mRNA_P-wetherbeei_contig5949.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5949.2.1
Unique NamemRNA_P-wetherbeei_contig5949.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5949.2.1 vs. uniprot
Match: A0A819GVJ2_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A819GVJ2_9BILA)

HSP 1 Score: 169 bits (428), Expect = 7.260e-42
Identity = 125/334 (37.43%), Postives = 172/334 (51.50%), Query Frame = 3
Query:  459 LLQPMDRLSHPCDYRDFDADLILVHGLGGDPNT-WENEIPGHDKFQWIPFWLLDE---MRGRNCCYGIYELLNGRCKYPDVPALPPARRVRVLVVKHGATLKGTGDDADPQKIAINLAGALAEAGVGAKPVVWLTHSLGGLITKELLKFAAESRANDLTRIVASTKGIVFYGTPHHG----NILLGAAEKLFRTTPAGRYMDPSV-------SRVHLAELNGILAPGGAAAKIEILNFIEGSKVPLLWGGWGESTVIVPDADARLSREAGFVNDVDDRGNSRVSTAQAEHTPLPWRVNVVVEDRHHNDIHKPPKIEHVTFSFVRSYVARWLALR 1415
            +LQP+ R+ +P D   F+AD+ILVHGLGGD  T W N         W   WLLD    +RG    YGI +L             P A ++RVL V H + +  +  D+DP  IA  L   L  AGVG+KP+VW+THSLGGLI KE+L FA+++       +  STKG+VF+GTPH G    ++L  +A  + ++    RY+DPS        +R+ L  LN   A       I  LNF EG   P L   +  +  +V +A A ++   G +       NSR    Q     LP RV++   DR+H +I +PP   H T+   R+YVA WL  R
Sbjct:    1 MLQPVARIWNPTD---FEADIILVHGLGGDSRTTWTNSAG-----DWPINWLLDSQVGIRGMLTQYGIQDL-------------PQANKIRVLTVSHRSDMFNSDADSDPYNIATQLIRHLFHAGVGSKPIVWITHSLGGLIIKEILLFASKNEIR--IDMFNSTKGVVFFGTPHCGATWASVLRHSAPSMHQSLGL-RYLDPSPDTGEGAGNRLRLDTLNTFFARNN----IPFLNFSEGMVWPQLANRF--NITVVTEAQAYIT---GAIV-----ANSRELGEQMALGILPPRVHIHCSDRNHLNIARPPSQNHSTYRLTRAYVANWLQRR 296          
BLAST of mRNA_P-wetherbeei_contig5949.2.1 vs. uniprot
Match: A0A814UZ82_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814UZ82_9BILA)

HSP 1 Score: 172 bits (435), Expect = 5.460e-41
Identity = 154/467 (32.98%), Postives = 225/467 (48.18%), Query Frame = 3
Query:   57 IYHGQDLPVPEPRSVGGFFWKWKDMADAWVDSH-VSAPRGQLFQLQRRQWAFGFVDRPFRILL--LLDTGEQMVTLEAVSVQM-ARNALRALKLYVFETSDYSNGGG---ALRTRLATVKELPDFQYASLLDANTVRFPSSLLQPMDRLSHPCDYRDFDADLILVHGLGGDP-NTWENEIPGHDKFQWIPFWLLDEMRGRNCCYGIYELLNGRCKYPDVPALPPARRVRVLVVKHGATLKGTGDDADPQKIAINLAGALAEAGVGAKPVVWLTHSLGGLITKELLKFAAESRANDLTRIVASTKGIVFYGTPHHGNILLGAAEKL--FRTTPAGRYMD--PSV--SRVHLAELNGILAPGGAAAKIEILNFIEGSKVPLLWGGWGESTVIVPDADARLSREAGFVNDVDDRGNSRVSTAQAEHTPLPWRVNVVVEDRHHNDIHKPPKIEHVTFSFVRSYVARWLALR 1415
            + H ++LP        GF   WKD +D  +++  V    G ++ L + Q  +  + R +RI+L        Q+  +E  S +  AR A ++L + V +  D  +      ALR     V+    FQ+      N  RFP  +LQP     +P +   F+AD+I +HGL G   +TW N++       W   WLLD   G        E +  + K   +  LP   ++R+L V H A      D++DP  IA +L   L  AGVG+KPV+WLTHSLGGLI KE+L FA+E        I  STKG+VF+GTPH+G        ++   R + A  Y+D  PSV  +  +LA LN  L      + I  LNF EG+  P L+  W    +IV DA AR++    F+ +      ++   AQ     +P RV+      HH +I KP      T+ + R YVA W+ LR
