mRNA_P-wetherbeei_contig5955.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5955.4.2 vs. uniprot
Match: A0A5D6XQ34_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ34_9STRA) HSP 1 Score: 102 bits (254), Expect = 6.490e-25 Identity = 61/160 (38.12%), Postives = 82/160 (51.25%), Query Frame = 1
Query: 25 LKFALVGACWGCTNPLLKRGCNVDST--AATDPKHGGLRWLLDPLKSFRRPTVLIPYAVNQAGSALYWYLIASEGTFPQRLLCSRQSLYKRDAIESRPLWLSLCTDLSMAVPICNSLTFVFTALTGAALGEAFRRPLVAWGGIALVLCGTAFCISAQKEH 498
L F VGA WGCTNPL+KRG D T A + LR LL +K++R ++P+ +NQ+GSA Y YL+ S ++S AVPICNSLTFVFTA+T LGEA +RP+ + G+ L+L G C ++
Sbjct: 6 LSFLFVGALWGCTNPLIKRGSAADLTYSRANNSPAEFLRQLLHWIKNWR---FVVPFVLNQSGSAAYVYLLGS-------------------------------AEISSAVPICNSLTFVFTAITSRLLGEAPKRPIWTYTGMVLILLGVLICFDSKNNQ 131
BLAST of mRNA_P-wetherbeei_contig5955.4.2 vs. uniprot
Match: A0A484E0X9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0X9_BRELC) HSP 1 Score: 102 bits (254), Expect = 1.160e-24 Identity = 59/155 (38.06%), Postives = 85/155 (54.84%), Query Frame = 1
Query: 25 LKFALVGACWGCTNPLLKRGCNVDSTAATDPKHGGLRWLLDPLKSFRRPTVLIPYAVNQAGSALYWYLIASEGTFPQRLLCSRQSLYKRDAIESRPLWLSLCTDLSMAVPICNSLTFVFTALTGAALGEAFRRPLVAWGGIALVLCGTAFCISAQ 489
L F VGA WGCTNP +KRG N + T + ++ + R ++P+A+NQ+GS Y YL+ S GTFP L + + + + + D+S AVPICNSLTFVFTA+T LGE +R + + G+ L+L G A C ++
Sbjct: 6 LSFLFVGALWGCTNPFIKRGSN-NKCIYTRKDNSIGEYVKLVVGLVRNWQFMLPFALNQSGSIFYVYLLGSAGTFPLTLNGEGNTGLRLN-------FFLVAIDISNAVPICNSLTFVFTAITSRLLGEKPQRSVSTYTGVVLILLGVAICYDSK 152
BLAST of mRNA_P-wetherbeei_contig5955.4.2 vs. uniprot
Match: G4Z987_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4Z987_PHYSP) HSP 1 Score: 100 bits (249), Expect = 3.990e-24 Identity = 60/167 (35.93%), Postives = 86/167 (51.50%), Query Frame = 1
Query: 1 LSPNMALPLKFALVGACWGCTNPLLKRGCNVDS--TAATDPKHGGLRWLLDPLKSFRRPTVLIPYAVNQAGSALYWYLIASEGTFPQRLLCSRQSLYKRDAIESRPLWLSLCTDLSMAVPICNSLTFVFTALTGAALGEAFRRPLVAWGGIALVLCGTAFCISAQKE 495
+S + L F VGA WGCTNPL+KRG + D T + + LLD +K+++ L+P+A+NQ+GS Y +L+ S TD+S AVPICNSL FVFTA+T LGE +RP+ + G+ L+L G A C +++
Sbjct: 1 MSSALTTLLSFLFVGALWGCTNPLIKRGSDADVMYTRKDNSLEEMKKQLLDLMKNWQ---FLLPFALNQSGSVAYVFLLGS-------------------------------TDVSNAVPICNSLAFVFTAITSRLLGEQPQRPISTYTGMTLILTGVAICFDSKQN 133
BLAST of mRNA_P-wetherbeei_contig5955.4.2 vs. uniprot
Match: A0A225WLS3_9STRA (Putative membrane protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WLS3_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.640e-23 Identity = 58/165 (35.15%), Postives = 84/165 (50.91%), Query Frame = 1
Query: 1 LSPNMALPLKFALVGACWGCTNPLLKRGCNVDSTAATDPKHGGLRWLLDPLKSFRRPTVLIPYAVNQAGSALYWYLIASEGTFPQRLLCSRQSLYKRDAIESRPLWLSLCTDLSMAVPICNSLTFVFTALTGAALGEAFRRPLVAWGGIALVLCGTAFCISAQKE 495
+S ++ L F VGA WGCTNPL+KRG N DS T + + + + ++P+A+NQ+GS +Y YL+ S D+S AVPICNSLTFVFTA+T LGE +RP+ + G+ L+L G A C ++++
