID C EG IPV ++ANK DLL D + G ++K + W+ SA++G++I A L R+ L+ E+E E
Sbjct: 2 KVLIVGNARCGKTSTIRRFTQDEFNEEYVSTIGADFVEKIIEYDEH-----------LTISLQLWDIAGQDRFAKFTRGYFREAKGAVIVC--DITRANTIDAVVNWKNEIDTCCKDLNEGAEIPVVMVANKSDLLMDPMGALDLGVNMQKCVDKNKIVEWFRASAKSGEHIGDAFQCLIDRMVVDLRAEKEVE 182 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5958.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5958.1.1 >prot_P-wetherbeei_contig5958.1.1 ID=prot_P-wetherbeei_contig5958.1.1|Name=mRNA_P-wetherbeei_contig5958.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=206bp MTCKILVVGNAKCGKSSIVRRFVENRFEVAYNSTVGADYIKKDILVPENDback to top mRNA from alignment at P-wetherbeei_contig5958:1788..2988+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5958.1.1 ID=mRNA_P-wetherbeei_contig5958.1.1|Name=mRNA_P-wetherbeei_contig5958.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1201bp|location=Sequence derived from alignment at P-wetherbeei_contig5958:1788..2988+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5958:1788..2988+ >mRNA_P-wetherbeei_contig5958.1.1 ID=mRNA_P-wetherbeei_contig5958.1.1|Name=mRNA_P-wetherbeei_contig5958.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=618bp|location=Sequence derived from alignment at P-wetherbeei_contig5958:1788..2988+ (Phaeothamnion wetherbeei SAG_119_79)back to top |