Sbjct:   16 VGHWENLP--------GFLSFWKDRSDPDIETRCVLNADGSVYPLFKLQ--YHILQRGYRIVLRDYYPAERQITVIEKCSSEPDARLAYQSLVVSVLQDKDMVSPESVETALRRHNTPVQGR--FQHVGNPANN--RFPEPMLQPFRSSWNPVN---FEADIIFIHGLDGHAESTWTNDLG-----LWPIIWLLDSDHG-------IESVRNQFK---IGQLPRRNKIRMLSVSHHAGSFADDDESDPVIIARHLVRLLFHAGVGSKPVIWLTHSLGGLIVKEVLHFASEHETR--RDIFTSTKGVVFFGTPHNGASWATTQRQVTRMRNSKALFYLDCAPSVGTNAGNLARLNS-LNEFFLNSNIPFLNFSEGTITPRLFD-WLVQPIIVSDAQARMNGPDTFIIE------AKELAAQIALGKIPARVHYYYPTSHHLNIAKPSDRLEPTYYYTRIYVANWIQLR 440          
BLAST of mRNA_P-wetherbeei_contig5949.2.1 vs. uniprot
Match: A0A816GR98_9BILA (Hypothetical protein n=1 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816GR98_9BILA)

HSP 1 Score: 125 bits (315), Expect = 2.210e-28
Identity = 84/215 (39.07%), Postives = 114/215 (53.02%), Query Frame = 3
Query:  261 QMVTLEAVSVQMARNALRALKLYVFETSDYSNGGGALRTRLATVKELPDFQYASLLDANTVRFPSSLLQPMDRLSHPCDYRDFDADLILVHGLGGDPN-TWENEIPGHDKFQWIPFWLLDEMRGRNCCYGIYELLNGRCKYPDVPALPPARRVRVLVVKHGATLKGTGDDADPQKIAINLAGALAEAGVGAKPVVWLTHSLGGLITKELLKFAAE 902
            Q+  ++A S   AR   + L   V    D +N    +R  L + + +   +  SL+++   RFP  LLQP DR  +P +   F+AD+ILVHGLGGD   TW N         W   WLLD   G     G Y + +          LPP  ++RVL V H A +  T  +++P  IA  LAG L  AGVG+KPV+WL HSLGGLI KE+L FA++
Sbjct:   75 QVTIIQADSEHNARLGYQHLVHMVLSEDDVANPE-TVRLALESRQIMHPSRLQSLVNSLINRFPEPLLQPFDRRWNPAE---FEADIILVHGLGGDSQATWTNAAG-----LWPVIWLLDSHIGIRSMLGQYNISD----------LPPENKIRVLTVSHNAAMFNTNAESNPIYIADRLAGLLLHAGVGSKPVIWLAHSLGGLIVKEVL-FASQ 269          
BLAST of mRNA_P-wetherbeei_contig5949.2.1 vs. uniprot
Match: A0A2V0P6L5_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P6L5_9CHLO)

HSP 1 Score: 94.0 bits (232), Expect = 9.030e-16
Identity = 88/314 (28.03%), Postives = 134/314 (42.68%), Query Frame = 3
Query:  516 DLILVHGLGGDPN-TWENEIPGHDKFQWIPFWLLDEMRGRNCCYGI--YELLNGRCKYPDVPALPPARRVRVLVVKHGATLKG-TGDDADPQKIAINLAGALAEAGVGAKPVVWLTHSLGGLITKELLKFAAESRAND--LTRIVASTKGIVFYGTPHHGNILLGAAEKLFRTTPAGRYMDPSVSRV----HLAELNGILAPGGAAAKIEILNFIEGSKVPLLWGGWGESTVIVPDADARLSREAGFVNDVDDRGNSRVSTAQAEHTPLPWRVNVVVEDRHHNDIHKPPKIEHVTFSFVRSYVARWLALRDDGG 1427
            D++ +HG+ G P  TW                     RG    +G     L +G C +P           R+L +++ A + G  G+     + A  +   L  AGVG +PVV++THS+GGL+ KE+L  A +   +     R+ ++T+G+VF+ TPH G+ L     KL     AGR   P+V  +    HL  LN  L     A  + +L+F+EG   PL   G+    V+VP    R S   GF       G+ R+                   +  H DI KP       ++   ++  R L L +DGG