Sbjct: 1 MSSTISTLLSFLFVGALWGCTNPLIKRGSN-DSVMYTRKSNSVGEFGKQLIGLVKNWQFVLPFALNQSGSVVYVYLLGS-------------------------------ADISNAVPICNSLTFVFTAITSRLLGEKPQRPVSTYTGMFLILLGVAICFDSKQQ 133
BLAST of mRNA_P-wetherbeei_contig5955.4.2 vs. uniprot
Match: A0A3R7KFJ3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KFJ3_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 3.460e-23 Identity = 56/166 (33.73%), Postives = 84/166 (50.60%), Query Frame = 1
Query: 1 LSPNMALPLKFALVGACWGCTNPLLKRGCNVDSTAATDPKHGGLR-WLLDPLKSFRRPTVLIPYAVNQAGSALYWYLIASEGTFPQRLLCSRQSLYKRDAIESRPLWLSLCTDLSMAVPICNSLTFVFTALTGAALGEAFRRPLVAWGGIALVLCGTAFCISAQKE 495
+S + L F VGA WGCTNPL+KRG D A K ++ ++ + + ++P+ +NQ+GS +Y YL+ S D+S AVPICNSLTFVFTA+T LGE +RP+ + G+ L+L G A C +++++
Sbjct: 1 MSSTTSTLLSFLFVGALWGCTNPLIKRGKRSDDDAMYARKDNSVQEFVKQVVHLVKNWQFVLPFILNQSGSVVYVYLLGS-------------------------------ADISNAVPICNSLTFVFTAITSRLLGEKPQRPISTYTGMVLILLGVAICFNSKQD 135
BLAST of mRNA_P-wetherbeei_contig5955.4.2 vs. uniprot
Match: D0MUD0_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MUD0_PHYIT) HSP 1 Score: 97.8 bits (242), Expect = 4.380e-23 Identity = 57/165 (34.55%), Postives = 82/165 (49.70%), Query Frame = 1
Query: 1 LSPNMALPLKFALVGACWGCTNPLLKRGCNVDSTAATDPKHGGLRWLLDPLKSFRRPTVLIPYAVNQAGSALYWYLIASEGTFPQRLLCSRQSLYKRDAIESRPLWLSLCTDLSMAVPICNSLTFVFTALTGAALGEAFRRPLVAWGGIALVLCGTAFCISAQKE 495
+S + L F VGA WGCTNPL+KRG N D T + + + + ++P+A+NQ+GS +Y YL+ S D+S AVPICNSLTFVFTA+T LGE +RP + G+ L+L G A C +++++
Sbjct: 1 MSSTVPTLLSFLFVGALWGCTNPLIKRGSN-DDVMYTRKDNSIGEFTKQAVGIVKNWQFVLPFALNQSGSVVYVYLLGS-------------------------------ADISNAVPICNSLTFVFTAITSRLLGEKPQRPASTYTGMVLILLGVAICFNSKQD 133
BLAST of mRNA_P-wetherbeei_contig5955.4.2 vs. uniprot
Match: A0A7S1UNM3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNM3_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 4.100e-22 Identity = 56/158 (35.44%), Postives = 81/158 (51.27%), Query Frame = 1
Query: 10 NMALPLKFALVGACWGCTNPLLKRGCNVDSTAATDPKHGGLRWLLDPLKSFRRPTVLIPYAVNQAGSALYWYLIASEGTFPQRLLCSRQSLYKRDAIESRPLWLSLCTDLSMAVPICNSLTFVFTALTGAALGEAFRRPLVAWGGIALVLCGTAFCIS 483
+ + L LVGA WGCTNPLL++G ++T A + +H LL L FR V +PY +NQ+GS LY+ L+A+ +DL++AVPICN+L+ VF+ T LGE +PL A G A+V+ G C++
Sbjct: 2 ELKIILSLILVGAFWGCTNPLLRKGSTAEATDAAEGEHSSSS-LLTTLSRFRNWKVWLPYLLNQSGSLLYYVLLAN-------------------------------SDLTLAVPICNALSLVFSMGTSHLLGERVDKPLRAGLGAAMVMMGVTLCVT 127
BLAST of mRNA_P-wetherbeei_contig5955.4.2 vs. uniprot
Match: A0A448Z7G1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7G1_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 3.720e-21 Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 1
Query: 25 LKFALVGACWGCTNPLLKRGCN--VDSTAATDPK--------HGGLRWLLDPLKSFRRPTVLIPYAVNQAGSALYWYLIASEGTFPQRLLCSRQSLYKRDAIESRPLWLSLCTDLSMAVPICNSLTFVFTALTGAALGEAFRRPLVAWGGIALVLCGTAFCISAQKEH 498