Sbjct: 1122 DVVFIHGVRGGPFVTWR--------------------RGAVMSHGAARQSLSHGDC-WPSAWLAEDLPGARLLSIEYHAPVTGWEGESLSVPEKARRVLDKLTAAGVGQRPVVFVTHSMGGLMVKEMLSVALDDAQSGGPRARLASATRGVVFFATPHFGSRLASLGLKLRHVPGAGRAPAPAVHHLAPGPHLELLNERLRALHEAGHVAVLSFVEGQPTPL--AGFMPRVVVVP----RESAYPGF-------GSVRLQP-----------------ENDHIDICKPKGRGDPIYAETLAFARRALGLPEDGG 1384          
BLAST of mRNA_P-wetherbeei_contig5949.2.1 vs. uniprot
Match: A0A2U1KHY0_ARTAN (Armadillo-like helical n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1KHY0_ARTAN)

HSP 1 Score: 91.7 bits (226), Expect = 4.030e-15
Identity = 76/238 (31.93%), Postives = 116/238 (48.74%), Query Frame = 3
Query:  504 DFDADLILVHGLGGDP-NTWE-NEIPGHDKFQWIPFWLLDEMRGRNCCYGIYELLNGRCKYPDVPALPPARRVRVLVVKHGATL-KGTGDDADPQKIAINLAGALAEAGVGAKPVVWLTHSLGGLITKELLKFA-AESRANDLTRIVASTKGIVFYGTPHHGNILLGAAEKL---FRTTPAGRYMDPSVSRVHLAELNGILAPGGAAAKIEILNFIEGSKVPLL--WGGWGESTVIVP 1190
            D   D+I VHGL G P  TW  +E     K   +    +DE  G+   +   E L+G     D P        R+  +K+   L + +G     Q+++  L   L  AG+G +PVV++THS+GGL+ K++L  A AE+R N    +V +T G+VFY  PH G+ L     ++   FR  P+   +    +R  L ELN  L        +++L+F E    P++  +GGW     IVP
Sbjct:  777 DPSLDVIFVHGLRGGPFKTWRLSECKSSSKSGLVE--KIDEEAGKQGTFWPGEWLSG-----DFP------HARLFSLKYKTNLTQWSGSSLPLQEVSSMLLEKLIAAGIGDRPVVFVTHSMGGLVVKQMLHQASAENRGN----LVKNTVGVVFYSCPHFGSKLADMPWRMGYVFRPAPSIGELRSGSTR--LVELNDFLHDLHKKGSLDVLSFCETKVTPIVEGYGGWAFRMEIVP 995          
BLAST of mRNA_P-wetherbeei_contig5949.2.1 vs. uniprot
Match: A0A8J9RH65_9CHLO (Probable protein SERAC1 at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RH65_9CHLO)

HSP 1 Score: 91.3 bits (225), Expect = 5.090e-15
Identity = 80/257 (31.13%), Postives = 122/257 (47.47%), Query Frame = 3
Query:  516 DLILVHGLGGDPN-TWENE-IPG-------HDKFQWIPFWLLDEMRGRNCCYGIYELLNGRCKYPDVPALPPARRVRVLVVKHGATLKGTGDDADPQKIAIN-LAGALAEAGVGAKPVVWLTHSLGGLITKELL-KFAAESRANDLTRIVASTKGIVFYGTPHHGNIL--LGAAEKLFRTTPAGR--YMDPSVSRVHLAELNGILAPGGAAAKIEILNFIEG---SKVPLL-----------WGGWGESTVIVPDAD 1199
            D++ VHG+ G P  TW  E  PG       HD+  W   WL+D                      DVP        R+L +++ A   G    + P    +  L   L  AGVG +PVV++ HS+GG++ KE+L K A+E        ++ +T G+VFY TPHHG+ L  +G   +    +PA    ++ P     HL E+N ++     A ++E+L++ EG   S VP+L           + G+G  TV++PDAD
Sbjct:  702 DVVFVHGIRGGPFVTWRRERTPGVPAVSVVHDQC-WPSTWLVD----------------------DVPT------ARLLSMEYAAPASGWEGQSLPLWGTVGQLMDQLTAAGVGQRPVVFVCHSMGGILIKEMLAKSASEGAPRHHRALLDATAGLVFYATPHHGSWLADVGWNLRFLGASPASSVVHLKPGA---HLEEVNSVIRGLHEAGRLEVLSYCEGIPMSLVPVLPRLVVVPPESAFPGYGR-TVLLPDAD 925          
BLAST of mRNA_P-wetherbeei_contig5949.2.1 vs. uniprot
Match: A0A2G5EKU7_AQUCA (Uncharacterized protein n=3 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5EKU7_AQUCA)

HSP 1 Score: 91.3 bits (225), Expect = 5.770e-15
Identity = 70/235 (29.79%), Postives = 109/235 (46.38%), Query Frame = 3
Query:  513 ADLILVHGLGGDP-NTWENEIPGHDKFQWIP----FWLLDEMRGRNCCYGIYELLNGRCKYPDVPALPPARRVRVLVVKHGATL-KGTGDDADPQKIAINLAGALAEAGVGAKPVVWLTHSLGGLITKELLKFAAESRANDLTRIVASTKGIVFYGTPHHGNILLGAAEKL-FRTTPAGRYMDPSVSRVHLAELNGILAPGGAAAKIEILNFIEGSKVPLL--WGGWGESTVIVP 1190
             D++ +HGL G P  TW       DKF           +D+  G+   +   E L     Y            R+  VK+   L + +G     Q+++  L   L  AG+G +PVV++THS+GGL+ K++L    E+RAN+LT +V +T G+VFY  PH G+ L     ++     PA    +       L ELN  +        +++L+F E    P++  +GGW     IVP
Sbjct:  967 VDIVFIHGLRGGPFKTWR---VADDKFSTTSKSGLVEKIDQEAGKQGTFWPREWLAADFPY-----------ARLFTVKYKTNLTQWSGASLPLQEVSSMLLRKLVAAGIGNRPVVFVTHSMGGLVVKQMLY---EARANNLTSLVNNTAGVVFYSCPHFGSKLADMPWRMGLVLRPAPTIGELRSGSPRLVELNDFIRHLHKKGSLDVLSFSETKVTPIVEGYGGWAFRMEIVP 1184          
BLAST of mRNA_P-wetherbeei_contig5949.2.1 vs. uniprot
Match: A0A6L2N489_TANCI (Armadillo-like helical n=2 Tax=Magnoliopsida TaxID=3398 RepID=A0A6L2N489_TANCI)

HSP 1 Score: 91.3 bits (225), Expect = 6.650e-15
Identity = 76/238 (31.93%), Postives = 115/238 (48.32%), Query Frame = 3
Query:  504 DFDADLILVHGLGGDP-NTWE-NEIPGHDKFQWIPFWLLDEMRGRNCCYGIYELLNGRCKYPDVPALPPARRVRVLVVKHGATL-KGTGDDADPQKIAINLAGALAEAGVGAKPVVWLTHSLGGLITKELLKFA-AESRANDLTRIVASTKGIVFYGTPHHGNILLGAAEKL---FRTTPAGRYMDPSVSRVHLAELNGILAPGGAAAKIEILNFIEGSKVPLL--WGGWGESTVIVP 1190
            D   D+I VHGL G P  TW  +E     K   +    +DE  G+   +   E L+G     D P        R+  +K+   L + +G     Q+++  L   L  AG+G +PVV++THS+GGL+ KE+L  A AE+R N    +V +T G+VFY  PH G+ L     ++   FR  P+   +    +R  L ELN  +        + +L+F E    P++  +GGW     IVP
Sbjct:  908 DPSLDVIFVHGLRGGPFKTWRLSECKSSSKSGLVE--KIDEEAGKQGTFWPGEWLSG-----DFP------HARLFSLKYKTNLTQWSGSSLPLQEVSSMLLEKLIAAGIGDRPVVFVTHSMGGLVVKEMLHQASAENRGN----LVKNTVGVVFYSCPHFGSKLADMPWRMGYVFRPAPSIGELRSGSTR--LVELNDFIHDLHKQGSLNVLSFCETKVTPIVEGYGGWAFRMEIVP 1126          
BLAST of mRNA_P-wetherbeei_contig5949.2.1 vs. uniprot
Match: V7CRL0_PHAVU (Uncharacterized protein n=18 Tax=Phaseoleae TaxID=163735 RepID=V7CRL0_PHAVU)

HSP 1 Score: 90.1 bits (222), Expect = 1.290e-14
Identity = 73/232 (31.47%), Postives = 111/232 (47.84%), Query Frame = 3
Query:  516 DLILVHGLGGDP-NTWENEIPGHDKFQWIPFWL--LDEMRGRNCCYGIYELLNGRCKYPDVPALPPARRVRVLVVKHGATL-KGTGDDADPQKIAINLAGALAEAGVGAKPVVWLTHSLGGLITKELLKFAAESRANDLTRIVASTKGIVFYGTPHHGNILLGAAEKL-FRTTPAGRYMDPSVSRVHLAELNGILAPGGAAAKIEILNFIEGSKVPLL--WGGWGESTVIVP 1190
            D++ VHGL G P  TW       +K    P  +  +DE  G+   +   E L+      D P        R+  +K+   L + +G     Q+++  L   L  AGVG +PVV++THS+GGL+ K++L  A E R ++L   V +T GIVFY  PH G+ L     ++ F   PA    +       L ELN  +        +++L+F E    P++  +GGW   T IVP