L LVGA WGCTNPLL++G + +S++A P +L+ L+SF V +PY +NQ+GS +++ L+A+ +D+SMAVPICN++ +F+ LT + LGE ++PL G L++ G A C+S+Q EH
Sbjct: 9 LSMLLVGALWGCTNPLLRKGSSDAEESSSAKRPDASDDGSXXDSSSSFLVSSLRSFANVGVWLPYVLNQSGSIVFYVLLAN-------------------------------SDISMAVPICNAMALLFSFLTSSLLGEPIQKPLRTGAGAFLIMVGVAICVSSQ-EH 144
BLAST of mRNA_P-wetherbeei_contig5955.4.2 vs. uniprot
Match: W2P4A6_PHYPR (BCNT-C domain-containing protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2P4A6_PHYPR) HSP 1 Score: 96.7 bits (239), Expect = 9.750e-21 Identity = 57/164 (34.76%), Postives = 83/164 (50.61%), Query Frame = 1
Query: 1 LSPNMALPLKFALVGACWGCTNPLLKRGCNVDSTAATDPKHGGLRWLLDPLKSFRRPTVLIPYAVNQAGSALYWYLIASEGTFPQRLLCSRQSLYKRDAIESRPLWLSLCTDLSMAVPICNSLTFVFTALTGAALGEAFRRPLVAWGGIALVLCGTAFCISAQK 492
+S ++ L F VGA WGCTNPL+KRG + D+ T + + + R ++P+A+NQ+GS +Y YL+ S D+S AVPICNSLTFVFTA+T LGE +RP + G+ L+L G A C ++++
Sbjct: 1 MSSTVSTLLSFLFVGALWGCTNPLIKRGSD-DNVIYTRKDNSVGEFAKQLVGLVRNWQFVLPFALNQSGSVVYVYLLGS-------------------------------ADISNAVPICNSLTFVFTAITSRLLGEKPQRPASTYTGMVLILLGVAICFNSKQ 132
BLAST of mRNA_P-wetherbeei_contig5955.4.2 vs. uniprot
Match: K3WLG6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLG6_GLOUD) HSP 1 Score: 90.9 bits (224), Expect = 2.150e-20 Identity = 53/156 (33.97%), Postives = 77/156 (49.36%), Query Frame = 1
Query: 25 LKFALVGACWGCTNPLLKRGCNVDSTAATDPKHGGLRWLLDPLKSFRRPTVLIPYAVNQAGSALYWYLIASEGTFPQRLLCSRQSLYKRDAIESRPLWLSLCTDLSMAVPICNSLTFVFTALTGAALGEAFRRPLVAWGGIALVLCGTAFCISAQK 492
L F VGA WGCTNPL+KRG D T T + ++ + + ++P+A+NQ+GS Y +L+ S ++S AVPICNSLTFVFTA+T LGE +RP+ + G+ L+L G C +++
Sbjct: 10 LSFLFVGALWGCTNPLIKRGSAEDLTY-TRKDNSFAEFVCQLVHWVKNWRFVVPFALNQSGSIAYVHLLGS-------------------------------AEISNAVPICNSLTFVFTAITSRLLGEKPKRPVWTYSGMVLILLGVVICFNSKN 133 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5955.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5955.4.2 >prot_P-wetherbeei_contig5955.4.2 ID=prot_P-wetherbeei_contig5955.4.2|Name=mRNA_P-wetherbeei_contig5955.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=163bp MALPLKFALVGACWGCTNPLLKRGCNVDSTAATDPKHGGLRWLLDPLKSFback to top mRNA from alignment at P-wetherbeei_contig5955:2414..3007+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5955.4.2 ID=mRNA_P-wetherbeei_contig5955.4.2|Name=mRNA_P-wetherbeei_contig5955.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=594bp|location=Sequence derived from alignment at P-wetherbeei_contig5955:2414..3007+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5955:2414..3007+ >mRNA_P-wetherbeei_contig5955.4.2 ID=mRNA_P-wetherbeei_contig5955.4.2|Name=mRNA_P-wetherbeei_contig5955.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=489bp|location=Sequence derived from alignment at P-wetherbeei_contig5955:2414..3007+ (Phaeothamnion wetherbeei SAG_119_79)back to top |