Sbjct:  935 DIVFVHGLRGGPYKTWRI---AEEKISTSPHLVEKIDEEAGKLGTFWPGEWLSS-----DFP------EARMFTLKYKTNLTQWSGASLPLQEVSSMLLEKLVAAGVGNRPVVFVTHSMGGLVVKQILHKAKEERFDNL---VKNTMGIVFYSCPHFGSKLADMPWRMGFVLRPAPTIGELRSGSSRLIELNDYIRHLHKKGLLDVLSFCETKVTPIVEGYGGWAFRTEIVP 1149          
BLAST of mRNA_P-wetherbeei_contig5949.2.1 vs. uniprot
Match: A0A0D3A214_BRAOL (Uncharacterized protein n=16 Tax=Brassiceae TaxID=981071 RepID=A0A0D3A214_BRAOL)

HSP 1 Score: 89.7 bits (221), Expect = 1.700e-14
Identity = 73/252 (28.97%), Postives = 118/252 (46.83%), Query Frame = 3
Query:  453 SSLLQPMDRLSHPCDYRDFDADLILVHGLGGDP-NTWE-NEIPGHDKFQWIPFWLLDEMRGRNCCYGIYELLNGRCKYPDVPALPPARRVRVLVVKHGATL-KGTGDDADPQKIAINLAGALAEAGVGAKPVVWLTHSLGGLITKELLKFAAESRANDLTRIVASTKGIVFYGTPHHGNILLGAAEKL-FRTTPAGRYMDPSVSRVHLAELNGILAPGGAAAKIEILNFIEGSKVPLL--WGGWGESTVIVP 1190
            S L   MD  S      D + D+I +HGL G P  TW  +E     K   +    +D+  G+   +   E L+      D P      + R+  +K+   L + +G     Q+++  +   L  AG+G +PVV++THS+GGL+ K++L  A E +   L ++V +T G++FY  PH G+ L     ++     PA    +       L ELN +L        +E+L+F E    P++  +GGW     IVP
Sbjct:  917 SDLSSSMDPSSSGSRVHDPEFDVIFLHGLRGGPFKTWRISEDKSSTKSGLVE--KIDQEAGKLGTFWPSEWLSN-----DFP------QARLFTLKYKTNLTEWSGASLPLQEVSSMILEKLVSAGIGDRPVVFVTHSMGGLVVKQILHKAKEEK---LDKLVKNTAGVIFYSCPHFGSKLADMPWRMGLVLRPAPSIGELRSGSPRLVELNDLLRQLHKKGIVEVLSFCETKVTPIVEGYGGWAFRMEIVP 1152          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5949.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A819GVJ2_9BILA7.260e-4237.43Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 ... [more]
A0A814UZ82_9BILA5.460e-4132.98Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A816GR98_9BILA2.210e-2839.07Hypothetical protein n=1 Tax=Rotaria magnacalcarat... [more]
A0A2V0P6L5_9CHLO9.030e-1628.03Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A2U1KHY0_ARTAN4.030e-1531.93Armadillo-like helical n=2 Tax=Artemisia annua Tax... [more]
A0A8J9RH65_9CHLO5.090e-1531.13Probable protein SERAC1 at C-terminar half n=1 Tax... [more]
A0A2G5EKU7_AQUCA5.770e-1529.79Uncharacterized protein n=3 Tax=Thalictroideae Tax... [more]
A0A6L2N489_TANCI6.650e-1531.93Armadillo-like helical n=2 Tax=Magnoliopsida TaxID... [more]
V7CRL0_PHAVU1.290e-1431.47Uncharacterized protein n=18 Tax=Phaseoleae TaxID=... [more]
A0A0D3A214_BRAOL1.700e-1428.97Uncharacterized protein n=16 Tax=Brassiceae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5949contigP-wetherbeei_contig5949:718..3389 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog218851.Aquca_007_00597.1
Model size2672
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.59e-16
EggNOG OGsKOG2029@1|root,KOG2029@2759|Eukaryota,37RJ1@33090|Viridiplantae,3GH8N@35493|Streptophyta
Descriptionphosphatidylglycerol acyl-chain remodeling
Cds size2373
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186877.6182358-UTR-P-wetherbeei_contig5949:717..7521683186877.6182358-UTR-P-wetherbeei_contig5949:717..752Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5949 718..752 +
1683186877.6352172-UTR-P-wetherbeei_contig5949:3125..33891683186877.6352172-UTR-P-wetherbeei_contig5949:3125..3389Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5949 3126..3389 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186877.6272132-CDS-P-wetherbeei_contig5949:752..31251683186877.6272132-CDS-P-wetherbeei_contig5949:752..3125Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5949 753..3125 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5949.2.1prot_P-wetherbeei_contig5949.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5949 753..3125 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5949.2.1

>prot_P-wetherbeei_contig5949.2.1 ID=prot_P-wetherbeei_contig5949.2.1|Name=mRNA_P-wetherbeei_contig5949.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=791bp
MASAPLCIYHGQDLPVPEPRSVGGFFWKWKDMADAWVDSHVSAPRGQLFQ
LQRRQWAFGFVDRPFRILLLLDTGEQMVTLEAVSVQMARNALRALKLYVF
ETSDYSNGGGALRTRLATVKELPDFQYASLLDANTVRFPSSLLQPMDRLS
HPCDYRDFDADLILVHGLGGDPNTWENEIPGHDKFQWIPFWLLDEMRGRN
CCYGIYELLNGRCKYPDVPALPPARRVRVLVVKHGATLKGTGDDADPQKI
AINLAGALAEAGVGAKPVVWLTHSLGGLITKELLKFAAESRANDLTRIVA
STKGIVFYGTPHHGNILLGAAEKLFRTTPAGRYMDPSVSRVHLAELNGIL
APGGAAAKIEILNFIEGSKVPLLWGGWGESTVIVPDADARLSREAGFVND
VDDRGNSRVSTAQAEHTPLPWRVNVVVEDRHHNDIHKPPKIEHVTFSFVR
SYVARWLALRDDGGPGEREPRGGAQLRAQDGEGDESVGGRTQGDLPLYYQ
DNEALCFHVLGIVRLQLICFVALTLAHQQGAEDFPGIWSDHLMDSADHLA
RTVTSVEVLIRLQTERQLYMADAAKLLMAARRLGGGVVAYIAMIMAIVLV
AIINVTNVATAADPDATVTVRDGDPVSSNDTVAAALRSLQDGDARTNAIF
LERELQLSSVLRFFRELVVDDFQRILERRLPCQHHRAAVDEVVARAARVA
TSILSLPSGLNGLDSILLDPDRLQEVLDSRRALATVAAEMTLRMPAEVLA
AVSAVDSEPDALINFWALELRQENNIVRGALIDTATIRQH*
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mRNA from alignment at P-wetherbeei_contig5949:718..3389+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5949.2.1 ID=mRNA_P-wetherbeei_contig5949.2.1|Name=mRNA_P-wetherbeei_contig5949.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2672bp|location=Sequence derived from alignment at P-wetherbeei_contig5949:718..3389+ (Phaeothamnion wetherbeei SAG_119_79)
GTAAGAGCACCGCAGGAATGACATACTAGCAAACGATGGCAAGTGCCCCC TTGTGCATCTACCATGGCCAAGACCTCCCGGTTCCGGAACCGCGGAGTGT TGGAGGGTTTTTCTGGAAATGGAAGGATATGGCAGACGCCTGGGTAGACA GCCATGTCAGTGCGCCTAGAGGACAGCTATTTCAACTCCAGCGTCGCCAA TGGGCTTTCGGATTCGTTGATCGGCCTTTTCGCATCTTGCTGCTGCTTGA CACGGGAGAGCAGATGGTCACCCTGGAGGCCGTCAGCGTTCAGATGGCAA GGAATGCGCTGCGCGCCCTCAAGCTCTACGTCTTCGAAACCAGCGATTAC AGTAATGGCGGCGGTGCCTTACGCACCCGGCTGGCCACGGTCAAGGAACT CCCCGACTTCCAGTACGCCAGCCTGTTGGATGCGAACACCGTCCGCTTCC CTTCGTCCCTGCTTCAGCCCATGGACCGTCTGTCGCACCCTTGCGACTAC CGCGACTTTGACGCCGATCTCATCCTCGTGCACGGCCTCGGAGGGGATCC AAACACGTGGGAGAACGAGATCCCGGGCCACGACAAGTTCCAATGGATTC CTTTCTGGCTTCTTGACGAGATGCGCGGCCGAAACTGTTGTTATGGCATC TACGAGCTGTTGAACGGCCGCTGCAAGTACCCTGATGTGCCGGCATTGCC GCCGGCCCGCAGGGTCAGGGTGCTTGTGGTCAAACACGGGGCTACCCTGA AAGGCACCGGCGACGACGCCGACCCCCAAAAAATCGCGATCAACCTCGCC GGGGCGCTGGCGGAGGCTGGCGTAGGGGCGAAGCCTGTCGTATGGCTGAC ACATAGCCTCGGCGGCCTCATCACCAAGGAGCTTCTCAAATTTGCCGCGG AATCCAGAGCAAACGACCTTACCAGAATTGTGGCCAGCACCAAGGGCATC GTCTTTTACGGGACGCCGCACCACGGCAACATACTGCTCGGCGCGGCCGA AAAACTCTTTCGTACGACTCCCGCGGGGCGCTACATGGACCCCAGCGTCA GCCGCGTGCATCTCGCAGAGCTCAACGGCATTCTTGCCCCCGGCGGAGCG GCCGCTAAAATCGAGATTCTAAATTTCATCGAGGGCAGCAAAGTACCCTT GTTGTGGGGCGGCTGGGGTGAGAGCACAGTCATCGTACCAGATGCAGACG CCCGCCTCAGCCGCGAGGCCGGGTTTGTCAACGACGTCGACGACCGCGGC AACTCGAGGGTGTCGACGGCGCAAGCGGAGCACACGCCGCTGCCGTGGCG CGTCAATGTCGTGGTTGAGGACCGTCATCACAACGACATCCACAAGCCAC CCAAGATAGAGCATGTGACCTTCTCTTTCGTTCGCAGCTACGTTGCGCGA TGGCTCGCTCTTCGTGACGACGGCGGGCCTGGCGAACGGGAGCCGCGAGG CGGAGCGCAATTGCGCGCTCAAGACGGCGAGGGCGACGAGAGTGTGGGCG GAAGGACGCAAGGCGACCTCCCTCTCTATTACCAGGACAACGAGGCCCTC TGCTTTCACGTCTTGGGCATTGTGAGGCTTCAATTGATCTGTTTCGTCGC GCTCACGTTGGCGCATCAGCAAGGCGCCGAGGACTTCCCGGGAATATGGA GTGACCACTTGATGGACTCGGCCGACCACCTGGCGAGAACCGTAACGTCA GTAGAGGTATTGATCCGACTGCAAACGGAGCGCCAACTTTACATGGCGGA TGCCGCAAAACTGCTGATGGCGGCTCGTAGGTTGGGAGGCGGCGTGGTTG CCTACATTGCAATGATCATGGCTATCGTTTTAGTCGCGATCATCAACGTC ACAAACGTGGCCACGGCAGCTGACCCGGATGCAACGGTGACGGTGCGGGA TGGTGACCCCGTAAGCAGCAATGACACCGTGGCGGCTGCGTTGCGCTCGC TGCAAGATGGTGACGCGCGTACAAACGCCATCTTCCTGGAGCGAGAACTT CAGCTCTCTTCCGTCCTGCGTTTCTTTCGCGAGCTCGTCGTCGACGACTT CCAGCGCATCCTGGAACGGCGGCTGCCTTGTCAGCACCACCGGGCGGCCG TCGACGAGGTAGTCGCGCGGGCGGCGCGAGTTGCGACGAGCATCTTGTCG CTGCCGTCTGGTTTGAACGGCCTGGACTCCATTCTGTTGGACCCAGACCG CCTGCAGGAAGTGCTCGACTCTCGCCGTGCCCTGGCCACGGTGGCGGCAG AGATGACGCTGCGGATGCCTGCGGAGGTCCTTGCAGCTGTCAGTGCGGTC GACTCAGAACCGGATGCCTTAATCAACTTTTGGGCATTGGAACTTCGTCA GGAGAACAACATCGTCCGGGGCGCCCTGATCGACACGGCTACAATCAGGC AGCATTAAAGGATGGAGGCGCCGTCGCTGGTCGCTGCCTGCCGGCAGCTC TGGGTTGGTCTCGCCGTGTCCCAGGGGCCGCGTCGTCCCCGCGCGCGCGC CGGCACGTCAGACCGTCCCGGAGCATGCATACCATCAAGGACGCAGTTTT ATGATGCCGACTGCGGCAGCCGCGGCTTCGGCGGTAGCGTCGACGGCGGC GGCGGCGGCGGCAGCAGGCAACAACGGCAGTGAATGGTTTCACCTGTTAT TTTTAATTCACTTTTTTCTCAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5949:718..3389+

>mRNA_P-wetherbeei_contig5949.2.1 ID=mRNA_P-wetherbeei_contig5949.2.1|Name=mRNA_P-wetherbeei_contig5949.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2373bp|location=Sequence derived from alignment at P-wetherbeei_contig5949:718..3389+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAAGTGCCCCCTTGTGCATCTACCATGGCCAAGACCTCCCGGTTCC
GGAACCGCGGAGTGTTGGAGGGTTTTTCTGGAAATGGAAGGATATGGCAG
ACGCCTGGGTAGACAGCCATGTCAGTGCGCCTAGAGGACAGCTATTTCAA
CTCCAGCGTCGCCAATGGGCTTTCGGATTCGTTGATCGGCCTTTTCGCAT
CTTGCTGCTGCTTGACACGGGAGAGCAGATGGTCACCCTGGAGGCCGTCA
GCGTTCAGATGGCAAGGAATGCGCTGCGCGCCCTCAAGCTCTACGTCTTC
GAAACCAGCGATTACAGTAATGGCGGCGGTGCCTTACGCACCCGGCTGGC
CACGGTCAAGGAACTCCCCGACTTCCAGTACGCCAGCCTGTTGGATGCGA
ACACCGTCCGCTTCCCTTCGTCCCTGCTTCAGCCCATGGACCGTCTGTCG
CACCCTTGCGACTACCGCGACTTTGACGCCGATCTCATCCTCGTGCACGG
CCTCGGAGGGGATCCAAACACGTGGGAGAACGAGATCCCGGGCCACGACA
AGTTCCAATGGATTCCTTTCTGGCTTCTTGACGAGATGCGCGGCCGAAAC
TGTTGTTATGGCATCTACGAGCTGTTGAACGGCCGCTGCAAGTACCCTGA
TGTGCCGGCATTGCCGCCGGCCCGCAGGGTCAGGGTGCTTGTGGTCAAAC
ACGGGGCTACCCTGAAAGGCACCGGCGACGACGCCGACCCCCAAAAAATC
GCGATCAACCTCGCCGGGGCGCTGGCGGAGGCTGGCGTAGGGGCGAAGCC
TGTCGTATGGCTGACACATAGCCTCGGCGGCCTCATCACCAAGGAGCTTC
TCAAATTTGCCGCGGAATCCAGAGCAAACGACCTTACCAGAATTGTGGCC
AGCACCAAGGGCATCGTCTTTTACGGGACGCCGCACCACGGCAACATACT
GCTCGGCGCGGCCGAAAAACTCTTTCGTACGACTCCCGCGGGGCGCTACA
TGGACCCCAGCGTCAGCCGCGTGCATCTCGCAGAGCTCAACGGCATTCTT
GCCCCCGGCGGAGCGGCCGCTAAAATCGAGATTCTAAATTTCATCGAGGG
CAGCAAAGTACCCTTGTTGTGGGGCGGCTGGGGTGAGAGCACAGTCATCG
TACCAGATGCAGACGCCCGCCTCAGCCGCGAGGCCGGGTTTGTCAACGAC
GTCGACGACCGCGGCAACTCGAGGGTGTCGACGGCGCAAGCGGAGCACAC
GCCGCTGCCGTGGCGCGTCAATGTCGTGGTTGAGGACCGTCATCACAACG
ACATCCACAAGCCACCCAAGATAGAGCATGTGACCTTCTCTTTCGTTCGC
AGCTACGTTGCGCGATGGCTCGCTCTTCGTGACGACGGCGGGCCTGGCGA
ACGGGAGCCGCGAGGCGGAGCGCAATTGCGCGCTCAAGACGGCGAGGGCG
ACGAGAGTGTGGGCGGAAGGACGCAAGGCGACCTCCCTCTCTATTACCAG
GACAACGAGGCCCTCTGCTTTCACGTCTTGGGCATTGTGAGGCTTCAATT
GATCTGTTTCGTCGCGCTCACGTTGGCGCATCAGCAAGGCGCCGAGGACT
TCCCGGGAATATGGAGTGACCACTTGATGGACTCGGCCGACCACCTGGCG
AGAACCGTAACGTCAGTAGAGGTATTGATCCGACTGCAAACGGAGCGCCA
ACTTTACATGGCGGATGCCGCAAAACTGCTGATGGCGGCTCGTAGGTTGG
GAGGCGGCGTGGTTGCCTACATTGCAATGATCATGGCTATCGTTTTAGTC
GCGATCATCAACGTCACAAACGTGGCCACGGCAGCTGACCCGGATGCAAC
GGTGACGGTGCGGGATGGTGACCCCGTAAGCAGCAATGACACCGTGGCGG
CTGCGTTGCGCTCGCTGCAAGATGGTGACGCGCGTACAAACGCCATCTTC
CTGGAGCGAGAACTTCAGCTCTCTTCCGTCCTGCGTTTCTTTCGCGAGCT
CGTCGTCGACGACTTCCAGCGCATCCTGGAACGGCGGCTGCCTTGTCAGC
ACCACCGGGCGGCCGTCGACGAGGTAGTCGCGCGGGCGGCGCGAGTTGCG
ACGAGCATCTTGTCGCTGCCGTCTGGTTTGAACGGCCTGGACTCCATTCT
GTTGGACCCAGACCGCCTGCAGGAAGTGCTCGACTCTCGCCGTGCCCTGG
CCACGGTGGCGGCAGAGATGACGCTGCGGATGCCTGCGGAGGTCCTTGCA
GCTGTCAGTGCGGTCGACTCAGAACCGGATGCCTTAATCAACTTTTGGGC
ATTGGAACTTCGTCAGGAGAACAACATCGTCCGGGGCGCCCTGATCGACA
CGGCTACAATCAGGCAGCATTAA
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